Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2531

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
2,988,622	+		Pf6N2E2_2530	0.67	-0.1
2,988,623	-		Pf6N2E2_2530	0.67	-0.6
2,988,746	+		Pf6N2E2_2530	0.72	-0.4
2,988,746	+		Pf6N2E2_2530	0.72	+0.4
2,989,201	+				-1.9
2,989,201	+				-0.5
2,989,202	-				+0.8
2,989,202	-				-0.8
2,989,238	-				-0.7
2,989,238	-				-0.1
2,989,249	+				-1.0
2,989,250	-				-1.8
2,989,252	+				+0.3
2,989,252	+				-0.5
2,989,252	+				-3.6
2,989,252	+				-0.1
2,989,252	+				+0.0
2,989,252	+				-1.1
2,989,252	+				+0.1
2,989,253	-				-0.7
2,989,253	-				-1.9
2,989,253	-				+0.2
2,989,253	-				+0.1
2,989,253	-				-0.0
2,989,253	-				-0.8
2,989,253	-				-0.1
2,989,253	-				+0.2
2,989,253	-				+0.4
2,989,253	-				+0.5
2,989,253	-				+0.7
2,989,253	-				-1.9
2,989,253	-				-0.9
2,989,253	-				-0.8
2,989,253	-				+0.2
2,989,253	-				-0.9
2,989,325	-				+0.2
2,989,325	-				-0.3
2,989,357	-				+0.7
2,989,389	+				-3.1
2,989,446	-				-0.3
2,989,493	+				+1.2
2,989,493	+				-1.5
2,989,494	-				-0.4
2,989,498	+				-1.5
2,989,499	-				+1.6
2,989,595	-				-1.5
2,989,595	-				-0.1
2,989,595	-				+0.3
2,989,649	+				-0.1
2,989,649	+				-0.4
2,989,649	+				+0.0
2,989,649	+				-0.5
2,989,650	-				-0.0
2,989,650	-				-0.3
2,989,650	-				-0.5
2,989,662	-				+1.1
2,989,827	-		Pf6N2E2_2531	0.11	-0.1
2,989,891	+		Pf6N2E2_2531	0.15	-2.8
2,989,891	+		Pf6N2E2_2531	0.15	-1.4
2,989,892	-		Pf6N2E2_2531	0.15	+0.3
2,990,077	-		Pf6N2E2_2531	0.25	+0.6
2,990,192	+		Pf6N2E2_2531	0.31	+0.1
2,990,192	+		Pf6N2E2_2531	0.31	-1.2
2,990,193	-		Pf6N2E2_2531	0.31	+0.6
2,990,385	-		Pf6N2E2_2531	0.42	-0.3
2,990,448	-		Pf6N2E2_2531	0.45	+0.1
2,990,456	+		Pf6N2E2_2531	0.46	-1.4
2,990,456	+		Pf6N2E2_2531	0.46	-1.1
2,990,457	-		Pf6N2E2_2531	0.46	+0.3
2,990,504	+		Pf6N2E2_2531	0.48	+1.0
2,990,505	-		Pf6N2E2_2531	0.49	+1.1
2,990,581	-		Pf6N2E2_2531	0.53	+1.4
2,990,654	+		Pf6N2E2_2531	0.57	-0.3
2,990,834	+		Pf6N2E2_2531	0.67	-0.0
2,990,835	-		Pf6N2E2_2531	0.67	-0.1
2,990,835	-		Pf6N2E2_2531	0.67	+0.0
2,991,081	-		Pf6N2E2_2531	0.80	+2.3
2,991,186	-		Pf6N2E2_2531	0.86	-0.1
2,991,286	+				-0.5
2,991,287	-				-0.4
2,991,357	+				-0.6
2,991,423	+				-0.7
2,991,423	+				-0.1
2,991,423	+				-0.7
2,991,423	+				-0.7
2,991,423	+				+0.7
2,991,423	+				-0.5
2,991,423	+				-0.5
2,991,424	-				+0.1
2,991,424	-				-1.7
2,991,424	-				+0.5
2,991,424	-				-1.4
2,991,717	+		Pf6N2E2_2532	0.44	+0.3
2,991,717	+		Pf6N2E2_2532	0.44	+0.2
2,991,717	+		Pf6N2E2_2532	0.44	-0.4
2,991,718	-		Pf6N2E2_2532	0.44	+0.3
2,991,718	-		Pf6N2E2_2532	0.44	+0.3
2,991,814	-		Pf6N2E2_2532	0.59	-1.8
2,991,897	+		Pf6N2E2_2532	0.72	+0.8
2,991,897	+		Pf6N2E2_2532	0.72	-0.5
2,991,898	-		Pf6N2E2_2532	0.72	+0.1
2,991,992	+		Pf6N2E2_2532	0.87	-0.2
2,991,993	-		Pf6N2E2_2532	0.87	+0.2
2,992,053	+				-0.7
2,992,053	+				+0.5
2,992,053	+				-2.4
2,992,053	+				-1.5
2,992,053	+				-0.7
2,992,054	-				+0.2
2,992,054	-				+0.3
2,992,101	+				+1.3
2,992,101	+				+0.6
2,992,101	+				+0.1
2,992,102	-				-0.9
2,992,102	-				+0.9
2,992,102	-				+0.2
2,992,102	-				-0.8
2,992,233	+		Pf6N2E2_2533	0.17	-0.2
2,992,233	+		Pf6N2E2_2533	0.17	+0.5
2,992,233	+		Pf6N2E2_2533	0.17	-0.1
2,992,233	+		Pf6N2E2_2533	0.17	+0.0
2,992,233	+		Pf6N2E2_2533	0.17	+1.5
2,992,234	-		Pf6N2E2_2533	0.17	+0.0
2,992,234	-		Pf6N2E2_2533	0.17	+1.1
2,992,234	-		Pf6N2E2_2533	0.17	-0.5
2,992,234	-		Pf6N2E2_2533	0.17	+0.7
2,992,234	-		Pf6N2E2_2533	0.17	-0.5
2,992,234	-		Pf6N2E2_2533	0.17	-2.4
2,992,234	-		Pf6N2E2_2533	0.17	-1.7
2,992,234	-		Pf6N2E2_2533	0.17	+0.1
2,992,256	+		Pf6N2E2_2533	0.19	+0.6
2,992,256	+		Pf6N2E2_2533	0.19	+1.0
2,992,257	-		Pf6N2E2_2533	0.19	+0.2
2,992,257	-		Pf6N2E2_2533	0.19	+0.9
2,992,257	-		Pf6N2E2_2533	0.19	-0.0
2,992,257	-		Pf6N2E2_2533	0.19	-0.2
2,992,257	-		Pf6N2E2_2533	0.19	+0.5
2,992,270	+		Pf6N2E2_2533	0.21	+0.9
2,992,294	-		Pf6N2E2_2533	0.23	-0.4
2,992,294	-		Pf6N2E2_2533	0.23	+0.6
2,992,294	-		Pf6N2E2_2533	0.23	+0.6
2,992,419	+		Pf6N2E2_2533	0.36	+1.5
2,992,419	+		Pf6N2E2_2533	0.36	+1.5
2,992,420	-		Pf6N2E2_2533	0.37	-1.7
2,992,420	-		Pf6N2E2_2533	0.37	-2.3
2,992,420	-		Pf6N2E2_2533	0.37	+0.3