Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5105 and Pf6N2E2_5106 are separated by 170 nucleotides Pf6N2E2_5106 and Pf6N2E2_5107 are separated by 254 nucleotides Pf6N2E2_5107 and Pf6N2E2_5108 are separated by 267 nucleotides
Pf6N2E2_5105 - hypothetical protein, at 5,886,660 to 5,888,699
_5105
Pf6N2E2_5106 - SSU ribosomal protein S20p, at 5,888,870 to 5,889,148
_5106
Pf6N2E2_5107 - Proposed peptidoglycan lipid II flippase MurJ, at 5,889,403 to 5,890,941
_5107
Pf6N2E2_5108 - Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2), at 5,891,209 to 5,892,009
_5108
Position (kb)
5889
5890
5891 Strain fitness (log2 ratio)
-2
-1
0
1 at 5888.421 kb on + strand, within Pf6N2E2_5105 at 5888.421 kb on + strand, within Pf6N2E2_5105 at 5888.422 kb on - strand, within Pf6N2E2_5105 at 5888.422 kb on - strand, within Pf6N2E2_5105 at 5888.422 kb on - strand, within Pf6N2E2_5105 at 5888.425 kb on - strand, within Pf6N2E2_5105 at 5888.425 kb on - strand, within Pf6N2E2_5105 at 5888.445 kb on + strand, within Pf6N2E2_5105 at 5888.445 kb on + strand, within Pf6N2E2_5105 at 5888.446 kb on - strand, within Pf6N2E2_5105 at 5888.496 kb on + strand at 5888.496 kb on + strand at 5888.496 kb on + strand at 5888.497 kb on - strand at 5888.497 kb on - strand at 5888.497 kb on - strand at 5888.505 kb on + strand at 5888.505 kb on + strand at 5888.511 kb on + strand at 5888.538 kb on + strand at 5888.538 kb on + strand at 5888.538 kb on + strand at 5888.538 kb on + strand at 5888.538 kb on + strand at 5888.539 kb on - strand at 5888.539 kb on - strand at 5888.539 kb on - strand at 5888.541 kb on + strand at 5888.541 kb on + strand at 5888.541 kb on + strand at 5888.541 kb on + strand at 5888.542 kb on - strand at 5888.542 kb on - strand at 5888.542 kb on - strand at 5888.542 kb on - strand at 5888.544 kb on + strand at 5888.544 kb on + strand at 5888.544 kb on + strand at 5888.545 kb on - strand at 5888.596 kb on + strand at 5888.596 kb on + strand at 5888.596 kb on + strand at 5888.596 kb on + strand at 5888.607 kb on + strand at 5888.607 kb on + strand at 5888.607 kb on + strand at 5888.607 kb on + strand at 5888.608 kb on - strand at 5888.608 kb on - strand at 5888.608 kb on - strand at 5888.616 kb on + strand at 5888.616 kb on + strand at 5888.616 kb on + strand at 5888.698 kb on - strand at 5888.698 kb on - strand at 5888.734 kb on + strand at 5888.734 kb on + strand at 5888.734 kb on + strand at 5888.734 kb on + strand at 5888.735 kb on - strand at 5888.795 kb on + strand at 5888.795 kb on + strand at 5888.795 kb on + strand at 5888.796 kb on - strand at 5888.796 kb on - strand at 5889.344 kb on + strand at 5889.393 kb on + strand at 5889.393 kb on + strand at 5891.037 kb on + strand at 5891.037 kb on + strand at 5891.052 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 5,888,421 + Pf6N2E2_5105 0.86 +0.5 5,888,421 + Pf6N2E2_5105 0.86 -0.9 5,888,422 - Pf6N2E2_5105 0.86 -0.6 5,888,422 - Pf6N2E2_5105 0.86 +0.1 5,888,422 - Pf6N2E2_5105 0.86 -0.5 5,888,425 - Pf6N2E2_5105 0.87 -1.6 5,888,425 - Pf6N2E2_5105 0.87 -2.0 5,888,445 + Pf6N2E2_5105 0.88 -2.1 5,888,445 + Pf6N2E2_5105 0.88 -0.8 5,888,446 - Pf6N2E2_5105 0.88 +1.2 5,888,496 + -0.4 5,888,496 + +0.1 5,888,496 + -1.7 5,888,497 - +1.4 5,888,497 - +0.8 5,888,497 - -0.6 5,888,505 + +0.0 5,888,505 + +0.7 5,888,511 + -0.1 5,888,538 + +1.1 5,888,538 + +1.0 5,888,538 + -0.2 5,888,538 + +0.7 5,888,538 + -1.4 5,888,539 - +0.4 5,888,539 - -1.7 5,888,539 - +0.3 5,888,541 + +0.3 5,888,541 + +0.5 5,888,541 + +0.8 5,888,541 + +0.4 5,888,542 - -0.3 5,888,542 - +0.6 5,888,542 - +0.7 5,888,542 - -0.0 5,888,544 + -1.9 5,888,544 + +0.6 5,888,544 + +1.0 5,888,545 - +0.0 5,888,596 + +0.4 5,888,596 + +1.3 5,888,596 + -0.7 5,888,596 + -0.8 5,888,607 + +0.3 5,888,607 + +0.5 5,888,607 + -0.5 5,888,607 + -0.6 5,888,608 - -0.3 5,888,608 - +1.2 5,888,608 - -0.5 5,888,616 + -1.1 5,888,616 + +0.6 5,888,616 + +0.7 5,888,698 - +0.1 5,888,698 - -0.1 5,888,734 + -0.3 5,888,734 + -0.2 5,888,734 + +0.6 5,888,734 + +1.5 5,888,735 - +0.5 5,888,795 + +0.6 5,888,795 + +1.1 5,888,795 + +0.4 5,888,796 - -0.6 5,888,796 - +0.5 5,889,344 + +0.4 5,889,393 + -1.8 5,889,393 + -0.8 5,891,037 + -1.5 5,891,037 + +0.6 5,891,052 + -0.2
Or see this region's nucleotide sequence