Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3637 and Pf6N2E2_3638 are separated by 640 nucleotides Pf6N2E2_3638 and Pf6N2E2_3639 are separated by 716 nucleotides
Pf6N2E2_3637 - yqiA-like hydrolase, affects the cell envelope (from data) , at 4,236,906 to 4,237,514
_3637
Pf6N2E2_3638 - hypothetical protein, at 4,238,155 to 4,238,358
_3638
Pf6N2E2_3639 - 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17), at 4,239,075 to 4,239,911
_3639
Position (kb)
4238
4239 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4237.213 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.297 kb on + strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.298 kb on - strand, within Pf6N2E2_3637 at 4237.407 kb on + strand, within Pf6N2E2_3637 at 4237.407 kb on + strand, within Pf6N2E2_3637 at 4237.407 kb on + strand, within Pf6N2E2_3637 at 4237.407 kb on + strand, within Pf6N2E2_3637 at 4237.407 kb on + strand, within Pf6N2E2_3637 at 4237.408 kb on - strand, within Pf6N2E2_3637 at 4237.408 kb on - strand, within Pf6N2E2_3637 at 4237.408 kb on - strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.437 kb on + strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.438 kb on - strand, within Pf6N2E2_3637 at 4237.493 kb on + strand at 4237.494 kb on - strand at 4237.495 kb on + strand at 4237.495 kb on + strand at 4237.495 kb on + strand at 4237.495 kb on + strand at 4237.496 kb on - strand at 4237.496 kb on - strand at 4237.496 kb on - strand at 4237.502 kb on + strand at 4237.503 kb on - strand at 4237.503 kb on - strand at 4237.589 kb on + strand at 4237.590 kb on - strand at 4237.590 kb on - strand at 4237.624 kb on + strand at 4237.669 kb on - strand at 4237.669 kb on - strand at 4237.673 kb on - strand at 4237.673 kb on - strand at 4237.673 kb on - strand at 4237.699 kb on - strand at 4237.699 kb on - strand at 4237.972 kb on + strand at 4237.972 kb on + strand at 4237.972 kb on + strand at 4238.037 kb on + strand at 4238.037 kb on + strand at 4238.037 kb on + strand at 4238.037 kb on + strand at 4238.038 kb on - strand at 4238.038 kb on - strand at 4238.038 kb on - strand at 4238.038 kb on - strand at 4238.038 kb on - strand at 4238.156 kb on + strand at 4238.157 kb on - strand at 4238.157 kb on - strand at 4238.297 kb on - strand, within Pf6N2E2_3638 at 4238.318 kb on - strand, within Pf6N2E2_3638 at 4238.348 kb on - strand at 4238.408 kb on + strand at 4238.408 kb on + strand at 4238.503 kb on - strand at 4238.514 kb on + strand at 4238.514 kb on + strand at 4238.514 kb on + strand at 4238.515 kb on - strand at 4238.515 kb on - strand at 4238.515 kb on - strand at 4238.515 kb on - strand at 4238.528 kb on + strand at 4238.528 kb on + strand at 4238.528 kb on + strand at 4238.529 kb on - strand at 4238.539 kb on + strand at 4238.539 kb on + strand at 4238.540 kb on - strand at 4238.540 kb on - strand at 4238.540 kb on - strand at 4238.540 kb on - strand at 4238.540 kb on - strand at 4238.540 kb on - strand at 4238.772 kb on + strand at 4238.773 kb on - strand at 4238.773 kb on - strand at 4238.774 kb on + strand at 4238.774 kb on + strand at 4238.775 kb on - strand at 4238.834 kb on - strand at 4238.834 kb on - strand at 4238.834 kb on - strand at 4238.834 kb on - strand at 4238.873 kb on + strand at 4239.032 kb on - strand at 4239.032 kb on - strand at 4239.032 kb on - strand at 