Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4464 and Pf6N2E2_4465 are separated by 291 nucleotides Pf6N2E2_4465 and Pf6N2E2_4466 overlap by 25 nucleotides
Pf6N2E2_4464 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 5,197,586 to 5,198,554
_4464
Pf6N2E2_4465 - ChaC-related protein, at 5,198,846 to 5,199,514
_4465
Pf6N2E2_4466 - Glycerol-3-phosphate transporter, at 5,199,490 to 5,200,839
_4466
Position (kb) 5198
5199
5200 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 5197.848 kb on + strand, within Pf6N2E2_4464 at 5197.964 kb on + strand, within Pf6N2E2_4464 at 5198.292 kb on - strand, within Pf6N2E2_4464 at 5198.425 kb on - strand, within Pf6N2E2_4464 at 5198.441 kb on + strand, within Pf6N2E2_4464 at 5198.442 kb on - strand, within Pf6N2E2_4464 at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.469 kb on - strand at 5198.548 kb on + strand at 5198.552 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.671 kb on + strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.672 kb on - strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.673 kb on + strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.674 kb on - strand at 5198.685 kb on + strand at 5198.685 kb on + strand at 5198.686 kb on - strand at 5198.686 kb on - strand at 5198.686 kb on - strand at 5198.689 kb on + strand at 5198.696 kb on + strand at 5198.700 kb on + strand at 5198.723 kb on - strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.727 kb on + strand at 5198.728 kb on - strand at 5198.728 kb on - strand at 5198.728 kb on - strand at 5198.729 kb on + strand at 5198.729 kb on + strand at 5198.730 kb on - strand at 5198.759 kb on + strand at 5198.759 kb on + strand at 5198.760 kb on - strand at 5198.869 kb on + strand at 5198.869 kb on + strand at 5198.869 kb on + strand at 5198.870 kb on - strand at 5198.882 kb on + strand at 5198.882 kb on + strand at 5198.990 kb on + strand, within Pf6N2E2_4465 at 5198.990 kb on + strand, within Pf6N2E2_4465 at 5198.991 kb on - strand, within Pf6N2E2_4465 at 5199.056 kb on + strand, within Pf6N2E2_4465 at 5199.056 kb on + strand, within Pf6N2E2_4465 at 5199.072 kb on - strand, within Pf6N2E2_4465 at 5199.072 kb on - strand, within Pf6N2E2_4465 at 5199.297 kb on + strand, within Pf6N2E2_4465 at 5199.297 kb on + strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.321 kb on - strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.398 kb on + strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.399 kb on - strand at 5199.399 kb on - strand, within Pf6N2E2_4465 at 5199.476 kb on - strand at 5199.624 kb on - strand at 5199.624 kb on - strand at 5199.624 kb on - strand at 5199.624 kb on - strand at 5199.624 kb on - strand at 5199.755 kb on + strand, within Pf6N2E2_4466 at 5199.755 kb on + strand, within Pf6N2E2_4466 at 5199.824 kb on + strand, within Pf6N2E2_4466 at 5199.825 kb on - strand, within Pf6N2E2_4466 at 5199.825 kb on - strand, within Pf6N2E2_4466 at 5199.825 kb on - strand, within Pf6N2E2_4466 at 5199.947 kb on + strand, within Pf6N2E2_4466 at 5199.948 kb on - strand, within Pf6N2E2_4466 at 5199.957 kb on - strand, within Pf6N2E2_4466 at 5199.957 kb on - strand, within Pf6N2E2_4466 at 5200.005 kb on - strand, within Pf6N2E2_4466 at 5200.071 kb on - strand, within Pf6N2E2_4466 at 5200.097 kb on + strand, within Pf6N2E2_4466 at 5200.098 kb on - strand, within Pf6N2E2_4466 at 5200.098 kb on - strand, within Pf6N2E2_4466 at 5200.098 kb on - strand, within Pf6N2E2_4466 at 5200.172 kb on + strand, within Pf6N2E2_4466 at 5200.173 kb on - strand, within Pf6N2E2_4466 at 5200.253 kb on - strand, within Pf6N2E2_4466 at 5200.268 kb on + strand, within Pf6N2E2_4466 at 5200.268 kb on + strand, within Pf6N2E2_4466 at 5200.268 kb on + strand, within Pf6N2E2_4466 at 5200.268 kb on + strand, within Pf6N2E2_4466 at 5200.268 kb on + strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.269 kb on - strand, within Pf6N2E2_4466 at 5200.309 kb on + strand, within Pf6N2E2_4466
