Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5586

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
6,402,691	+		Pf6N2E2_5583	0.48	+3.0
6,402,691	+		Pf6N2E2_5583	0.48	+0.9
6,402,692	-		Pf6N2E2_5583	0.48	+1.7
6,402,804	+		Pf6N2E2_5583	0.72	+1.8
6,402,805	-		Pf6N2E2_5583	0.72	+0.4
6,402,841	+		Pf6N2E2_5583	0.80	+2.4
6,402,843	+		Pf6N2E2_5583	0.80	+0.2
6,402,843	+		Pf6N2E2_5583	0.80	+1.3
6,402,843	+		Pf6N2E2_5583	0.80	+0.6
6,402,844	-		Pf6N2E2_5583	0.80	+1.8
6,402,844	-		Pf6N2E2_5583	0.80	+1.3
6,402,864	+		Pf6N2E2_5583	0.84	+0.4
6,402,864	+		Pf6N2E2_5583	0.84	+0.6
6,402,864	+		Pf6N2E2_5583	0.84	+0.3
6,402,864	+		Pf6N2E2_5583	0.84	-0.8
6,402,865	-		Pf6N2E2_5583	0.85	+1.1
6,402,922	+				+0.2
6,402,922	+				+1.6
6,402,923	-				+1.7
6,402,923	-				+1.7
6,402,923	-				+0.8
6,402,923	-				+0.7
6,402,955	-				+0.8
6,402,955	-				+0.1
6,402,957	+				+0.7
6,402,957	+				+0.9
6,402,957	+				+1.0
6,402,957	+				+2.7
6,402,957	+				-0.2
6,402,957	+				-0.5
6,402,957	+				+1.8
6,402,957	+				+0.1
6,402,958	-				+0.7
6,402,958	-				+0.4
6,402,958	-				+1.7
6,402,965	+				+1.1
6,402,965	+				+1.2
6,402,965	+				+1.8
6,402,965	+				+0.8
6,402,966	-				+0.8
6,402,966	-				-1.0
6,402,966	-				+1.1
6,402,966	-				+1.1
6,402,966	-				-2.0
6,402,967	+				+0.4
6,402,968	-				+1.9
6,402,968	-				+0.9
6,402,968	-				+1.2
6,402,968	-				+1.5
6,402,989	-				+0.8
6,403,007	+				+0.6
6,403,007	+				-0.1
6,403,012	+				+0.1
6,403,019	+				+1.3
6,403,300	-		Pf6N2E2_5584	0.75	-1.2
6,403,300	-		Pf6N2E2_5584	0.75	-1.1
6,403,300	-		Pf6N2E2_5584	0.75	-2.1
6,403,300	-		Pf6N2E2_5584	0.75	-0.0
6,403,346	+				+0.5
6,403,346	+				+0.8
6,403,346	+				+1.3
6,403,346	+				+1.1
6,403,346	+				+1.0
6,403,346	+				-0.1
6,403,346	+				+0.5
6,403,346	+				+0.4
6,403,346	+				+0.5
6,403,346	+				+0.9
6,403,346	+				+1.1
6,403,346	+				-0.3
6,403,346	+				+1.3
6,403,346	+				-0.3
6,403,346	+				+1.2
6,403,346	+				+1.7
6,403,347	-				+0.9
6,403,347	-				-0.8
6,403,347	-				+1.4
6,403,347	-				+1.1
6,403,347	-				+0.2
6,403,347	-				-2.6
6,403,347	-				+0.5
6,403,347	-				+1.0
6,403,347	-				+0.6
6,403,347	-				-0.9
6,403,347	-				+0.2
6,403,347	-				+0.3
6,403,347	-				+0.5
6,403,347	-				+1.4
6,403,347	-				+0.2
6,403,347	-				+2.1
6,403,347	-				+1.2
6,403,350	+				-0.8
6,403,350	+				-0.1
6,403,350	+				-0.6
6,403,350	+				+1.1
6,403,350	+				-0.1
6,403,350	+				+1.0
6,403,350	+				-1.0
6,403,350	+				+0.3
6,403,350	+				+0.6
6,403,350	+				-0.3
6,403,350	+				+1.2
6,403,350	+				-0.3
6,403,350	+				+0.5
6,403,350	+				+1.4
6,403,350	+				+1.3
6,403,350	+				+1.8
6,403,350	+				+0.2
6,403,350	+				-0.1
6,403,350	+				+0.7
6,403,350	+				+1.6
6,403,350	+				+1.5
6,403,350	+				-0.6
6,403,350	+				+1.0
6,403,350	+				+1.3
6,403,350	+				-1.4
6,403,350	+				+0.2
6,403,350	+				+0.6
6,403,350	+				+0.8
6,403,350	+				+0.6
