Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3685 and Shew_3686 overlap by 17 nucleotides Shew_3686 and Shew_3687 are separated by 14 nucleotides Shew_3687 and Shew_3688 are separated by 59 nucleotides
Shew_3685: Shew_3685 - ABC transporter-related protein (RefSeq), at 4,389,345 to 4,390,061
_3685
Shew_3686: Shew_3686 - molybdopterin-guanine dinucleotide biosynthesis protein A (RefSeq), at 4,390,045 to 4,390,635
_3686
Shew_3687: Shew_3687 - molybdopterin-guanine dinucleotide biosynthesis protein B (RefSeq), at 4,390,650 to 4,392,449
_3687
Shew_3688: Shew_3688 - molybdenum cofactor biosynthesis protein A (RefSeq), at 4,392,509 to 4,393,495
_3688
Position (kb)
4390
4391
4392
4393 Strain fitness (log2 ratio)
-1
0
1
2 at 4389.716 kb on + strand, within Shew_3685 at 4389.809 kb on - strand, within Shew_3685 at 4389.929 kb on - strand, within Shew_3685 at 4390.248 kb on - strand, within Shew_3686 at 4390.248 kb on - strand, within Shew_3686 at 4390.480 kb on + strand, within Shew_3686 at 4390.531 kb on + strand, within Shew_3686 at 4390.574 kb on - strand, within Shew_3686 at 4390.574 kb on - strand, within Shew_3686 at 4390.652 kb on - strand at 4390.659 kb on + strand at 4390.802 kb on - strand at 4390.972 kb on - strand, within Shew_3687 at 4391.006 kb on + strand, within Shew_3687 at 4391.016 kb on + strand, within Shew_3687 at 4391.516 kb on + strand, within Shew_3687 at 4391.670 kb on + strand, within Shew_3687 at 4391.875 kb on + strand, within Shew_3687 at 4391.875 kb on + strand, within Shew_3687 at 4391.932 kb on - strand, within Shew_3687 at 4392.127 kb on - strand, within Shew_3687 at 4392.133 kb on - strand, within Shew_3687 at 4392.133 kb on - strand, within Shew_3687 at 4392.316 kb on + strand at 4392.337 kb on - strand at 4392.341 kb on + strand at 4392.431 kb on - strand at 4392.642 kb on + strand, within Shew_3688 at 4392.660 kb on + strand, within Shew_3688 at 4392.845 kb on + strand, within Shew_3688 at 4392.907 kb on - strand, within Shew_3688 at 4392.963 kb on + strand, within Shew_3688 at 4393.091 kb on - strand, within Shew_3688 at 4393.235 kb on - strand, within Shew_3688 at 4393.238 kb on + strand, within Shew_3688
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 4,389,716 + Shew_3685 0.52 +0.9 4,389,809 - Shew_3685 0.65 +0.5 4,389,929 - Shew_3685 0.81 +1.1 4,390,248 - Shew_3686 0.34 +0.7 4,390,248 - Shew_3686 0.34 +1.8 4,390,480 + Shew_3686 0.74 +1.7 4,390,531 + Shew_3686 0.82 +1.3 4,390,574 - Shew_3686 0.90 +0.1 4,390,574 - Shew_3686 0.90 +1.1 4,390,652 - +1.8 4,390,659 + +2.1 4,390,802 - +1.8 4,390,972 - Shew_3687 0.18 +1.7 4,391,006 + Shew_3687 0.20 +1.6 4,391,016 + Shew_3687 0.20 +1.3 4,391,516 + Shew_3687 0.48 +1.5 4,391,670 + Shew_3687 0.57 +1.1 4,391,875 + Shew_3687 0.68 +1.4 4,391,875 + Shew_3687 0.68 +2.0 4,391,932 - Shew_3687 0.71 +1.9 4,392,127 - Shew_3687 0.82 +1.5 4,392,133 - Shew_3687 0.82 +1.1 4,392,133 - Shew_3687 0.82 +1.3 4,392,316 + +1.0 4,392,337 - +0.3 4,392,341 + +1.8 4,392,431 - +1.3 4,392,642 + Shew_3688 0.13 +0.6 4,392,660 + Shew_3688 0.15 +0.2 4,392,845 + Shew_3688 0.34 -0.6 4,392,907 - Shew_3688 0.40 -0.3 4,392,963 + Shew_3688 0.46 -0.8 4,393,091 - Shew_3688 0.59 +0.2 4,393,235 - Shew_3688 0.74 +0.3 4,393,238 + Shew_3688 0.74 +0.6
Or see this region's nucleotide sequence