Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2664 and Shew_2665 overlap by 1 nucleotides Shew_2665 and Shew_2666 overlap by 4 nucleotides
Shew_2664: Shew_2664 - transcriptional regulator, putative (RefSeq), at 3,139,363 to 3,140,217
_2664
Shew_2665: Shew_2665 - beta-ketoacyl synthase (RefSeq), at 3,140,217 to 3,148,076
_2665
Shew_2666: Shew_2666 - omega-3 polyunsaturated fatty acid synthase PfaB (RefSeq), at 3,148,073 to 3,150,223
_2666
Position (kb)
3140
3141
3142
3143
3144
3145
3146
3147
3148
3149 Strain fitness (log2 ratio)
-1
0
1
2 at 3139.610 kb on - strand, within Shew_2664 at 3139.659 kb on + strand, within Shew_2664 at 3139.683 kb on + strand, within Shew_2664 at 3139.709 kb on + strand, within Shew_2664 at 3139.920 kb on - strand, within Shew_2664 at 3139.942 kb on - strand, within Shew_2664 at 3140.157 kb on + strand at 3140.544 kb on - strand at 3141.009 kb on + strand, within Shew_2665 at 3141.262 kb on + strand, within Shew_2665 at 3141.272 kb on + strand, within Shew_2665 at 3141.432 kb on - strand, within Shew_2665 at 3141.982 kb on + strand, within Shew_2665 at 3141.990 kb on - strand, within Shew_2665 at 3141.991 kb on - strand, within Shew_2665 at 3142.033 kb on - strand, within Shew_2665 at 3142.141 kb on - strand, within Shew_2665 at 3142.158 kb on + strand, within Shew_2665 at 3142.188 kb on - strand, within Shew_2665 at 3142.721 kb on - strand, within Shew_2665 at 3142.814 kb on + strand, within Shew_2665 at 3142.954 kb on - strand, within Shew_2665 at 3142.954 kb on - strand, within Shew_2665 at 3143.165 kb on - strand, within Shew_2665 at 3143.285 kb on + strand, within Shew_2665 at 3143.461 kb on - strand, within Shew_2665 at 3143.803 kb on + strand, within Shew_2665 at 3143.859 kb on - strand, within Shew_2665 at 3143.886 kb on - strand, within Shew_2665 at 3144.202 kb on + strand, within Shew_2665 at 3144.684 kb on + strand, within Shew_2665 at 3144.747 kb on - strand, within Shew_2665 at 3145.052 kb on - strand, within Shew_2665 at 3145.344 kb on + strand, within Shew_2665 at 3145.477 kb on + strand, within Shew_2665 at 3145.728 kb on + strand, within Shew_2665 at 3145.790 kb on + strand, within Shew_2665 at 3145.807 kb on + strand, within Shew_2665 at 3145.849 kb on - strand, within Shew_2665 at 3146.444 kb on + strand, within Shew_2665 at 3146.469 kb on - strand, within Shew_2665 at 3146.647 kb on + strand, within Shew_2665 at 3147.361 kb on + strand at 3147.361 kb on + strand at 3147.369 kb on - strand at 3147.409 kb on + strand at 3147.409 kb on + strand at 3147.417 kb on - strand at 3147.427 kb on + strand at 3147.435 kb on - strand at 3147.693 kb on - strand at 3147.735 kb on + strand at 3147.735 kb on + strand at 3147.743 kb on - strand at 3148.261 kb on + strand at 3148.435 kb on - strand, within Shew_2666 at 3148.435 kb on - strand, within Shew_2666 at 3148.440 kb on - strand, within Shew_2666 at 3148.464 kb on - strand, within Shew_2666 at 3149.004 kb on - strand, within Shew_2666
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 3,139,610 - Shew_2664 0.29 +0.6 3,139,659 + Shew_2664 0.35 +1.6 3,139,683 + Shew_2664 0.37 +1.2 3,139,709 + Shew_2664 0.40 +1.4 3,139,920 - Shew_2664 0.65 +1.2 3,139,942 - Shew_2664 0.68 +2.0 3,140,157 + +0.7 3,140,544 - +1.0 3,141,009 + Shew_2665 0.10 +1.7 3,141,262 + Shew_2665 0.13 +1.2 3,141,272 + Shew_2665 0.13 +1.1 3,141,432 - Shew_2665 0.15 +1.5 3,141,982 + Shew_2665 0.22 +0.8 3,141,990 - Shew_2665 0.23 +1.4 3,141,991 - Shew_2665 0.23 +1.2 3,142,033 - Shew_2665 0.23 +1.2 3,142,141 - Shew_2665 0.24 +0.5 3,142,158 + Shew_2665 0.25 +1.5 3,142,188 - Shew_2665 0.25 +0.6 3,142,721 - Shew_2665 0.32 +0.9 3,142,814 + Shew_2665 0.33 +0.5 3,142,954 - Shew_2665 0.35 +0.4 3,142,954 - Shew_2665 0.35 +0.9 3,143,165 - Shew_2665 0.38 +0.9 3,143,285 + Shew_2665 0.39 +0.6 3,143,461 - Shew_2665 0.41 +0.6 3,143,803 + Shew_2665 0.46 +0.8 3,143,859 - Shew_2665 0.46 +1.1 3,143,886 - Shew_2665 0.47 +0.7 3,144,202 + Shew_2665 0.51 +1.4 3,144,684 + Shew_2665 0.57 +1.1 3,144,747 - Shew_2665 0.58 +0.1 3,145,052 - Shew_2665 0.62 +1.8 3,145,344 + Shew_2665 0.65 +0.7 3,145,477 + Shew_2665 0.67 +0.6 3,145,728 + Shew_2665 0.70 +1.4 3,145,790 + Shew_2665 0.71 +0.4 3,145,807 + Shew_2665 0.71 +1.3 3,145,849 - Shew_2665 0.72 +1.9 3,146,444 + Shew_2665 0.79 -0.9 3,146,469 - Shew_2665 0.80 +0.5 3,146,647 + Shew_2665 0.82 +1.1 3,147,361 + +0.8 3,147,361 + +0.0 3,147,369 - +1.7 3,147,409 + +1.3 3,147,409 + +1.7 3,147,417 - +1.0 3,147,427 + -0.5 3,147,435 - +0.5 3,147,693 - +0.8 3,147,735 + +2.2 3,147,735 + +1.6 3,147,743 - +0.5 3,148,261 + +0.9 3,148,435 - Shew_2666 0.17 +1.3 3,148,435 - Shew_2666 0.17 +0.6 3,148,440 - Shew_2666 0.17 +1.0 3,148,464 - Shew_2666 0.18 +0.8 3,149,004 - Shew_2666 0.43 +0.8
Or see this region's nucleotide sequence