Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0124

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
138,552	+				-0.6
138,556	+				+0.1
139,049	+		Shewana3_0123	0.65	+0.7
139,199	-				-0.8
139,204	+				+0.4
139,268	-				-1.6
139,319	+				-0.0
139,627	+				-0.0
139,728	-				-1.9
139,762	+				+0.5
139,781	+				-0.2
139,793	+				-0.3
139,803	+				-0.1
139,811	-		Shewana3_0124	0.10	-0.7
139,849	+		Shewana3_0124	0.12	-0.3
139,857	-		Shewana3_0124	0.12	+0.0
139,898	+		Shewana3_0124	0.13	+0.0
139,907	-		Shewana3_0124	0.14	-0.6
140,015	+		Shewana3_0124	0.18	+0.1
140,053	+		Shewana3_0124	0.20	+0.3
140,053	+		Shewana3_0124	0.20	-0.4
140,083	-		Shewana3_0124	0.21	-0.4
140,085	+		Shewana3_0124	0.21	+0.2
140,124	+		Shewana3_0124	0.22	+0.6
140,207	+		Shewana3_0124	0.26	+0.5
140,214	-		Shewana3_0124	0.26	-1.2
140,422	-		Shewana3_0124	0.34	-2.7
140,440	+		Shewana3_0124	0.35	-0.5
140,440	+		Shewana3_0124	0.35	-0.1
140,448	-		Shewana3_0124	0.35	-0.3
140,448	-		Shewana3_0124	0.35	-0.4
140,563	-		Shewana3_0124	0.39	-3.0
140,865	+		Shewana3_0124	0.51	+0.4
140,905	-		Shewana3_0124	0.53	-1.9
141,138	+		Shewana3_0124	0.62	+0.0
141,264	-		Shewana3_0124	0.67	-0.2
141,551	-		Shewana3_0124	0.78	-1.9
141,605	+		Shewana3_0124	0.80	-1.4
141,669	+		Shewana3_0124	0.82	+0.6
141,858	+		Shewana3_0124	0.90	+0.1
141,938	+				+0.8
141,938	+				+0.3
141,978	-				-0.3
141,994	+				+0.3
141,994	+				+1.1
142,002	-				-0.1
142,002	-				-0.0
142,044	-				-0.2
142,060	+				+0.3
142,172	+				-1.1
142,180	-				+0.2
142,187	-				+0.5
142,393	+		Shewana3_0125	0.37	-1.5
142,508	+		Shewana3_0125	0.57	-0.5
142,508	+		Shewana3_0125	0.57	-1.8
142,516	-		Shewana3_0125	0.58	+0.5
142,576	-		Shewana3_0125	0.69	-0.1
142,663	+		Shewana3_0125	0.84	-0.0
142,730	+				-0.5
142,737	-				-0.5
142,837	+				+0.0
142,889	+				+0.1
142,949	-		Shewana3_0126	0.24	-0.7
143,019	+		Shewana3_0126	0.41	+0.5