Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3942

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
4,577,491	+		Pf6N2E2_3940	0.64	+1.6
4,577,491	+		Pf6N2E2_3940	0.64	-0.6
4,577,491	+		Pf6N2E2_3940	0.64	+2.8
4,577,491	+		Pf6N2E2_3940	0.64	+1.2
4,577,492	-		Pf6N2E2_3940	0.64	-0.1
4,577,560	+		Pf6N2E2_3940	0.74	+1.5
4,577,560	+		Pf6N2E2_3940	0.74	+1.8
4,577,590	+		Pf6N2E2_3940	0.79	+1.2
4,577,591	-		Pf6N2E2_3940	0.79	+2.1
4,577,623	+		Pf6N2E2_3940	0.84	-1.0
4,577,623	+		Pf6N2E2_3940	0.84	+2.3
4,577,623	+		Pf6N2E2_3940	0.84	+0.9
4,577,623	+		Pf6N2E2_3940	0.84	+2.7
4,577,623	+		Pf6N2E2_3940	0.84	+1.4
4,577,623	+		Pf6N2E2_3940	0.84	+2.1
4,577,623	+		Pf6N2E2_3940	0.84	+1.8
4,577,623	+		Pf6N2E2_3940	0.84	-0.7
4,577,623	+		Pf6N2E2_3940	0.84	+1.3
4,577,623	+		Pf6N2E2_3940	0.84	+2.6
4,577,623	+		Pf6N2E2_3940	0.84	+1.3
4,577,623	+		Pf6N2E2_3940	0.84	+1.1
4,577,624	-		Pf6N2E2_3940	0.84	+0.4
4,577,624	-		Pf6N2E2_3940	0.84	+3.4
4,577,624	-		Pf6N2E2_3940	0.84	-0.8
4,577,624	-		Pf6N2E2_3940	0.84	-1.0
4,577,659	+		Pf6N2E2_3940	0.89	-0.9
4,577,660	-		Pf6N2E2_3940	0.89	-1.1
4,577,660	-		Pf6N2E2_3940	0.89	-0.8
4,577,715	+				+1.4
4,577,736	+				+2.0
4,577,737	-				-1.5
4,577,796	+				+0.7
4,577,796	+				+0.8
4,577,796	+				+1.4
4,577,796	+				+1.0
4,577,796	+				+2.1
4,577,797	-				-0.0
4,577,797	-				+0.5
4,577,797	-				-0.2
4,577,797	-				-1.5
4,577,797	-				+0.0
4,577,797	-				+0.7
4,577,797	-				-1.3
4,577,797	-				-0.5
4,577,801	+				+0.8
4,577,802	-				-2.1
4,577,918	-				-2.1
4,577,918	-				-2.3
4,578,257	+		Pf6N2E2_3941	0.80	-1.5
4,578,257	+		Pf6N2E2_3941	0.80	-2.6
4,578,257	+		Pf6N2E2_3941	0.80	-2.1
4,578,258	-		Pf6N2E2_3941	0.80	-3.0
4,578,258	-		Pf6N2E2_3941	0.80	-2.7
4,578,258	-		Pf6N2E2_3941	0.80	-3.0
4,578,258	-		Pf6N2E2_3941	0.80	-3.0
4,578,258	-		Pf6N2E2_3941	0.80	-2.4
4,578,303	-		Pf6N2E2_3941	0.90	-1.7
4,578,383	+				-0.5
4,578,383	+				-2.8
4,578,383	+				-1.5
4,578,384	-				-0.8
4,578,410	+				-1.1
4,578,411	-				-3.1
4,578,411	-				-2.5
4,578,411	-				-1.9
4,578,411	-				-2.6
4,578,447	-				-1.9
4,578,451	+				-0.9
4,578,451	+				-1.0
4,578,451	+				-1.3
4,578,452	-				-3.0
4,578,452	-				-1.9
4,578,452	-				-2.6
4,578,452	-				-0.5
4,578,452	-				-0.8
4,578,452	-				-0.3
4,578,452	-				-0.3
4,578,452	-				+0.2
4,578,496	-				-1.4
4,578,666	+		Pf6N2E2_3942	0.13	-3.1
4,578,666	+		Pf6N2E2_3942	0.13	-2.5
