Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3908

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
4,541,845	+		Pf6N2E2_3906	0.87	+0.6
4,541,845	+		Pf6N2E2_3906	0.87	+0.7
4,541,846	-		Pf6N2E2_3906	0.87	-1.6
4,541,846	-		Pf6N2E2_3906	0.87	-2.4
4,542,383	+		Pf6N2E2_3907	0.62	+0.6
4,542,383	+		Pf6N2E2_3907	0.62	-1.0
4,542,383	+		Pf6N2E2_3907	0.62	-0.2
4,542,383	+		Pf6N2E2_3907	0.62	+1.6
4,542,383	+		Pf6N2E2_3907	0.62	+0.5
4,542,384	-		Pf6N2E2_3907	0.63	+0.4
4,542,384	-		Pf6N2E2_3907	0.63	-0.7
4,542,384	-		Pf6N2E2_3907	0.63	-0.8
4,542,384	-		Pf6N2E2_3907	0.63	-1.6
4,542,384	-		Pf6N2E2_3907	0.63	+1.3
4,542,384	-		Pf6N2E2_3907	0.63	-0.0
4,542,522	+				+0.8
4,542,522	+				+0.5
4,542,522	+				-0.5
4,542,523	-				+0.3
4,542,523	-				-0.8
4,542,524	+				-0.2
4,542,524	+				+1.2
4,542,525	-				-2.7
4,542,549	-				+0.9
4,542,764	+				+1.6
4,542,765	-				-2.6
4,542,984	-		Pf6N2E2_3908	0.13	-2.6
4,543,095	-		Pf6N2E2_3908	0.20	-1.5
4,543,095	-		Pf6N2E2_3908	0.20	-2.5
4,543,098	+		Pf6N2E2_3908	0.20	-2.3
4,543,098	+		Pf6N2E2_3908	0.20	-1.8
4,543,098	+		Pf6N2E2_3908	0.20	-2.7
4,543,098	+		Pf6N2E2_3908	0.20	-2.0
4,543,099	-		Pf6N2E2_3908	0.20	+0.2
4,543,157	+		Pf6N2E2_3908	0.23	-3.0
4,543,187	+		Pf6N2E2_3908	0.25	-2.0
4,543,187	+		Pf6N2E2_3908	0.25	-2.6
4,543,187	+		Pf6N2E2_3908	0.25	-1.8
4,543,188	-		Pf6N2E2_3908	0.25	-1.6
4,543,188	-		Pf6N2E2_3908	0.25	-2.7
4,543,188	-		Pf6N2E2_3908	0.25	-1.3
4,543,188	-		Pf6N2E2_3908	0.25	-3.0
4,543,344	-		Pf6N2E2_3908	0.35	-3.0
4,543,391	+		Pf6N2E2_3908	0.38	-1.6
4,543,392	-		Pf6N2E2_3908	0.38	-2.4
4,543,392	-		Pf6N2E2_3908	0.38	-1.9
4,543,478	+		Pf6N2E2_3908	0.44	-1.5
4,543,478	+		Pf6N2E2_3908	0.44	-2.8
4,543,557	-		Pf6N2E2_3908	0.48	-1.3
4,543,557	-		Pf6N2E2_3908	0.48	-2.3
4,543,666	+		Pf6N2E2_3908	0.55	-3.0
4,543,694	+		Pf6N2E2_3908	0.57	-3.0
4,543,695	-		Pf6N2E2_3908	0.57	-3.5
4,543,695	-		Pf6N2E2_3908	0.57	-2.4
4,543,697	+		Pf6N2E2_3908	0.57	-2.0
4,543,697	+		Pf6N2E2_3908	0.57	-1.2
4,543,727	+		Pf6N2E2_3908	0.59	-2.2
4,543,776	-		Pf6N2E2_3908	0.62	-2.3
4,543,865	+		Pf6N2E2_3908	0.68	-1.8
4,543,866	-		Pf6N2E2_3908	0.68	-2.5
4,544,349	-				-0.4
4,544,374	+				+0.4
4,544,374	+				+0.4
4,544,374	+				-0.2
4,544,375	-				+0.8
4,544,375	-				-1.4
4,544,375	-				-0.2
4,544,508	-				-0.3
4,544,770	-		Pf6N2E2_3909	0.14	+0.1
4,545,045	+		Pf6N2E2_3909	0.42	-0.1
4,545,046	-		Pf6N2E2_3909	0.42	+1.2
4,545,046	-		Pf6N2E2_3909	0.42	-0.8
4,545,046	-		Pf6N2E2_3909	0.42	+0.1
4,545,046	-		Pf6N2E2_3909	0.42	+0.9
4,545,100	+		Pf6N2E2_3909	0.48	+1.4
4,545,162	+		Pf6N2E2_3909	0.54	+1.6
4,545,162	+		Pf6N2E2_3909	0.54	+1.5
4,545,162	+		Pf6N2E2_3909	0.54	-1.2
4,545,162	+		Pf6N2E2_3909	0.54	-0.0
4,545,162	+		Pf6N2E2_3909	0.54	+0.2
4,545,163	-		Pf6N2E2_3909	0.54	-0.2
4,545,163	-		Pf6N2E2_3909	0.54	-0.7
4,545,163	-		Pf6N2E2_3909	0.54	-1.7
4,545,163	-		Pf6N2E2_3909	0.54	-0.3
4,545,163	-		Pf6N2E2_3909	0.54	-0.0
4,545,163	-		Pf6N2E2_3909	0.54	-1.1
4,545,336	+		Pf6N2E2_3909	0.72	+1.0
4,545,336	+		Pf6N2E2_3909	0.72	-0.3