Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4225

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_4223 and Shewana3_4224 are separated by 120 nucleotidesShewana3_4224 and Shewana3_4225 are separated by 623 nucleotidesShewana3_4225 and Shewana3_4226 overlap by 11 nucleotides Shewana3_4223: Shewana3_4223 - hypothetical protein (RefSeq), at 95,440 to 96,366 _4223 Shewana3_4224: Shewana3_4224 - hypothetical protein (RefSeq), at 96,487 to 96,696 _4224 Shewana3_4225: Shewana3_4225 - hypothetical protein (RefSeq), at 97,320 to 98,393 _4225 Shewana3_4226: Shewana3_4226 - cobyrinic acid a,c-diamide synthase (RefSeq), at 98,383 to 99,600 _4226 Position (kb) 97 98 99Strain fitness (log2 ratio) -1 0 1at 96.864 kb on + strandat 96.864 kb on + strandat 97.205 kb on + strandat 97.205 kb on + strandat 97.213 kb on - strandat 97.252 kb on - strandat 97.292 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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96,864 + -1.0
96,864 + +0.7
97,205 + -1.4
97,205 + -0.6
97,213 - +0.9
97,252 - +0.8
97,292 - -0.6

Or see this region's nucleotide sequence