Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5660

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
6,471,773	+				-0.6
6,471,774	-				+0.1
6,471,790	+				+0.4
6,471,790	+				+0.7
6,471,790	+				+0.9
6,471,790	+				-0.7
6,471,790	+				-0.1
6,471,790	+				-1.1
6,471,791	-				+1.7
6,471,791	-				-0.3
6,471,791	-				+0.5
6,471,941	+				-0.0
6,471,941	+				+0.1
6,471,948	+				-0.1
6,471,948	+				+0.3
6,471,948	+				-0.0
6,471,948	+				+1.0
6,471,949	-				+0.9
6,471,949	-				-0.6
6,471,949	-				+0.2
6,471,949	-				-0.0
6,471,954	+				-0.2
6,471,954	+				-0.1
6,471,954	+				+0.7
6,471,954	+				-0.5
6,471,955	-				-0.5
6,471,955	-				+0.4
6,471,955	-				-0.5
6,471,955	-				-0.1
6,471,955	-				-0.3
6,471,955	-				+0.5
6,471,955	-				-1.6
6,472,017	+				+0.6
6,472,140	-				-2.7
6,472,143	+				-0.0
6,472,144	-				+0.5
6,472,299	-				-0.4
6,472,299	-				-0.7
6,472,337	+				+0.4
6,472,338	-				-1.6
6,472,418	-				-2.5
6,472,462	+				+0.7
6,472,502	-				+1.5
6,472,517	+				-1.5
6,472,517	+				-0.1
6,472,518	-				-1.3
6,472,518	-				+0.4
6,472,694	+		Pf6N2E2_5660	0.11	-0.4
6,472,694	+		Pf6N2E2_5660	0.11	-2.5
6,472,708	-		Pf6N2E2_5660	0.13	-0.6
6,472,742	+		Pf6N2E2_5660	0.17	-3.1
6,472,926	+		Pf6N2E2_5660	0.41	-3.1
6,472,926	+		Pf6N2E2_5660	0.41	-0.5
6,472,926	+		Pf6N2E2_5660	0.41	-1.1
6,472,927	-		Pf6N2E2_5660	0.41	-2.1
6,472,930	-		Pf6N2E2_5660	0.42	+0.8
6,473,006	+		Pf6N2E2_5660	0.51	-2.1
6,473,086	-		Pf6N2E2_5660	0.62	-0.6
6,473,106	+		Pf6N2E2_5660	0.64	-1.3
6,473,107	-				-0.4
6,473,209	+		Pf6N2E2_5660	0.78	-0.4
6,473,209	+		Pf6N2E2_5660	0.78	-2.4
6,473,235	+		Pf6N2E2_5660	0.81	-0.4
6,473,235	+		Pf6N2E2_5660	0.81	-2.7
6,473,235	+		Pf6N2E2_5660	0.81	-1.3
6,473,236	-		Pf6N2E2_5660	0.81	-0.1
6,473,331	+				+1.2
6,473,331	+				+0.4
6,473,331	+				-1.0
6,473,332	-				+0.1
6,473,352	+				+0.2
6,473,352	+				-0.5
6,473,352	+				-1.5
6,473,353	-				+1.2
6,473,353	-				+0.9
6,473,353	-				-0.5
6,473,370	+				+0.3
6,473,370	+				-0.2
6,473,370	+				-0.4
6,473,371	-				-1.5
6,473,371	-				-4.0
6,473,371	-				-1.2
6,473,371	-				-1.6
6,473,371	-				-1.7
6,473,371	-				-0.2
6,473,379	+				+0.9
6,473,380	-				-2.8
6,473,625	+		Pf6N2E2_5661	0.22	-0.4
6,473,626	-		Pf6N2E2_5661	0.22	-1.0
6,473,646	-		Pf6N2E2_5661	0.25	-0.6
6,473,680	-		Pf6N2E2_5661	0.30	-2.1
6,473,733	+		Pf6N2E2_5661	0.38	-1.4
6,473,733	+		Pf6N2E2_5661	0.38	-2.7
6,473,733	+		Pf6N2E2_5661	0.38	+0.0
6,473,734	-		Pf6N2E2_5661	0.38	-0.3
6,473,734	-		Pf6N2E2_5661	0.38	-0.4
6,473,793	+		Pf6N2E2_5661	0.47	-1.0
6,473,794	-		Pf6N2E2_5661	0.47	-2.1
6,474,075	+		Pf6N2E2_5661	0.87	+0.9
6,474,075	+		Pf6N2E2_5661	0.87	-1.4
6,474,076	-		Pf6N2E2_5661	0.88	-1.0
6,474,136	+				-0.8
6,474,157	+				-0.4
6,474,157	+				-2.3
6,474,157	+				+0.3
6,474,157	+				-3.0
6,474,158	-				-2.2
6,474,158	-				+0.3
6,474,170	+				+0.5
6,474,182	+				-3.1
6,474,182	+				-1.6
6,474,182	+				-2.0
6,474,182	+				-2.0
6,474,182	+				-1.3
6,474,183	-				-0.1
6,474,183	-				-2.8
6,474,183	-				-1.1
6,474,183	-				-2.2
6,474,183	-				-0.8
6,474,200	+				-1.5
6,474,201	-				-1.0
6,474,329	+		Pf6N2E2_5662	0.24	-1.8
6,474,335	+		Pf6N2E2_5662	0.25	-1.5
6,474,335	+		Pf6N2E2_5662	0.25	-2.2
6,474,335	+		Pf6N2E2_5662	0.25	+0.2
6,474,335	+		Pf6N2E2_5662	0.25	+0.8
6,474,335	+		Pf6N2E2_5662	0.25	-2.3
6,474,335	+		Pf6N2E2_5662	0.25	-0.6
6,474,335	+		Pf6N2E2_5662	0.25	-1.1
6,474,335	+		Pf6N2E2_5662	0.25	-1.5
6,474,335	+		Pf6N2E2_5662	0.25	-0.7
6,474,336	-		Pf6N2E2_5662	0.25	-2.0
6,474,336	-		Pf6N2E2_5662	0.25	+0.4
6,474,336	-		Pf6N2E2_5662	0.25	-1.6
6,474,336	-		Pf6N2E2_5662	0.25	+1.3
6,474,380	+		Pf6N2E2_5662	0.32	-0.8
6,474,381	-		Pf6N2E2_5662	0.32	-1.1