Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0656 and Shew_0657 are separated by 174 nucleotides Shew_0657 and Shew_0658 are separated by 291 nucleotides
Shew_0656: Shew_0656 - anaerobic nitric oxide reductase transcription regulator (RefSeq), at 743,996 to 745,531
_0656
Shew_0657: Shew_0657 - putative nitric oxide reductase (subunit B) transmembrane protein (RefSeq), at 745,706 to 747,997
_0657
Shew_0658: Shew_0658 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase (RefSeq), at 748,289 to 749,215
_0658
Position (kb) 745
746
747
748 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 744.773 kb on + strand, within Shew_0656 at 744.922 kb on + strand, within Shew_0656 at 745.193 kb on + strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.308 kb on - strand, within Shew_0656 at 745.969 kb on - strand, within Shew_0657 at 746.001 kb on + strand, within Shew_0657 at 746.009 kb on - strand, within Shew_0657 at 746.282 kb on - strand, within Shew_0657 at 746.419 kb on + strand, within Shew_0657 at 746.561 kb on + strand, within Shew_0657 at 746.610 kb on + strand, within Shew_0657 at 746.618 kb on - strand, within Shew_0657 at 746.835 kb on - strand, within Shew_0657 at 746.935 kb on + strand, within Shew_0657 at 746.943 kb on + strand, within Shew_0657 at 746.956 kb on - strand, within Shew_0657 at 747.286 kb on + strand, within Shew_0657 at 747.443 kb on + strand, within Shew_0657 at 747.484 kb on + strand, within Shew_0657 at 747.719 kb on - strand, within Shew_0657 at 747.751 kb on + strand, within Shew_0657 at 747.934 kb on + strand at 748.029 kb on + strand at 748.215 kb on - strand at 748.820 kb on + strand, within Shew_0658 at 748.946 kb on - strand, within Shew_0658
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 744,773 + Shew_0656 0.51 +0.2 744,922 + Shew_0656 0.60 -0.8 745,193 + Shew_0656 0.78 +0.1 745,308 - Shew_0656 0.85 +0.1 745,308 - Shew_0656 0.85 +0.3 745,308 - Shew_0656 0.85 -1.5 745,969 - Shew_0657 0.11 -0.5 746,001 + Shew_0657 0.13 -0.4 746,009 - Shew_0657 0.13 -0.5 746,282 - Shew_0657 0.25 -0.2 746,419 + Shew_0657 0.31 +0.3 746,561 + Shew_0657 0.37 -2.6 746,610 + Shew_0657 0.39 +1.2 746,618 - Shew_0657 0.40 -3.1 746,835 - Shew_0657 0.49 -0.4 746,935 + Shew_0657 0.54 -0.0 746,943 + Shew_0657 0.54 -0.1 746,956 - Shew_0657 0.55 -0.9 747,286 + Shew_0657 0.69 -0.3 747,443 + Shew_0657 0.76 +0.0 747,484 + Shew_0657 0.78 +0.1 747,719 - Shew_0657 0.88 -2.9 747,751 + Shew_0657 0.89 +0.1 747,934 + -0.2 748,029 + +1.5 748,215 - +1.4 748,820 + Shew_0658 0.57 -0.3 748,946 - Shew_0658 0.71 -3.1
Or see this region's nucleotide sequence