4239.032 kb on - strand at 4239.036 kb on - strand at 4239.036 kb on - strand at 4239.057 kb on + strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.058 kb on - strand at 4239.061 kb on + strand at 4239.062 kb on - strand at 4239.062 kb on - strand at 4239.062 kb on - strand at 4239.062 kb on - strand at 4239.095 kb on - strand at 4239.095 kb on - strand at 4239.095 kb on - strand at 4239.105 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 4,237,213 + Pf6N2E2_3637 0.50 -0.6 4,237,297 + Pf6N2E2_3637 0.64 -3.4 4,237,297 + Pf6N2E2_3637 0.64 +0.6 4,237,297 + Pf6N2E2_3637 0.64 -1.2 4,237,297 + Pf6N2E2_3637 0.64 +0.8 4,237,297 + Pf6N2E2_3637 0.64 -1.5 4,237,297 + Pf6N2E2_3637 0.64 -0.8 4,237,298 - Pf6N2E2_3637 0.64 -2.3 4,237,298 - Pf6N2E2_3637 0.64 +0.0 4,237,298 - Pf6N2E2_3637 0.64 -1.7 4,237,298 - Pf6N2E2_3637 0.64 -0.5 4,237,298 - Pf6N2E2_3637 0.64 -1.3 4,237,298 - Pf6N2E2_3637 0.64 -0.8 4,237,407 + Pf6N2E2_3637 0.82 -0.4 4,237,407 + Pf6N2E2_3637 0.82 +0.4 4,237,407 + Pf6N2E2_3637 0.82 -0.9 4,237,407 + Pf6N2E2_3637 0.82 -0.1 4,237,407 + Pf6N2E2_3637 0.82 -2.0 4,237,408 - Pf6N2E2_3637 0.82 -0.2 4,237,408 - Pf6N2E2_3637 0.82 -1.5 4,237,408 - Pf6N2E2_3637 0.82 +1.1 4,237,437 + Pf6N2E2_3637 0.87 -0.1 4,237,437 + Pf6N2E2_3637 0.87 -0.7 4,237,437 + Pf6N2E2_3637 0.87 +0.2 4,237,437 + Pf6N2E2_3637 0.87 +0.0 4,237,437 + Pf6N2E2_3637 0.87 -0.1 4,237,437 + Pf6N2E2_3637 0.87 -1.3 4,237,438 - Pf6N2E2_3637 0.87 -0.1 4,237,438 - Pf6N2E2_3637 0.87 -1.8 4,237,438 - Pf6N2E2_3637 0.87 +0.5 4,237,438 - Pf6N2E2_3637 0.87 +0.3 4,237,438 - Pf6N2E2_3637 0.87 -0.4 4,237,438 - Pf6N2E2_3637 0.87 -0.3 4,237,493 + -1.7 4,237,494 - -0.3 4,237,495 + -0.8 4,237,495 + -0.8 4,237,495 + -0.4 4,237,495 + -1.1 4,237,496 - -1.1 4,237,496 - -1.6 4,237,496 - +0.3 4,237,502 + -1.4 4,237,503 - +0.1 4,237,503 - +0.7 4,237,589 + +0.3 4,237,590 - -1.4 4,237,590 - +1.6 4,237,624 + -1.9 4,237,669 - +0.7 4,237,669 - -0.1 4,237,673 - +0.9 4,237,673 - +1.5 4,237,673 - -0.2 4,237,699 - +0.1 4,237,699 - +1.6 4,237,972 + +0.3 4,237,972 + +0.8 4,237,972 + -1.3 4,238,037 + +0.7 4,238,037 + +0.5 4,238,037 + +2.1 4,238,037 + +0.1 4,238,038 - -0.8 4,238,038 - +0.5 4,238,038 - +0.4 4,238,038 - -0.6 4,238,038 - +0.1 4,238,156 + +1.7 4,238,157 - +0.2 4,238,157 - +1.0 4,238,297 - Pf6N2E2_3638 0.70 -0.4 4,238,318 - Pf6N2E2_3638 0.80 -1.4 4,238,348 - +0.0 4,238,408 + +1.3 4,238,408 + -0.0 4,238,503 - -0.5 4,238,514 + +0.3 4,238,514 + -1.8 4,238,514 + +0.9 4,238,515 - -1.3 4,238,515 - -1.4 4,238,515 - +0.0 4,238,515 - +0.1 4,238,528 + +0.6 4,238,528 + +0.1 4,238,528 + +0.6 4,238,529 - -0.4 4,238,539 + -3.0 4,238,539 + +0.4 4,238,540 - +0.1 4,238,540 - +0.1 4,238,540 - -0.1 4,238,540 - -0.7 4,238,540 - +0.1 4,238,540 - -1.1 4,238,772 + -1.4 4,238,773 - +0.3 4,238,773 - -0.4 4,238,774 + +0.3 4,238,774 + +0.1 4,238,775 - +0.4 4,238,834 - +0.7 4,238,834 - +1.2 4,238,834 - -2.9 4,238,834 - +0.9 4,238,873 + -0.6 4,239,032 - +2.9 4,239,032 - -0.7 4,239,032 - -0.2 4,239,032 - +0.6 4,239,036 - +0.6 4,239,036 - +1.1 4,239,057 + +1.3 4,239,058 - -0.5 4,239,058 - +0.3 4,239,058 - +1.5 4,239,058 - +0.1 4,239,058 - +0.8 4,239,058 - +0.8 4,239,058 - -0.3 4,239,058 - +0.3 4,239,061 + +1.1 4,239,062 - +1.1 4,239,062 - -1.3 4,239,062 - -1.0 4,239,062 - -0.2 4,239,095 - -0.6 4,239,095 - +0.4 4,239,095 - +0.7 4,239,105 - +0.6
Or see this region's nucleotide sequence