Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3504

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
4,082,936	-		Pf6N2E2_3502	0.70	+0.3
4,082,973	-		Pf6N2E2_3502	0.73	+0.2
4,083,042	+		Pf6N2E2_3502	0.80	-0.4
4,083,346	+		Pf6N2E2_3503	0.13	+0.6
4,083,346	+		Pf6N2E2_3503	0.13	+0.3
4,083,400	+		Pf6N2E2_3503	0.28	+0.1
4,083,400	+		Pf6N2E2_3503	0.28	-0.4
4,083,400	+		Pf6N2E2_3503	0.28	+0.2
4,083,401	-		Pf6N2E2_3503	0.29	-0.5
4,083,401	-		Pf6N2E2_3503	0.29	+1.0
4,083,401	-		Pf6N2E2_3503	0.29	-0.3
4,083,401	-		Pf6N2E2_3503	0.29	+1.1
4,083,472	-		Pf6N2E2_3503	0.49	+0.1
4,083,524	+		Pf6N2E2_3503	0.64	-1.3
4,083,569	+		Pf6N2E2_3503	0.77	+0.6
4,083,570	-		Pf6N2E2_3503	0.77	+0.8
4,083,570	-		Pf6N2E2_3503	0.77	-0.3
4,083,582	+		Pf6N2E2_3503	0.80	+0.3
4,083,582	+		Pf6N2E2_3503	0.80	-1.3
4,083,583	-		Pf6N2E2_3503	0.81	+0.1
4,083,583	-		Pf6N2E2_3503	0.81	+0.0
4,083,583	-		Pf6N2E2_3503	0.81	-0.7
4,083,583	-		Pf6N2E2_3503	0.81	-0.8
4,083,589	+		Pf6N2E2_3503	0.82	-1.3
4,083,590	-		Pf6N2E2_3503	0.83	+0.6
4,083,590	-		Pf6N2E2_3503	0.83	-1.3
4,083,602	-		Pf6N2E2_3503	0.86	+0.2
4,083,610	+		Pf6N2E2_3503	0.88	-1.5
4,083,611	-		Pf6N2E2_3503	0.89	+0.0
4,083,611	-		Pf6N2E2_3503	0.89	-0.7
4,083,627	-				-0.4
4,083,627	-				-0.0
4,083,640	+				+0.5
4,083,640	+				-1.3
4,083,640	+				-0.3
4,083,641	-				+1.1
4,083,648	+				-1.1
4,083,648	+				-1.2
4,083,663	+				+0.6
4,083,710	+				+0.1
4,083,710	+				+0.2
4,083,711	-				+0.5
4,083,740	+				-3.0
4,083,820	+				-0.2
4,084,025	+				-1.1
4,084,025	+				-2.0
4,084,073	+				-2.8
4,084,073	+				-2.4
4,084,097	+		Pf6N2E2_3504	0.11	-2.3
4,084,097	+		Pf6N2E2_3504	0.11	-1.7
4,084,097	+		Pf6N2E2_3504	0.11	-1.7
4,084,097	+		Pf6N2E2_3504	0.11	-2.6
4,084,187	+		Pf6N2E2_3504	0.16	-0.1
4,084,187	+		Pf6N2E2_3504	0.16	-1.5
4,084,187	+		Pf6N2E2_3504	0.16	-2.3
4,084,188	-		Pf6N2E2_3504	0.16	-2.2
4,084,250	+		Pf6N2E2_3504	0.19	-2.6
4,084,250	+		Pf6N2E2_3504	0.19	+0.7
4,084,251	-		Pf6N2E2_3504	0.19	-0.5
4,084,406	+		Pf6N2E2_3504	0.27	-1.4
4,084,406	+		Pf6N2E2_3504	0.27	-2.1
4,084,406	+		Pf6N2E2_3504	0.27	-0.8
4,084,406	+		Pf6N2E2_3504	0.27	-2.7
4,084,406	+		Pf6N2E2_3504	0.27	-2.9
4,084,407	-		Pf6N2E2_3504	0.27	-2.6
4,084,407	-		Pf6N2E2_3504	0.27	-1.9
4,084,407	-		Pf6N2E2_3504	0.27	-2.7
4,084,407	-		Pf6N2E2_3504	0.27	-2.1
4,084,407	-		Pf6N2E2_3504	0.27	-1.6
4,084,441	+		Pf6N2E2_3504	0.29	-1.2
4,084,441	+		Pf6N2E2_3504	0.29	-1.1
4,084,505	+		Pf6N2E2_3504	0.32	-1.0
4,084,506	-		Pf6N2E2_3504	0.32	-1.3
4,084,506	-		Pf6N2E2_3504	0.32	+0.0
4,084,506	-		Pf6N2E2_3504	0.32	-2.5
4,084,557	-		Pf6N2E2_3504	0.35	+0.0
4,084,557	-		Pf6N2E2_3504	0.35	-3.9
4,084,580	+		Pf6N2E2_3504	0.36	-0.4
4,084,580	+		Pf6N2E2_3504	0.36	-2.9
4,084,580	+		Pf6N2E2_3504	0.36	-0.7
4,084,581	-		Pf6N2E2_3504	0.36	-1.7
4,084,581	-		Pf6N2E2_3504	0.36	-2.9
4,084,581	-		Pf6N2E2_3504	0.36	-1.5
4,084,581	-		Pf6N2E2_3504	0.36	-0.9
4,084,599	-		Pf6N2E2_3504	0.37	-2.4
4,084,863	-		Pf6N2E2_3504	0.51	-1.2
4,084,902	-		Pf6N2E2_3504	0.53	-0.5
4,084,970	+		Pf6N2E2_3504	0.57	-2.1
4,084,970	+		Pf6N2E2_3504	0.57	-1.5
4,085,003	+		Pf6N2E2_3504	0.58	-0.8
4,085,331	-		Pf6N2E2_3504	0.75	-2.8
4,085,331	-		Pf6N2E2_3504	0.75	-0.1
4,085,492	+		Pf6N2E2_3504	0.84	-1.5
4,085,492	+		Pf6N2E2_3504	0.84	-1.7
4,085,493	-		Pf6N2E2_3504	0.84	-0.6
4,085,493	-		Pf6N2E2_3504	0.84	-1.2
4,085,493	-		Pf6N2E2_3504	0.84	-3.3
4,085,505	-		Pf6N2E2_3504	0.85	-1.5
4,085,811	-				-1.1
4,085,812	+				+0.3
4,085,812	+				-1.0
4,085,813	-				-1.7
4,085,813	-				-0.2
4,085,856	+				+1.3
4,085,857	-				+1.0
4,085,857	-				-1.0
4,085,892	+				-3.5
4,085,892	+				-0.4
4,085,893	-				+0.5
4,085,918	-				+0.4
4,085,918	-				+2.2
4,086,338	+		Pf6N2E2_3505	0.88	-1.8
4,086,338	+		Pf6N2E2_3505	0.88	-0.9
4,086,552	+				-0.6
4,086,552	+				-1.8
4,086,553	-				+1.4
4,086,553	-				+0.6
4,086,554	+				-1.1
4,086,555	-				+0.0
4,086,555	-				+1.3
4,086,591	+				+0.0
4,086,591	+				-1.4
4,086,592	-				-0.1
4,086,624	+		Pf6N2E2_3506	0.14	+0.0
4,086,624	+		Pf6N2E2_3506	0.14	-1.8
4,086,625	-		Pf6N2E2_3506	0.14	+1.2
4,086,768	+		Pf6N2E2_3506	0.41	-0.5