Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5389

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
6,194,459	-				-0.9
6,194,467	+				-1.4
6,194,467	+				-0.9
6,194,503	+				-2.1
6,194,504	-				-1.3
6,194,504	-				-2.3
6,194,530	+				-0.2
6,194,531	-				-2.6
6,194,536	-				-1.3
6,194,659	+				-3.3
6,194,659	+				-0.7
6,194,660	-				+1.5
6,194,731	+				-1.2
6,194,841	+				-2.2
6,194,842	-				-0.6
6,194,978	+				-1.0
6,195,015	+				-0.4
6,195,078	+				-2.0
6,195,155	+				-1.4
6,195,294	+				-1.6
6,195,294	+				+0.7
6,195,294	+				-1.2
6,195,294	+				-1.3
6,195,295	-				-0.3
6,195,306	+				-1.5
6,195,306	+				-2.6
6,195,343	+				-1.0
6,195,343	+				-0.9
6,195,344	-				+0.7
6,195,357	-				-3.9
6,195,430	+				-1.1
6,195,430	+				-1.9
6,195,430	+				-0.1
6,195,431	-				-3.6
6,195,431	-				-1.4
6,195,431	-				-1.9
6,195,431	-				+0.6
6,195,515	+		Pf6N2E2_5389	0.21	-0.8
6,195,515	+		Pf6N2E2_5389	0.21	-2.0
6,195,515	+		Pf6N2E2_5389	0.21	-1.4
6,195,533	+		Pf6N2E2_5389	0.23	-0.0
6,195,611	+		Pf6N2E2_5389	0.33	-0.5
6,195,611	+		Pf6N2E2_5389	0.33	-1.3
6,195,611	+		Pf6N2E2_5389	0.33	-1.2
6,195,611	+		Pf6N2E2_5389	0.33	-0.2
6,195,611	+		Pf6N2E2_5389	0.33	-1.4
6,195,612	-		Pf6N2E2_5389	0.33	-0.5
6,195,612	-		Pf6N2E2_5389	0.33	+0.0
6,195,612	-		Pf6N2E2_5389	0.33	-1.7
6,195,612	-		Pf6N2E2_5389	0.33	-1.4
6,195,704	+		Pf6N2E2_5389	0.45	-2.2
6,195,704	+		Pf6N2E2_5389	0.45	+0.4
6,195,704	+		Pf6N2E2_5389	0.45	-0.3
6,195,705	-		Pf6N2E2_5389	0.45	-1.2
6,195,705	-		Pf6N2E2_5389	0.45	-1.0
6,195,705	-		Pf6N2E2_5389	0.45	-2.3
6,195,705	-		Pf6N2E2_5389	0.45	-0.9
6,195,755	+		Pf6N2E2_5389	0.51	-0.2
6,195,792	-		Pf6N2E2_5389	0.56	-1.4
6,195,871	-		Pf6N2E2_5389	0.66	-1.4
6,195,872	+		Pf6N2E2_5389	0.66	-0.2
6,195,872	+		Pf6N2E2_5389	0.66	-0.5
6,195,872	+		Pf6N2E2_5389	0.66	-0.2
6,195,873	-		Pf6N2E2_5389	0.66	-2.7
6,196,055	+		Pf6N2E2_5389	0.90	-0.8
6,196,055	+		Pf6N2E2_5389	0.90	-0.5
6,196,055	+		Pf6N2E2_5389	0.90	+0.1
6,196,055	+		Pf6N2E2_5389	0.90	-0.5
6,196,055	+		Pf6N2E2_5389	0.90	-0.0
6,196,056	-		Pf6N2E2_5389	0.90	+1.0
6,196,068	+				-0.9
6,196,069	-				+0.2
6,196,097	+				-0.9
6,196,166	-				-0.3
6,196,166	-				-1.9
6,196,192	+				+0.0
6,196,192	+				-2.2
6,196,193	-				-0.8
6,196,193	-				-1.2
6,196,193	-				+0.8
6,196,203	+				-2.1
6,196,203	+				-0.4
6,196,203	+				-0.6
6,196,203	+				-0.6
6,196,204	-				-0.3
6,196,204	-				-0.3
6,196,204	-				-0.9
6,196,389	+				+0.8
6,196,389	+				+0.1
6,196,390	-				-0.5
6,196,390	-				-2.6
6,196,407	+				-0.3
6,196,408	-				-1.5
6,196,659	-		Pf6N2E2_5390	0.19	-0.2
6,196,736	+		Pf6N2E2_5390	0.26	-0.6
6,196,736	+		Pf6N2E2_5390	0.26	-0.1
6,196,736	+		Pf6N2E2_5390	0.26	+0.9
6,196,737	-		Pf6N2E2_5390	0.26	-1.9
6,196,737	-		Pf6N2E2_5390	0.26	-1.8
6,196,781	+		Pf6N2E2_5390	0.30	-1.3
6,196,781	+		Pf6N2E2_5390	0.30	+0.3
6,196,782	-		Pf6N2E2_5390	0.30	-1.3
6,196,782	-		Pf6N2E2_5390	0.30	-0.2
6,196,847	+		Pf6N2E2_5390	0.36	+1.0
6,196,847	+		Pf6N2E2_5390	0.36	+1.3
6,196,847	+		Pf6N2E2_5390	0.36	-0.1
6,196,847	+		Pf6N2E2_5390	0.36	+1.6
6,196,847	+		Pf6N2E2_5390	0.36	-0.6
6,196,847	+		Pf6N2E2_5390	0.36	+0.6
6,196,847	+		Pf6N2E2_5390	0.36	-1.4
6,196,847	+		Pf6N2E2_5390	0.36	+0.2
6,196,847	+		Pf6N2E2_5390	0.36	-0.2
6,196,848	-		Pf6N2E2_5390	0.36	-0.5
6,196,848	-		Pf6N2E2_5390	0.36	-0.8
6,196,848	-		Pf6N2E2_5390	0.36	-0.0
6,196,848	-		Pf6N2E2_5390	0.36	-1.5
6,196,850	+		Pf6N2E2_5390	0.36	+0.2
6,196,851	-		Pf6N2E2_5390	0.36	-1.6
6,196,851	-		Pf6N2E2_5390	0.36	+0.4
6,196,851	-		Pf6N2E2_5390	0.36	-1.0
6,196,851	-		Pf6N2E2_5390	0.36	+1.5
6,197,064	-		Pf6N2E2_5390	0.55	-0.4