Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0091 and Shew_0092 are separated by 33 nucleotides Shew_0092 and Shew_0093 overlap by 1 nucleotides Shew_0093 and Shew_0094 overlap by 20 nucleotides
Shew_0091: Shew_0091 - molybdopterin biosynthesis MoaE (RefSeq), at 103,983 to 104,450
_0091
Shew_0092: Shew_0092 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 104,484 to 105,308
_0092
Shew_0093: Shew_0093 - molybdate ABC transporter, inner membrane subunit (RefSeq), at 105,308 to 105,988
_0093
Shew_0094: Shew_0094 - ABC transporter-related protein (RefSeq), at 105,969 to 107,078
_0094
Position (kb) 105
106 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 104.505 kb on + strand at 104.513 kb on - strand at 104.535 kb on + strand at 104.538 kb on - strand at 104.863 kb on + strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.105 kb on + strand, within Shew_0092 at 105.356 kb on - strand at 105.424 kb on + strand, within Shew_0093 at 105.442 kb on + strand, within Shew_0093 at 105.481 kb on - strand, within Shew_0093 at 105.505 kb on - strand, within Shew_0093 at 105.585 kb on + strand, within Shew_0093 at 105.593 kb on - strand, within Shew_0093 at 105.721 kb on - strand, within Shew_0093 at 105.765 kb on + strand, within Shew_0093 at 105.773 kb on - strand, within Shew_0093 at 105.934 kb on + strand at 106.087 kb on + strand, within Shew_0094 at 106.098 kb on + strand, within Shew_0094 at 106.137 kb on - strand, within Shew_0094 at 106.265 kb on + strand, within Shew_0094 at 106.303 kb on - strand, within Shew_0094 at 106.364 kb on - strand, within Shew_0094 at 106.407 kb on + strand, within Shew_0094 at 106.412 kb on + strand, within Shew_0094 at 106.415 kb on - strand, within Shew_0094 at 106.415 kb on - strand, within Shew_0094 at 106.420 kb on - strand, within Shew_0094 at 106.420 kb on - strand, within Shew_0094 at 106.607 kb on + strand, within Shew_0094 at 106.628 kb on - strand, within Shew_0094 at 106.641 kb on + strand, within Shew_0094 at 106.641 kb on + strand, within Shew_0094 at 106.641 kb on + strand, within Shew_0094 at 106.909 kb on + strand, within Shew_0094 at 106.975 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 104,505 + -3.1 104,513 - -2.7 104,535 + -4.9 104,538 - -4.4 104,863 + Shew_0092 0.46 -2.9 105,010 - Shew_0092 0.64 -4.8 105,010 - Shew_0092 0.64 -2.7 105,105 + Shew_0092 0.75 -5.2 105,356 - -2.9 105,424 + Shew_0093 0.17 -3.3 105,442 + Shew_0093 0.20 -5.3 105,481 - Shew_0093 0.25 -2.4 105,505 - Shew_0093 0.29 -3.5 105,585 + Shew_0093 0.41 -3.0 105,593 - Shew_0093 0.42 -4.5 105,721 - Shew_0093 0.61 -3.1 105,765 + Shew_0093 0.67 -3.6 105,773 - Shew_0093 0.68 -4.2 105,934 + -2.6 106,087 + Shew_0094 0.11 -4.6 106,098 + Shew_0094 0.12 -4.6 106,137 - Shew_0094 0.15 -3.3 106,265 + Shew_0094 0.27 -3.1 106,303 - Shew_0094 0.30 -3.9 106,364 - Shew_0094 0.36 -4.3 106,407 + Shew_0094 0.39 -3.2 106,412 + Shew_0094 0.40 -3.8 106,415 - Shew_0094 0.40 -5.7 106,415 - Shew_0094 0.40 -1.9 106,420 - Shew_0094 0.41 -3.9 106,420 - Shew_0094 0.41 -4.9 106,607 + Shew_0094 0.57 -3.5 106,628 - Shew_0094 0.59 -3.2 106,641 + Shew_0094 0.61 -3.3 106,641 + Shew_0094 0.61 -4.1 106,641 + Shew_0094 0.61 -2.1 106,909 + Shew_0094 0.85 -2.4 106,975 - -2.9
Or see this region's nucleotide sequence