Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3158 and Pf6N2E2_3159 are separated by 736 nucleotides Pf6N2E2_3159 and Pf6N2E2_3160 overlap by 1 nucleotides
Pf6N2E2_3158 - tRNA (5-methoxyuridine) 34 synthase, at 3,651,964 to 3,652,920
_3158
Pf6N2E2_3159 - tRNA-specific adenosine-34 deaminase (EC 3.5.4.-), at 3,653,657 to 3,654,154
_3159
Pf6N2E2_3160 - Multicopper oxidase, at 3,654,154 to 3,655,530
_3160
Position (kb)
3653
3654
3655 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3652.822 kb on + strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.823 kb on - strand, within Pf6N2E2_3158 at 3652.919 kb on - strand at 3652.933 kb on + strand at 3652.934 kb on - strand at 3652.945 kb on + strand at 3652.945 kb on + strand at 3652.945 kb on + strand at 3652.946 kb on - strand at 3652.946 kb on - strand at 3652.946 kb on - strand at 3653.483 kb on + strand at 3653.602 kb on + strand at 3654.282 kb on - strand at 3654.282 kb on - strand at 3654.282 kb on - strand at 3654.399 kb on - strand, within Pf6N2E2_3160 at 3654.747 kb on - strand, within Pf6N2E2_3160 at 3654.795 kb on - strand, within Pf6N2E2_3160 at 3654.795 kb on - strand, within Pf6N2E2_3160 at 3654.795 kb on - strand, within Pf6N2E2_3160 at 3654.795 kb on - strand, within Pf6N2E2_3160 at 3654.826 kb on - strand, within Pf6N2E2_3160 at 3654.826 kb on - strand, within Pf6N2E2_3160 at 3654.831 kb on - strand, within Pf6N2E2_3160 at 3654.831 kb on - strand, within Pf6N2E2_3160 at 3654.831 kb on - strand, within Pf6N2E2_3160 at 3654.831 kb on - strand, within Pf6N2E2_3160 at 3654.831 kb on - strand, within Pf6N2E2_3160 at 3655.032 kb on - strand, within Pf6N2E2_3160 at 3655.032 kb on - strand, within Pf6N2E2_3160 at 3655.032 kb on - strand, within Pf6N2E2_3160 at 3655.032 kb on - strand, within Pf6N2E2_3160 at 3655.032 kb on - strand, within Pf6N2E2_3160 at 3655.122 kb on - strand, within Pf6N2E2_3160
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 3,652,822 + Pf6N2E2_3158 0.90 +0.6 3,652,823 - Pf6N2E2_3158 0.90 +0.3 3,652,823 - Pf6N2E2_3158 0.90 +0.5 3,652,823 - Pf6N2E2_3158 0.90 +0.9 3,652,823 - Pf6N2E2_3158 0.90 -0.3 3,652,823 - Pf6N2E2_3158 0.90 +0.1 3,652,823 - Pf6N2E2_3158 0.90 +0.3 3,652,823 - Pf6N2E2_3158 0.90 -0.8 3,652,919 - -0.5 3,652,933 + -0.8 3,652,934 - -2.5 3,652,945 + -0.6 3,652,945 + +1.0 3,652,945 + -0.6 3,652,946 - -0.6 3,652,946 - -1.2 3,652,946 - +0.0 3,653,483 + +0.7 3,653,602 + +0.4 3,654,282 - -0.2 3,654,282 - +0.1 3,654,282 - +0.2 3,654,399 - Pf6N2E2_3160 0.18 -0.5 3,654,747 - Pf6N2E2_3160 0.43 -1.3 3,654,795 - Pf6N2E2_3160 0.47 -0.5 3,654,795 - Pf6N2E2_3160 0.47 +0.7 3,654,795 - Pf6N2E2_3160 0.47 -0.2 3,654,795 - Pf6N2E2_3160 0.47 +0.7 3,654,826 - Pf6N2E2_3160 0.49 -0.9 3,654,826 - Pf6N2E2_3160 0.49 -0.1 3,654,831 - Pf6N2E2_3160 0.49 +0.0 3,654,831 - Pf6N2E2_3160 0.49 +0.4 3,654,831 - Pf6N2E2_3160 0.49 +0.9 3,654,831 - Pf6N2E2_3160 0.49 +0.8 3,654,831 - Pf6N2E2_3160 0.49 +1.9 3,655,032 - Pf6N2E2_3160 0.64 +0.6 3,655,032 - Pf6N2E2_3160 0.64 +0.7 3,655,032 - Pf6N2E2_3160 0.64 -0.2 3,655,032 - Pf6N2E2_3160 0.64 -1.7 3,655,032 - Pf6N2E2_3160 0.64 +0.9 3,655,122 - Pf6N2E2_3160 0.70 +0.7
Or see this region's nucleotide sequence