Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3336

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
3,857,866	-		Pf6N2E2_3335	0.66	+0.3
3,857,867	+		Pf6N2E2_3335	0.66	+0.7
3,857,867	+		Pf6N2E2_3335	0.66	+0.3
3,857,868	-		Pf6N2E2_3335	0.66	-0.3
3,857,868	-		Pf6N2E2_3335	0.66	-3.7
3,857,868	-		Pf6N2E2_3335	0.66	+0.0
3,857,868	-		Pf6N2E2_3335	0.66	+0.3
3,857,868	-		Pf6N2E2_3335	0.66	-1.3
3,857,868	-		Pf6N2E2_3335	0.66	-1.7
3,858,134	+		Pf6N2E2_3335	0.77	-0.5
3,858,134	+		Pf6N2E2_3335	0.77	+0.0
3,858,135	-		Pf6N2E2_3335	0.77	-2.0
3,858,390	+		Pf6N2E2_3335	0.87	-0.2
3,858,390	+		Pf6N2E2_3335	0.87	-0.8
3,858,530	+				-0.1
3,858,530	+				-0.6
3,858,531	-				-0.9
3,858,599	+				-2.6
3,858,599	+				+0.8
3,858,599	+				-2.6
3,858,599	+				+0.9
3,858,599	+				-0.8
3,858,600	-				+0.3
3,858,600	-				+0.3
3,858,600	-				-0.8
3,858,600	-				-1.2
3,858,600	-				-1.7
3,858,600	-				+0.2
3,858,600	-				+0.3
3,858,600	-				+0.5
3,858,716	+				+0.5
3,858,717	-				-0.1
3,858,825	+				+0.9
3,858,825	+				-1.5
3,858,825	+				+0.0
3,858,825	+				+0.3
3,858,825	+				+0.6
3,858,825	+				-0.2
3,858,825	+				+0.3
3,858,825	+				-1.6
3,858,825	+				-0.1
3,858,826	-				-0.4
3,858,826	-				+0.5
3,858,826	-				+0.4
3,858,826	-				+1.6
3,859,138	+		Pf6N2E2_3336	0.18	+0.5
3,859,139	-		Pf6N2E2_3336	0.18	+0.3
3,859,156	+		Pf6N2E2_3336	0.19	+0.6
3,859,156	+		Pf6N2E2_3336	0.19	+0.4
3,859,157	-		Pf6N2E2_3336	0.19	-0.2
3,859,157	-		Pf6N2E2_3336	0.19	-1.6
3,859,157	-		Pf6N2E2_3336	0.19	+0.3
3,859,157	-		Pf6N2E2_3336	0.19	+0.1
3,859,183	+		Pf6N2E2_3336	0.21	+1.0
3,859,183	+		Pf6N2E2_3336	0.21	+0.5
3,859,183	+		Pf6N2E2_3336	0.21	+0.6
3,859,183	+		Pf6N2E2_3336	0.21	+0.5
3,859,183	+		Pf6N2E2_3336	0.21	+0.4
3,859,183	+		Pf6N2E2_3336	0.21	+0.4
3,859,183	+		Pf6N2E2_3336	0.21	+0.6
3,859,183	+		Pf6N2E2_3336	0.21	+0.1
3,859,183	+		Pf6N2E2_3336	0.21	+0.3
3,859,183	+		Pf6N2E2_3336	0.21	+0.9
3,859,183	-		Pf6N2E2_3336	0.21	+1.2
3,859,184	-		Pf6N2E2_3336	0.21	+1.1
3,859,184	-		Pf6N2E2_3336	0.21	+0.7
3,859,184	-		Pf6N2E2_3336	0.21	+0.7
3,859,184	-		Pf6N2E2_3336	0.21	-0.5
3,859,184	-		Pf6N2E2_3336	0.21	+1.1