6,403,350	+				+0.9
6,403,350	+				+1.0
6,403,351	-				+1.0
6,403,351	-				+1.3
6,403,351	-				+1.0
6,403,351	-				-0.1
6,403,351	-				+1.4
6,403,351	-				+1.5
6,403,351	-				+0.7
6,403,351	-				+1.2
6,403,351	-				+1.4
6,403,351	-				+1.0
6,403,351	-				+0.4
6,403,351	-				+0.3
6,403,351	-				+1.0
6,403,351	-				+0.3
6,403,351	-				-1.3
6,403,351	-				-0.3
6,403,351	-				+0.5
6,403,351	-				+1.1
6,403,351	-				+0.2
6,403,351	-				+1.5
6,403,351	-				-0.7
6,403,354	+				+1.3
6,403,354	+				-0.7
6,403,354	+				+0.8
6,403,354	+				+0.9
6,403,354	+				+2.8
6,403,354	+				+0.2
6,403,354	+				-1.4
6,403,354	+				+0.8
6,403,354	+				+0.6
6,403,354	+				-0.7
6,403,354	+				-1.5
6,403,354	+				+0.8
6,403,354	+				+1.6
6,403,354	+				+1.3
6,403,354	+				-0.6
6,403,354	+				+1.1
6,403,354	+				+1.5
6,403,354	+				+1.0
6,403,355	-				+1.0
6,403,355	-				+0.2
6,403,355	-				+0.8
6,403,355	-				-2.3
6,403,355	-				+0.1
6,403,355	-				-0.5
6,403,355	-				+0.8
6,403,355	-				+0.3
6,403,355	-				+0.9
6,403,355	-				+0.3
6,403,355	-				+0.3
6,403,355	-				-0.1
6,403,355	-				-0.8
6,403,355	-				+0.5
6,403,355	-				-1.0
6,403,355	-				+1.8
6,403,355	-				-0.5
6,403,355	-				+0.9
6,403,399	-				-0.5
6,403,563	+				-0.2
6,403,563	+				-0.4
6,403,563	+				+0.1
6,403,563	+				-0.6
6,403,563	+				-1.0
6,403,563	+				-2.1
6,403,564	-				-0.3
6,403,564	-				+1.2
6,403,564	-				+0.6
6,403,564	-				-0.6
6,403,564	-				+0.6
6,403,648	+				+0.6
6,403,649	-				-1.3
6,403,651	+				+0.4
6,403,651	+				-1.3
6,403,651	+				-0.3
6,403,651	+				-0.5
6,403,651	+				-0.0
6,403,651	+				-0.4
6,403,651	+				-0.3
6,403,652	-				-0.2
6,403,652	-				-0.8
6,403,652	-				-0.7
6,403,663	+				-1.5
6,403,676	+				+0.6
6,403,677	-				-2.3
6,403,682	+				-0.9
6,403,777	+		Pf6N2E2_5586	0.18	+1.1
6,403,795	+		Pf6N2E2_5586	0.21	-1.4
6,403,795	+		Pf6N2E2_5586	0.21	+0.9
6,403,969	+		Pf6N2E2_5586	0.50	-0.9
6,403,969	+		Pf6N2E2_5586	0.50	-0.5
6,403,969	+		Pf6N2E2_5586	0.50	-1.8
6,403,969	+		Pf6N2E2_5586	0.50	-1.0
6,403,969	+		Pf6N2E2_5586	0.50	-0.9
6,403,969	+		Pf6N2E2_5586	0.50	-1.4
6,403,969	+		Pf6N2E2_5586	0.50	-1.9
6,403,970	-		Pf6N2E2_5586	0.50	-1.6
6,403,970	-		Pf6N2E2_5586	0.50	-0.7
6,403,970	-		Pf6N2E2_5586	0.50	-1.1
6,403,970	-		Pf6N2E2_5586	0.50	-0.8
6,403,970	-		Pf6N2E2_5586	0.50	+0.3
6,404,011	+		Pf6N2E2_5586	0.57	-0.4
6,404,011	+		Pf6N2E2_5586	0.57	-0.3
6,404,011	+		Pf6N2E2_5586	0.57	-1.1
6,404,011	+		Pf6N2E2_5586	0.57	-0.7
6,404,011	+		Pf6N2E2_5586	0.57	-1.8
6,404,115	+		Pf6N2E2_5586	0.74	-0.4
6,404,115	+		Pf6N2E2_5586	0.74	+0.4
6,404,116	-		Pf6N2E2_5586	0.74	-1.4
6,404,242	+				-0.5
6,404,242	+				+0.1
6,404,269	+				-1.1
6,404,269	+				-0.5
6,404,269	+				-1.5
6,404,269	+				+0.1
6,404,269	+				-0.7
6,404,269	+				-2.0
6,404,284	+				-2.3
6,404,284	+				-1.5
6,404,317	+				+0.5
6,404,328	+				+1.1
6,404,329	-				+0.2