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 5,197,848 + Pf6N2E2_4464 0.27 +0.6 5,197,964 + Pf6N2E2_4464 0.39 +0.7 5,198,292 - Pf6N2E2_4464 0.73 -1.8 5,198,425 - Pf6N2E2_4464 0.87 +2.4 5,198,441 + Pf6N2E2_4464 0.88 +0.9 5,198,442 - Pf6N2E2_4464 0.88 -0.1 5,198,468 + +0.2 5,198,468 + +1.5 5,198,468 + +1.4 5,198,469 - +2.0 5,198,548 + +2.2 5,198,552 + +2.2 5,198,671 + +1.8 5,198,671 + +3.4 5,198,671 + +2.4 5,198,671 + +2.4 5,198,671 + +2.4 5,198,671 + +0.0 5,198,671 + +1.8 5,198,671 + +2.9 5,198,671 + +2.2 5,198,671 + +1.7 5,198,671 + +2.3 5,198,671 + +3.0 5,198,671 + +3.4 5,198,671 + +1.2 5,198,672 - +2.5 5,198,672 - +2.0 5,198,672 - +1.5 5,198,672 - +2.4 5,198,672 - +2.0 5,198,672 - +2.4 5,198,672 - +2.1 5,198,672 - +3.9 5,198,672 - +0.6 5,198,672 - +0.9 5,198,672 - +1.4 5,198,672 - +1.6 5,198,672 - +1.5 5,198,672 - +1.7 5,198,673 + +1.8 5,198,673 + +2.6 5,198,673 + +2.3 5,198,673 + +0.8 5,198,674 - +2.0 5,198,674 - +2.7 5,198,674 - +2.5 5,198,674 - +1.7 5,198,685 + +1.6 5,198,685 + +2.6 5,198,686 - +2.0 5,198,686 - +1.4 5,198,686 - +2.2 5,198,689 + +1.8 5,198,696 + +2.7 5,198,700 + +2.1 5,198,723 - +2.9 5,198,727 + +3.0 5,198,727 + +3.2 5,198,727 + +2.9 5,198,727 + +2.5 5,198,727 + +2.9 5,198,727 + +2.5 5,198,727 + +2.3 5,198,728 - +1.8 5,198,728 - +1.2 5,198,728 - +1.9 5,198,729 + +3.1 5,198,729 + +4.5 5,198,730 - +2.5 5,198,759 + +1.8 5,198,759 + +3.1 5,198,760 - +2.0 5,198,869 + +2.6 5,198,869 + +1.9 5,198,869 + +3.0 5,198,870 - +1.0 5,198,882 + +1.3 5,198,882 + +1.9 5,198,990 + Pf6N2E2_4465 0.22 +3.1 5,198,990 + Pf6N2E2_4465 0.22 +3.6 5,198,991 - Pf6N2E2_4465 0.22 +2.7 5,199,056 + Pf6N2E2_4465 0.31 +3.6 5,199,056 + Pf6N2E2_4465 0.31 +4.7 5,199,072 - Pf6N2E2_4465 0.34 +2.8 5,199,072 - Pf6N2E2_4465 0.34 +2.0 5,199,297 + Pf6N2E2_4465 0.67 +3.4 5,199,297 + Pf6N2E2_4465 0.67 +3.7 5,199,321 - Pf6N2E2_4465 0.71 +2.6 5,199,321 - Pf6N2E2_4465 0.71 +1.8 5,199,321 - Pf6N2E2_4465 0.71 +3.2 5,199,398 + Pf6N2E2_4465 0.83 +3.8 5,199,398 + Pf6N2E2_4465 0.83 +4.6 5,199,398 + Pf6N2E2_4465 0.83 +2.9 5,199,399 - Pf6N2E2_4465 0.83 +3.3 5,199,399 - Pf6N2E2_4465 0.83 +3.3 5,199,399 - Pf6N2E2_4465 0.83 +2.9 5,199,399 - +4.0 5,199,399 - Pf6N2E2_4465 0.83 +3.3 5,199,476 - +5.5 5,199,624 - +5.7 5,199,624 - +6.0 5,199,624 - +5.9 5,199,624 - -1.2 5,199,624 - +6.4 5,199,755 + Pf6N2E2_4466 0.20 +6.2 5,199,755 + Pf6N2E2_4466 0.20 +6.0 5,199,824 + Pf6N2E2_4466 0.25 +5.8 5,199,825 - Pf6N2E2_4466 0.25 +6.0 5,199,825 - Pf6N2E2_4466 0.25 +6.3 5,199,825 - Pf6N2E2_4466 0.25 +5.9 5,199,947 + Pf6N2E2_4466 0.34 +6.3 5,199,948 - Pf6N2E2_4466 0.34 +6.1 5,199,957 - Pf6N2E2_4466 0.35 +6.6 5,199,957 - Pf6N2E2_4466 0.35 +6.0 5,200,005 - Pf6N2E2_4466 0.38 +6.8 5,200,071 - Pf6N2E2_4466 0.43 +6.0 5,200,097 + Pf6N2E2_4466 0.45 +5.4 5,200,098 - Pf6N2E2_4466 0.45 +5.8 5,200,098 - Pf6N2E2_4466 0.45 +6.2 5,200,098 - Pf6N2E2_4466 0.45 +6.5 5,200,172 + Pf6N2E2_4466 0.51 +7.1 5,200,173 - Pf6N2E2_4466 0.51 +5.9 5,200,253 - Pf6N2E2_4466 0.57 +5.5 5,200,268 + Pf6N2E2_4466 0.58 +5.9 5,200,268 + Pf6N2E2_4466 0.58 +5.4 5,200,268 + Pf6N2E2_4466 0.58 +6.1 5,200,268 + Pf6N2E2_4466 0.58 +6.8 5,200,268 + Pf6N2E2_4466 0.58 +5.9 5,200,269 - Pf6N2E2_4466 0.58 +6.8 5,200,269 - Pf6N2E2_4466 0.58 +7.0 5,200,269 - Pf6N2E2_4466 0.58 +5.9 5,200,269 - Pf6N2E2_4466 0.58 +6.7 5,200,269 - Pf6N2E2_4466 0.58 +5.5 5,200,269 - Pf6N2E2_4466 0.58 +6.1 5,200,309 + Pf6N2E2_4466 0.61 +5.8
Or see this region's nucleotide sequence