3,859,184	-		Pf6N2E2_3336	0.21	+0.9
3,859,184	-		Pf6N2E2_3336	0.21	-1.1
3,859,184	-		Pf6N2E2_3336	0.21	-0.5
3,859,210	+		Pf6N2E2_3336	0.23	+1.0
3,859,210	+		Pf6N2E2_3336	0.23	+0.4
3,859,211	-		Pf6N2E2_3336	0.23	+0.2
3,859,512	-		Pf6N2E2_3336	0.42	-0.6
3,859,512	-		Pf6N2E2_3336	0.42	+0.4
3,859,512	-		Pf6N2E2_3336	0.42	-0.0
3,859,517	-		Pf6N2E2_3336	0.43	-0.4
3,859,561	+		Pf6N2E2_3336	0.45	+0.8
3,859,693	-		Pf6N2E2_3336	0.54	+0.2
3,859,693	-		Pf6N2E2_3336	0.54	+0.8
3,859,693	-		Pf6N2E2_3336	0.54	+1.9
3,859,714	-		Pf6N2E2_3336	0.55	+1.0
3,859,735	+		Pf6N2E2_3336	0.57	+2.4
3,859,736	-		Pf6N2E2_3336	0.57	-0.6
3,859,742	-		Pf6N2E2_3336	0.57	+1.4
3,859,858	+		Pf6N2E2_3336	0.65	+0.0
3,859,858	+		Pf6N2E2_3336	0.65	-0.1
3,859,858	+		Pf6N2E2_3336	0.65	+0.3
3,859,859	-		Pf6N2E2_3336	0.65	+0.1
3,859,859	-		Pf6N2E2_3336	0.65	+0.4
3,859,859	-		Pf6N2E2_3336	0.65	+1.1
3,859,915	+		Pf6N2E2_3336	0.68	+0.7
3,859,915	+		Pf6N2E2_3336	0.68	+0.7
3,859,916	-		Pf6N2E2_3336	0.68	+0.9
3,859,916	-		Pf6N2E2_3336	0.68	+0.1
3,859,916	-		Pf6N2E2_3336	0.68	-0.2
3,859,916	-		Pf6N2E2_3336	0.68	+0.0
3,860,246	+		Pf6N2E2_3336	0.90	+0.7
3,860,246	+		Pf6N2E2_3336	0.90	-0.3
3,860,246	+		Pf6N2E2_3336	0.90	+1.8
3,860,246	+		Pf6N2E2_3336	0.90	+0.7
3,860,430	+				-0.4
3,860,430	+				-0.2
3,860,431	-				-1.9
3,860,431	-				-0.1
3,860,431	-				+0.1
3,860,489	+				+1.5
3,860,490	-				+0.5
3,860,490	-				-0.1
3,860,490	-				-0.0
3,860,490	-				+0.9
3,860,610	+				+0.2
3,860,683	+				-1.7
3,860,683	+				+1.4
3,860,684	-				-0.0
3,860,684	-				-2.3
3,860,747	+				-0.3
3,860,820	+				+0.3
3,860,820	+				-0.0
3,860,821	-				-0.2
3,860,821	-				-0.3
3,860,821	-				-0.9
3,860,821	-				+1.0
3,860,821	-				-1.2
3,860,901	+		Pf6N2E2_3337	0.11	+0.4
3,861,321	+		Pf6N2E2_3337	0.35	-0.1
3,861,321	+		Pf6N2E2_3337	0.35	+0.6
3,861,321	+		Pf6N2E2_3337	0.35	+1.2
3,861,321	+		Pf6N2E2_3337	0.35	+0.9
3,861,321	+		Pf6N2E2_3337	0.35	+0.3
3,861,322	-		Pf6N2E2_3337	0.35	-1.6
3,861,322	-		Pf6N2E2_3337	0.35	-0.7
3,861,322	-		Pf6N2E2_3337	0.35	-0.4
3,861,322	-		Pf6N2E2_3337	0.35	-3.1
3,861,322	-		Pf6N2E2_3337	0.35	-1.6