4,578,667	-		Pf6N2E2_3942	0.13	-0.5
4,578,693	+		Pf6N2E2_3942	0.14	-0.4
4,579,128	+		Pf6N2E2_3942	0.33	-1.3
4,579,128	+		Pf6N2E2_3942	0.33	-1.8
4,579,128	+		Pf6N2E2_3942	0.33	-1.5
4,579,129	-		Pf6N2E2_3942	0.33	-1.8
4,579,264	-		Pf6N2E2_3942	0.39	-0.2
4,579,264	-		Pf6N2E2_3942	0.39	-0.9
4,579,317	+		Pf6N2E2_3942	0.41	-1.8
4,579,318	-		Pf6N2E2_3942	0.41	-3.1
4,579,318	-		Pf6N2E2_3942	0.41	-2.5
4,579,524	+		Pf6N2E2_3942	0.50	-0.9
4,579,524	+		Pf6N2E2_3942	0.50	-1.1
4,579,525	-		Pf6N2E2_3942	0.50	-2.5
4,579,563	+		Pf6N2E2_3942	0.52	-1.1
4,579,578	+		Pf6N2E2_3942	0.53	-1.7
4,579,578	+		Pf6N2E2_3942	0.53	-1.1
4,579,578	+		Pf6N2E2_3942	0.53	-1.2
4,579,579	-		Pf6N2E2_3942	0.53	-0.9
4,579,845	+		Pf6N2E2_3942	0.64	-0.2
4,579,846	-		Pf6N2E2_3942	0.65	+0.3
4,579,846	-		Pf6N2E2_3942	0.65	-2.4
4,579,926	+		Pf6N2E2_3942	0.68	-1.1
4,579,926	+		Pf6N2E2_3942	0.68	-2.8
4,579,927	-		Pf6N2E2_3942	0.68	-0.5
4,579,927	-		Pf6N2E2_3942	0.68	-3.9
4,580,203	-		Pf6N2E2_3942	0.80	-2.8
4,580,268	+		Pf6N2E2_3942	0.83	-1.3
4,580,313	+		Pf6N2E2_3942	0.85	-2.6
4,580,313	+		Pf6N2E2_3942	0.85	-1.3
4,580,313	+		Pf6N2E2_3942	0.85	-1.3
4,580,313	+		Pf6N2E2_3942	0.85	-3.2
4,580,313	+		Pf6N2E2_3942	0.85	-1.0
4,580,319	+		Pf6N2E2_3942	0.85	-1.3
4,580,319	+		Pf6N2E2_3942	0.85	-2.3
4,580,319	+		Pf6N2E2_3942	0.85	-1.6
4,580,360	-		Pf6N2E2_3942	0.87	-3.4
4,581,032	+		Pf6N2E2_3943	0.30	+0.4
4,581,032	+		Pf6N2E2_3943	0.30	+0.3
4,581,033	-		Pf6N2E2_3943	0.30	-1.3
4,581,136	+		Pf6N2E2_3943	0.43	+0.1
4,581,136	+		Pf6N2E2_3943	0.43	-1.2
4,581,137	-		Pf6N2E2_3943	0.43	+0.9
4,581,137	-		Pf6N2E2_3943	0.43	-0.4
4,581,229	+		Pf6N2E2_3943	0.55	-0.3
4,581,229	+		Pf6N2E2_3943	0.55	+1.7
4,581,229	+		Pf6N2E2_3943	0.55	-0.1
4,581,229	+		Pf6N2E2_3943	0.55	-0.9
4,581,230	-		Pf6N2E2_3943	0.55	+0.7
4,581,262	+		Pf6N2E2_3943	0.59	+0.2
4,581,263	-		Pf6N2E2_3943	0.59	+0.3
4,581,263	-		Pf6N2E2_3943	0.59	+0.3
4,581,263	-		Pf6N2E2_3943	0.59	-1.3
4,581,269	+		Pf6N2E2_3943	0.60	-1.1
4,581,270	-		Pf6N2E2_3943	0.60	-1.7
4,581,478	+		Pf6N2E2_3943	0.86	+0.5
4,581,478	+		Pf6N2E2_3943	0.86	-0.3
4,581,479	-		Pf6N2E2_3943	0.87	-1.3
4,581,540	+				-0.7
4,581,540	+				-0.4
4,581,540	+				+0.4
4,581,540	+				-0.8
4,581,541	-				+0.5
4,581,541	-				-1.4
4,581,574	+				-1.8
4,581,575	-				-0.1
4,581,575	-				+0.7
4,581,591	+				-0.7
4,581,592	-				-2.1
4,581,640	-				-0.5
4,581,647	-				-0.5