Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5378

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
6,178,682	-		Pf6N2E2_5377	0.48	-0.4
6,178,730	+		Pf6N2E2_5377	0.52	-0.7
6,178,731	-		Pf6N2E2_5377	0.52	-1.0
6,178,731	-		Pf6N2E2_5377	0.52	-2.1
6,178,783	+		Pf6N2E2_5377	0.55	-0.1
6,178,783	+		Pf6N2E2_5377	0.55	-2.0
6,178,783	+		Pf6N2E2_5377	0.55	-1.1
6,178,783	+		Pf6N2E2_5377	0.55	-0.2
6,178,783	+		Pf6N2E2_5377	0.55	-1.1
6,178,783	+		Pf6N2E2_5377	0.55	-1.8
6,178,784	-		Pf6N2E2_5377	0.56	-1.4
6,178,784	-		Pf6N2E2_5377	0.56	-0.3
6,178,784	-		Pf6N2E2_5377	0.56	-1.6
6,178,784	-		Pf6N2E2_5377	0.56	-1.2
6,178,784	-		Pf6N2E2_5377	0.56	-0.6
6,178,784	-		Pf6N2E2_5377	0.56	+0.2
6,178,784	-		Pf6N2E2_5377	0.56	-0.4
6,178,784	-		Pf6N2E2_5377	0.56	-1.5
6,178,861	+		Pf6N2E2_5377	0.61	-0.5
6,178,972	+		Pf6N2E2_5377	0.68	+1.4
6,178,972	+		Pf6N2E2_5377	0.68	-1.7
6,178,972	+		Pf6N2E2_5377	0.68	-3.0
6,178,972	+		Pf6N2E2_5377	0.68	-0.4
6,178,973	-		Pf6N2E2_5377	0.69	-0.3
6,179,219	+		Pf6N2E2_5377	0.85	+0.0
6,179,219	+		Pf6N2E2_5377	0.85	-2.0
6,179,219	+		Pf6N2E2_5377	0.85	-0.4
6,179,219	+		Pf6N2E2_5377	0.85	-2.6
6,179,220	-		Pf6N2E2_5377	0.86	-1.9
6,179,360	+				-0.2
6,179,403	-				-0.3
6,179,436	+				-0.4
6,179,436	+				-1.9
6,179,437	-				-2.5
6,179,460	+				+0.1
6,179,461	-				+0.6
6,179,467	-				-0.2
6,179,467	-				-0.1
6,179,467	-				+0.1
6,179,467	-				+2.4
6,179,467	-				+0.7
6,179,541	-				-1.6
6,179,541	-				+1.4
6,179,561	+				-3.3
6,179,561	+				-2.9
6,179,561	+				-0.6
6,179,582	-				-1.6
6,179,582	-				+1.1
6,179,582	-				+0.0
6,179,582	-				+0.3
6,179,644	+				-1.1
6,179,644	+				-0.3
6,179,644	+				-1.3
6,179,644	+				-1.7
6,179,644	+				+0.6
6,179,926	+		Pf6N2E2_5378	0.52	-0.8
6,179,926	+		Pf6N2E2_5378	0.52	+0.2
6,179,926	+		Pf6N2E2_5378	0.52	-0.7
6,179,926	+		Pf6N2E2_5378	0.52	-0.5
6,179,926	+		Pf6N2E2_5378	0.52	-1.6
6,179,926	+				+1.4
6,179,926	+		Pf6N2E2_5378	0.52	-0.5
6,179,926	+		Pf6N2E2_5378	0.52	-1.3
6,179,926	+		Pf6N2E2_5378	0.52	-0.5
6,179,926	+		Pf6N2E2_5378	0.52	+0.6
6,179,926	+		Pf6N2E2_5378	0.52	-1.2
6,179,926	+		Pf6N2E2_5378	0.52	-1.7
6,179,926	+		Pf6N2E2_5378	0.52	-3.6
6,179,926	+		Pf6N2E2_5378	0.52	-1.2
6,179,927	-		Pf6N2E2_5378	0.52	+1.1
6,179,927	-		Pf6N2E2_5378	0.52	-1.6
6,179,927	-		Pf6N2E2_5378	0.52	-0.5
6,179,927	-		Pf6N2E2_5378	0.52	-0.2
6,179,927	-		Pf6N2E2_5378	0.52	-1.1
6,179,929	+		Pf6N2E2_5378	0.52	-0.4
