Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4183
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 48,385 | + | Shewana3_4182 | 0.18 | -0.9 | |
| 48,474 | - | Shewana3_4182 | 0.31 | -0.6 | |
| 48,609 | - | Shewana3_4182 | 0.50 | -1.3 | |
| 48,644 | + | Shewana3_4182 | 0.55 | -0.6 | |
| 48,652 | - | Shewana3_4182 | 0.56 | -2.0 | |
| 48,992 | - | -0.2 | |||
| 49,174 | - | Shewana3_4183 | 0.27 | -0.1 | |
| 49,266 | - | Shewana3_4183 | 0.45 | -0.8 | |
| 49,268 | + | Shewana3_4183 | 0.45 | +0.1 | |
| 49,273 | + | Shewana3_4183 | 0.46 | -0.2 | |
| 49,276 | - | Shewana3_4183 | 0.47 | -1.8 | |
| 49,281 | - | Shewana3_4183 | 0.47 | -0.4 | |
| 49,300 | - | Shewana3_4183 | 0.51 | -0.4 | |
| 49,459 | + | Shewana3_4183 | 0.81 | -0.8 | |
| 49,469 | + | Shewana3_4183 | 0.83 | -0.3 | |
| 49,541 | + | -0.8 |
Or see this region's nucleotide sequence