Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2784 and Shew_2785 are separated by 232 nucleotides Shew_2785 and Shew_2786 are separated by 100 nucleotides Shew_2786 and Shew_2787 are separated by 196 nucleotides
Shew_2784: Shew_2784 - phosphoesterase, PA-phosphatase related (RefSeq), at 3,294,030 to 3,295,358
_2784
Shew_2785: Shew_2785 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq), at 3,295,591 to 3,295,848
_2785
Shew_2786: Shew_2786 - sterol-binding domain-containing protein (RefSeq), at 3,295,949 to 3,296,461
_2786
Shew_2787: Shew_2787 - peptidase U32 (RefSeq), at 3,296,658 to 3,297,659
_2787
Position (kb) 3295
3296 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3294.593 kb on + strand, within Shew_2784 at 3294.768 kb on + strand, within Shew_2784 at 3294.802 kb on + strand, within Shew_2784 at 3295.019 kb on + strand, within Shew_2784 at 3295.244 kb on + strand at 3295.254 kb on + strand at 3295.260 kb on + strand at 3295.720 kb on + strand, within Shew_2785 at 3295.912 kb on + strand at 3295.934 kb on + strand at 3296.232 kb on + strand, within Shew_2786 at 3296.310 kb on + strand, within Shew_2786
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 3,294,593 + Shew_2784 0.42 +0.2 3,294,768 + Shew_2784 0.56 +0.2 3,294,802 + Shew_2784 0.58 +1.0 3,295,019 + Shew_2784 0.74 +0.8 3,295,244 + +0.5 3,295,254 + +0.2 3,295,260 + -2.0 3,295,720 + Shew_2785 0.50 -3.4 3,295,912 + +0.1 3,295,934 + +0.9 3,296,232 + Shew_2786 0.55 -0.6 3,296,310 + Shew_2786 0.70 +0.6
Or see this region's nucleotide sequence