6,179,929	+		Pf6N2E2_5378	0.52	-1.5
6,179,930	-		Pf6N2E2_5378	0.53	-0.5
6,179,930	-		Pf6N2E2_5378	0.53	-0.5
6,179,930	-		Pf6N2E2_5378	0.53	-3.6
6,179,983	+		Pf6N2E2_5378	0.61	-0.4
6,179,983	+		Pf6N2E2_5378	0.61	-0.7
6,180,088	+		Pf6N2E2_5378	0.76	-1.5
6,180,088	+		Pf6N2E2_5378	0.76	-0.7
6,180,088	+		Pf6N2E2_5378	0.76	-0.7
6,180,088	+		Pf6N2E2_5378	0.76	-2.0
6,180,088	+		Pf6N2E2_5378	0.76	-1.4
6,180,089	-		Pf6N2E2_5378	0.76	+0.4
6,180,089	-		Pf6N2E2_5378	0.76	+0.7
6,180,089	-		Pf6N2E2_5378	0.76	-0.8
6,180,089	-		Pf6N2E2_5378	0.76	-1.8
6,180,092	+		Pf6N2E2_5378	0.77	-0.8
6,180,092	+		Pf6N2E2_5378	0.77	-1.5
6,180,092	+		Pf6N2E2_5378	0.77	-1.0
6,180,092	+		Pf6N2E2_5378	0.77	-1.7
6,180,092	+		Pf6N2E2_5378	0.77	-2.4
6,180,092	+		Pf6N2E2_5378	0.77	-0.5
6,180,092	+		Pf6N2E2_5378	0.77	+0.6
6,180,092	+		Pf6N2E2_5378	0.77	-0.6
6,180,093	-		Pf6N2E2_5378	0.77	+0.4
6,180,093	-		Pf6N2E2_5378	0.77	-0.2
6,180,093	-		Pf6N2E2_5378	0.77	+0.2
6,180,093	-		Pf6N2E2_5378	0.77	-2.5
6,180,093	-		Pf6N2E2_5378	0.77	-1.5
6,180,093	-		Pf6N2E2_5378	0.77	-2.1
6,180,093	-		Pf6N2E2_5378	0.77	-1.7
6,180,093	-		Pf6N2E2_5378	0.77	-0.3
6,180,096	+		Pf6N2E2_5378	0.77	-1.3
6,180,096	+		Pf6N2E2_5378	0.77	-1.4
6,180,096	+		Pf6N2E2_5378	0.77	-2.1
6,180,097	-		Pf6N2E2_5378	0.78	-0.1
6,180,097	-		Pf6N2E2_5378	0.78	-0.1
6,180,097	-		Pf6N2E2_5378	0.78	-1.2
6,180,097	-		Pf6N2E2_5378	0.78	-0.4
6,180,130	+		Pf6N2E2_5378	0.83	-0.3
6,180,230	+				-2.5
6,180,230	+				-1.5
6,180,231	-				-3.2
6,180,231	-				+0.2
6,180,231	-				+0.1
6,180,231	-				-1.1
6,180,390	+		Pf6N2E2_5379	0.11	-1.0
6,180,391	-		Pf6N2E2_5379	0.11	-1.4
6,180,391	-		Pf6N2E2_5379	0.11	-3.2
6,180,498	+		Pf6N2E2_5379	0.20	-0.1
6,180,498	+		Pf6N2E2_5379	0.20	-2.2
6,180,498	+		Pf6N2E2_5379	0.20	-0.0
6,180,498	+		Pf6N2E2_5379	0.20	-0.9
6,180,498	+		Pf6N2E2_5379	0.20	-0.9
6,180,498	+		Pf6N2E2_5379	0.20	-1.2
6,180,499	-		Pf6N2E2_5379	0.20	-0.6
6,180,567	+		Pf6N2E2_5379	0.26	-1.1
6,180,567	+		Pf6N2E2_5379	0.26	-2.3
6,180,568	-		Pf6N2E2_5379	0.26	-1.4
6,180,973	-		Pf6N2E2_5379	0.61	-0.5
6,180,973	-		Pf6N2E2_5379	0.61	-1.0
6,181,110	+		Pf6N2E2_5379	0.72	-1.7
6,181,110	+		Pf6N2E2_5379	0.72	+0.1
6,181,110	+		Pf6N2E2_5379	0.72	-0.5
6,181,111	-		Pf6N2E2_5379	0.72	+0.6
6,181,167	+		Pf6N2E2_5379	0.77	-0.1
6,181,168	-		Pf6N2E2_5379	0.77	+0.3
6,181,168	-		Pf6N2E2_5379	0.77	-2.5
6,181,224	+		Pf6N2E2_5379	0.82	+0.4
6,181,225	-		Pf6N2E2_5379	0.82	+0.1