Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_714 and Pf6N2E2_715 are separated by 25 nucleotides Pf6N2E2_715 and Pf6N2E2_716 are separated by 73 nucleotides Pf6N2E2_716 and Pf6N2E2_717 are separated by 160 nucleotides
Pf6N2E2_714 - NnrS protein involved in response to NO, at 818,156 to 819,346
_714
Pf6N2E2_715 - putative membrane protein, at 819,372 to 819,809
_715
Pf6N2E2_716 - Nitric oxide-dependent regulator DnrN or NorA, at 819,883 to 820,557
_716
Pf6N2E2_717 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 820,718 to 822,250
_717
Position (kb) 819
820 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 818.588 kb on + strand, within Pf6N2E2_714 at 818.604 kb on + strand, within Pf6N2E2_714 at 818.604 kb on + strand, within Pf6N2E2_714 at 818.605 kb on - strand, within Pf6N2E2_714 at 818.640 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.847 kb on - strand, within Pf6N2E2_714 at 818.990 kb on + strand, within Pf6N2E2_714 at 819.285 kb on + strand at 819.286 kb on - strand at 819.287 kb on + strand at 819.287 kb on + strand at 819.287 kb on + strand at 819.288 kb on - strand at 819.376 kb on - strand at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.691 kb on - strand, within Pf6N2E2_715 at 819.795 kb on + strand at 819.795 kb on + strand at 819.795 kb on + strand at 819.796 kb on - strand at 819.864 kb on - strand at 819.978 kb on - strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.491 kb on + strand at 820.491 kb on + strand at 820.714 kb on + strand at 820.714 kb on + strand at 820.805 kb on + strand at 820.806 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 818,588 + Pf6N2E2_714 0.36 +0.3 818,604 + Pf6N2E2_714 0.38 +0.5 818,604 + Pf6N2E2_714 0.38 -0.8 818,605 - Pf6N2E2_714 0.38 +0.2 818,640 + Pf6N2E2_714 0.41 +0.6 818,846 + Pf6N2E2_714 0.58 +0.4 818,846 + Pf6N2E2_714 0.58 +0.7 818,846 + Pf6N2E2_714 0.58 +0.4 818,846 + Pf6N2E2_714 0.58 -3.4 818,847 - Pf6N2E2_714 0.58 +0.2 818,990 + Pf6N2E2_714 0.70 +0.3 819,285 + +0.3 819,286 - -2.4 819,287 + +1.1 819,287 + +0.9 819,287 + -0.6 819,288 - +0.0 819,376 - +2.0 819,676 - Pf6N2E2_715 0.69 -0.3 819,676 - Pf6N2E2_715 0.69 -1.0 819,676 - Pf6N2E2_715 0.69 -1.0 819,676 - Pf6N2E2_715 0.69 -0.8 819,690 + Pf6N2E2_715 0.73 +0.3 819,690 + Pf6N2E2_715 0.73 -0.2 819,690 + Pf6N2E2_715 0.73 -2.2 819,691 - Pf6N2E2_715 0.73 -1.7 819,795 + -0.3 819,795 + +0.6 819,795 + -1.5 819,796 - +0.0 819,864 - +0.1 819,978 - Pf6N2E2_716 0.14 +0.2 820,181 + Pf6N2E2_716 0.44 +0.9 820,181 + Pf6N2E2_716 0.44 -0.4 820,181 + Pf6N2E2_716 0.44 +0.3 820,181 + Pf6N2E2_716 0.44 +1.6 820,182 - Pf6N2E2_716 0.44 +1.0 820,182 - Pf6N2E2_716 0.44 -0.6 820,182 - Pf6N2E2_716 0.44 +1.7 820,182 - Pf6N2E2_716 0.44 -1.1 820,478 + Pf6N2E2_716 0.88 -1.3 820,478 + Pf6N2E2_716 0.88 +0.0 820,478 + Pf6N2E2_716 0.88 +1.5 820,478 + Pf6N2E2_716 0.88 +0.8 820,478 + Pf6N2E2_716 0.88 +0.3 820,479 - Pf6N2E2_716 0.88 -0.0 820,479 - Pf6N2E2_716 0.88 +0.0 820,479 - Pf6N2E2_716 0.88 +0.8 820,491 + -0.2 820,491 + +0.2 820,714 + +0.0 820,714 + -0.8 820,805 + +0.1 820,806 - +1.8
Or see this region's nucleotide sequence