Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3560

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
4,150,907	+		Pf6N2E2_3559	0.40	+0.4
4,150,907	+		Pf6N2E2_3559	0.40	+0.7
4,150,907	+		Pf6N2E2_3559	0.40	-0.6
4,151,141	+		Pf6N2E2_3559	0.59	+0.3
4,151,141	+		Pf6N2E2_3559	0.59	+2.7
4,151,141	+		Pf6N2E2_3559	0.59	+1.0
4,151,141	+		Pf6N2E2_3559	0.59	+0.2
4,151,142	-		Pf6N2E2_3559	0.59	+0.6
4,151,142	-		Pf6N2E2_3559	0.59	+0.6
4,151,142	-		Pf6N2E2_3559	0.59	+0.5
4,151,198	+		Pf6N2E2_3559	0.63	+1.6
4,151,198	+		Pf6N2E2_3559	0.63	+1.2
4,151,199	-		Pf6N2E2_3559	0.63	-0.1
4,151,199	-		Pf6N2E2_3559	0.63	-0.6
4,151,602	+				-1.1
4,151,602	+				+0.7
4,151,602	+				+1.7
4,151,602	+				+1.0
4,151,603	-				+0.3
4,151,793	+				-1.3
4,151,839	+				-0.3
4,151,839	+				-2.2
4,151,839	+				+0.0
4,151,839	+				+1.7
4,151,840	-				-0.6
4,151,840	-				-2.3
4,151,840	-				-0.5
4,151,840	-				-3.4
4,151,840	-				-0.9
4,151,845	+				-1.4
4,151,845	+				+0.1
4,151,845	+				-1.3
4,151,846	-				-0.1
4,151,849	-				-1.0
4,151,849	-				-0.6
4,151,849	-				+0.3
4,151,849	-				-1.2
4,151,849	-				-0.2
4,151,849	-				-0.6
4,151,968	+		Pf6N2E2_3560	0.16	-0.1
4,151,968	+		Pf6N2E2_3560	0.16	-0.3
4,151,968	+		Pf6N2E2_3560	0.16	-0.9
4,151,968	+		Pf6N2E2_3560	0.16	-1.3
4,151,969	-		Pf6N2E2_3560	0.16	-0.7
4,151,969	-		Pf6N2E2_3560	0.16	-1.4
4,151,995	+		Pf6N2E2_3560	0.19	-0.3
4,152,133	-		Pf6N2E2_3560	0.33	-0.9
4,152,460	+		Pf6N2E2_3560	0.65	-0.2
4,152,460	+		Pf6N2E2_3560	0.65	-0.1
4,152,460	+		Pf6N2E2_3560	0.65	-0.1
4,152,461	-		Pf6N2E2_3560	0.65	-3.4
4,152,461	-		Pf6N2E2_3560	0.65	-0.5
4,152,815	+				-0.9
4,152,815	+				+1.7
4,152,815	+				+0.2
4,152,816	-				-0.5
4,152,816	-				+0.2
4,152,816	-				+1.3
4,152,816	-				-0.2
4,152,887	+				+0.6
4,152,887	+				-0.1
4,152,887	+				+0.6
4,152,921	+				+0.7
4,153,036	-				-0.2
4,153,124	-		Pf6N2E2_3561	0.31	+0.7
4,153,124	-		Pf6N2E2_3561	0.31	+1.7
4,153,280	+		Pf6N2E2_3561	0.85	-0.2
4,153,281	-		Pf6N2E2_3561	0.86	+0.0
4,153,370	+				+1.1
4,153,371	-				+0.7
4,153,384	+				+0.6
4,153,384	+				+1.3
4,153,384	+				+1.5
4,153,385	-				+1.1
4,153,385	-				+0.9
4,153,385	-				+1.1
4,153,385	-				-0.1
4,153,461	-				+0.9
4,153,610	+		Pf6N2E2_3562	0.17	-1.3
4,153,666	+		Pf6N2E2_3562	0.23	+0.2
4,153,748	+		Pf6N2E2_3562	0.32	-0.9
4,153,748	+		Pf6N2E2_3562	0.32	-0.2
4,153,748	+		Pf6N2E2_3562	0.32	+0.9
4,153,748	+		Pf6N2E2_3562	0.32	+0.7
4,153,748	+		Pf6N2E2_3562	0.32	+0.2
4,153,749	-		Pf6N2E2_3562	0.33	+1.9
4,153,749	-		Pf6N2E2_3562	0.33	-0.8
4,153,749	-		Pf6N2E2_3562	0.33	-1.5
4,153,749	-		Pf6N2E2_3562	0.33	+0.8
4,153,749	-		Pf6N2E2_3562	0.33	+0.6
4,153,749	-		Pf6N2E2_3562	0.33	+0.1
4,153,751	+		Pf6N2E2_3562	0.33	+0.4