Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4085

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
4,760,256	+		Pf6N2E2_4084	0.27	-1.5
4,760,257	-				+0.9
4,760,257	-		Pf6N2E2_4084	0.27	-1.8
4,760,332	-		Pf6N2E2_4084	0.35	-2.8
4,760,481	+		Pf6N2E2_4084	0.51	-3.5
4,760,481	+		Pf6N2E2_4084	0.51	-2.5
4,760,482	-		Pf6N2E2_4084	0.51	-1.4
4,760,482	-		Pf6N2E2_4084	0.51	-3.7
4,760,482	-		Pf6N2E2_4084	0.51	-1.3
4,760,645	+		Pf6N2E2_4084	0.69	-2.2
4,760,645	+		Pf6N2E2_4084	0.69	-2.7
4,760,645	+		Pf6N2E2_4084	0.69	-2.9
4,760,645	+		Pf6N2E2_4084	0.69	-2.3
4,760,645	+		Pf6N2E2_4084	0.69	-2.4
4,760,646	-		Pf6N2E2_4084	0.69	-2.5
4,760,646	-		Pf6N2E2_4084	0.69	-2.4
4,760,646	-		Pf6N2E2_4084	0.69	-2.3
4,760,646	-		Pf6N2E2_4084	0.69	-3.8
4,761,039	-				-0.2
4,761,179	-				-0.2
4,761,502	+		Pf6N2E2_4085	0.28	-2.5
4,762,567	+				-0.1
4,762,567	+				-0.2
4,762,626	+				+2.1
4,762,626	+				-0.0
4,762,626	+				+1.9
4,762,626	+				+0.4
4,762,627	-				-2.4
4,762,627	-				-0.6
4,762,663	+				+1.5
4,762,663	+				+1.1
4,762,664	-				+0.5
4,762,664	-				-0.9
4,762,696	+				+1.4
4,762,697	-				-3.4
4,762,820	+				+3.3
4,762,820	+				+2.2
4,762,820	+				+1.1
4,762,820	+				+2.1
4,762,820	+				+0.8
4,762,820	+				+1.9
4,762,821	-				-1.1
4,762,821	-				+0.6
4,762,821	-				-0.0
4,762,821	-				-2.1
4,762,821	-				-1.2
4,762,821	-				-1.2
4,762,821	-				-0.6
4,762,821	-				-0.4
4,762,821	-				-2.2
4,762,821	-				-1.4
4,762,821	-				-3.0
4,762,821	-				-0.4
4,762,821	-				-1.8
4,762,824	+				+2.4
4,762,824	+				+3.7
4,762,824	+				+2.3
4,762,824	+				+2.6
4,762,824	+				+1.4
4,762,824	+				+1.6
4,762,824	+				+1.2
4,762,824	+				+2.1
4,762,824	+				+1.7
4,762,824	+				+2.9
4,762,824	+				+1.7
4,762,824	+				+1.9
4,762,824	+				+1.9
4,762,824	+				+1.5
4,762,824	+				+0.6
4,762,824	+				+2.3
4,762,825	-				-1.0
4,762,825	-				-2.9
4,762,825	-				-2.5
4,762,825	-				-1.7
4,762,825	-				-0.6
4,762,825	-				+0.2
4,762,825	-				-0.8
4,762,825	-				-1.6
4,762,825	-				-1.7
4,762,825	-				-1.1
4,762,825	-				-2.2
4,762,825	-				-1.8
4,762,825	-				-1.2
4,762,825	-				-1.7
4,762,825	-				-0.6
4,762,825	-				-0.7
4,762,825	-				-2.7
4,762,825	-				-1.3
4,762,825	-				-0.9
4,762,825	-				-2.4
4,762,826	+				+2.9
4,762,826	+				+0.5
4,762,826	+				+1.7
4,762,827	-				-0.6
4,762,827	-				-0.7
4,762,827	-				-2.1
4,762,827	-				-0.4
4,762,827	-				-1.5
4,762,872	+				+0.3
4,762,873	-				-0.6
4,762,892	+				+3.3
4,762,892	+				-2.1
4,762,892	+				-0.8
4,762,893	-				-1.4
4,762,893	-				-1.4
4,762,893	-				-0.2
4,762,893	-				-2.8
4,762,893	-				-1.4
4,762,893	-				-2.1
4,762,893	-				-0.8
4,762,893	-				+0.3
4,762,893	-				-2.1
4,762,893	-				-0.0
4,762,893	-				-0.8
4,762,895	+				+2.5
4,762,895	+				+3.5
4,762,895	+				+2.2
4,762,896	-				-2.9
4,762,896	-				+1.1
4,762,896	-				-0.5
4,762,896	-				-0.6
4,762,896	-				-0.3
4,762,896	-				-1.0
4,762,964	-				-1.4
4,762,964	-				+0.6
4,762,964	-				-1.1
4,762,964	-				-1.8
4,762,964	-				-1.6
4,762,971	+				+2.0
4,762,996	+				-0.8
4,763,017	+				-1.5
4,763,017	+				-1.7
4,763,018	-				-1.2
4,763,018	-				-1.8
4,763,018	-				-2.5
4,763,018	-				-0.6
4,763,091	+				-1.3
4,763,091	+				-0.9
4,763,091	+				-1.3
4,763,092	-				-1.4
4,763,092	-				-1.2
4,763,138	+				-2.1
4,763,138	+				-1.7
4,763,139	-				-1.0
4,763,139	-				-1.7
4,763,139	-				-1.7
4,763,139	-				-2.5
4,763,139	-				-0.9
4,763,139	-				-0.9
4,763,139	-				-3.3
4,763,139	-				-1.2
4,763,139	-				+0.1
4,763,358	+		Pf6N2E2_4086	0.23	-1.9
4,763,358	+		Pf6N2E2_4086	0.23	-2.4
4,763,358	+		Pf6N2E2_4086	0.23	+0.1
4,763,359	-		Pf6N2E2_4086	0.23	-1.0
4,763,359	-		Pf6N2E2_4086	0.23	-3.5
4,763,359	-		Pf6N2E2_4086	0.23	-0.6
4,763,359	-		Pf6N2E2_4086	0.23	+0.3
4,763,403	+		Pf6N2E2_4086	0.26	-1.9
4,763,403	+		Pf6N2E2_4086	0.26	-1.9
4,763,403	+		Pf6N2E2_4086	0.26	-0.3
4,763,404	-		Pf6N2E2_4086	0.26	-2.8
4,763,404	-		Pf6N2E2_4086	0.26	-1.3
4,763,406	+		Pf6N2E2_4086	0.26	-1.9
4,763,406	+		Pf6N2E2_4086	0.26	-2.2
4,763,406	+		Pf6N2E2_4086	0.26	-3.4
4,763,406	+		Pf6N2E2_4086	0.26	-2.2
4,763,406	+		Pf6N2E2_4086	0.26	-2.6
4,763,406	+		Pf6N2E2_4086	0.26	-1.9
4,763,407	-		Pf6N2E2_4086	0.27	-2.0
4,763,407	-		Pf6N2E2_4086	0.27	-2.4
4,763,407	-		Pf6N2E2_4086	0.27	-1.9
4,763,407	-		Pf6N2E2_4086	0.27	-0.8
4,763,407	-		Pf6N2E2_4086	0.27	-3.0
4,763,469	-		Pf6N2E2_4086	0.31	-0.6