Experiment: Phosphomycin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2523 and Pf6N2E2_2524 are separated by 136 nucleotides Pf6N2E2_2524 and Pf6N2E2_2525 are separated by 61 nucleotides Pf6N2E2_2525 and Pf6N2E2_2526 are separated by 4 nucleotides
Pf6N2E2_2523 - Methylthioribose-1-phosphate isomerase (EC 5.3.1.23), at 2,979,842 to 2,980,888
_2523
Pf6N2E2_2524 - S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase, at 2,981,025 to 2,982,356
_2524
Pf6N2E2_2525 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 2,982,418 to 2,983,116
_2525
Pf6N2E2_2526 - Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase, at 2,983,121 to 2,983,792
_2526
Position (kb)
2981
2982
2983 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.141 kb on + strand, within Pf6N2E2_2523 at 2980.142 kb on - strand, within Pf6N2E2_2523 at 2980.332 kb on + strand, within Pf6N2E2_2523 at 2980.333 kb on - strand, within Pf6N2E2_2523 at 2980.358 kb on - strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.854 kb on + strand at 2980.855 kb on - strand at 2980.855 kb on - strand at 2980.954 kb on + strand at 2980.955 kb on - strand at 2980.955 kb on - strand at 2980.956 kb on + strand at 2980.957 kb on - strand at 2980.957 kb on - strand at 2980.984 kb on + strand at 2980.986 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.003 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.056 kb on + strand at 2981.056 kb on + strand at 2981.098 kb on + strand at 2981.098 kb on + strand at 2981.353 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.427 kb on + strand, within Pf6N2E2_2524 at 2981.615 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524 at 2982.186 kb on + strand, within Pf6N2E2_2524 at 2982.186 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.210 kb on + strand, within Pf6N2E2_2524 at 2982.232 kb on + strand at 2982.354 kb on + strand at 2983.114 kb on + strand at 2983.114 kb on + strand at 2983.115 kb on - strand at 2983.115 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.004 mg/ml remove 2,980,137 + Pf6N2E2_2523 0.28 -1.3 2,980,137 + Pf6N2E2_2523 0.28 +0.9 2,980,137 + Pf6N2E2_2523 0.28 -2.7 2,980,137 + Pf6N2E2_2523 0.28 -2.5 2,980,137 + Pf6N2E2_2523 0.28 -0.2 2,980,137 + Pf6N2E2_2523 0.28 -0.0 2,980,137 + Pf6N2E2_2523 0.28 +0.0 2,980,137 + Pf6N2E2_2523 0.28 -1.6 2,980,137 + Pf6N2E2_2523 0.28 -0.7 2,980,137 + Pf6N2E2_2523 0.28 -1.2 2,980,138 - Pf6N2E2_2523 0.28 +1.6 2,980,138 - Pf6N2E2_2523 0.28 -0.2 2,980,138 - Pf6N2E2_2523 0.28 +1.1 2,980,138 - Pf6N2E2_2523 0.28 +0.1 2,980,138 - Pf6N2E2_2523 0.28 -0.1 2,980,141 + Pf6N2E2_2523 0.29 -1.0 2,980,142 - Pf6N2E2_2523 0.29 +0.7 2,980,332 + Pf6N2E2_2523 0.47 -0.7 2,980,333 - Pf6N2E2_2523 0.47 -0.3 2,980,358 - Pf6N2E2_2523 0.49 -0.2 2,980,359 + Pf6N2E2_2523 0.49 -0.4 2,980,359 + Pf6N2E2_2523 0.49 -0.3 2,980,359 + Pf6N2E2_2523 0.49 -0.1 2,980,359 + Pf6N2E2_2523 0.49 +0.6 2,980,360 - Pf6N2E2_2523 0.49 -0.1 2,980,360 - Pf6N2E2_2523 0.49 -1.2 2,980,360 - Pf6N2E2_2523 0.49 -1.3 2,980,360 - Pf6N2E2_2523 0.49 -0.5 2,980,360 - Pf6N2E2_2523 0.49 +0.9 2,980,360 - Pf6N2E2_2523 0.49 -1.3 2,980,360 - Pf6N2E2_2523 0.49 -0.2 2,980,725 + Pf6N2E2_2523 0.84 +0.0 2,980,725 + Pf6N2E2_2523 0.84 +1.7 2,980,726 - Pf6N2E2_2523 0.84 -1.1 2,980,726 - Pf6N2E2_2523 0.84 -0.6 2,980,726 - Pf6N2E2_2523 0.84 +0.4 2,980,726 - Pf6N2E2_2523 0.84 +1.3 2,980,726 - Pf6N2E2_2523 0.84 +1.1 2,980,726 - Pf6N2E2_2523 0.84 -0.1 2,980,854 + +1.4 2,980,855 - +1.1 2,980,855 - +0.6 2,980,954 + +0.1 2,980,955 - -0.5 2,980,955 - +1.2 2,980,956 + -0.2 2,980,957 - +0.9 2,980,957 - +0.8 2,980,984 + +0.3 2,980,986 + +0.1 2,981,001 + +1.6 2,981,001 + -1.0 2,981,001 + +1.8 2,981,003 + -0.3 2,981,053 + +1.8 2,981,053 + +0.4 2,981,053 + -0.3 2,981,053 + -0.0 2,981,053 + -1.4 2,981,053 + -0.4 2,981,056 + -0.2 2,981,056 + -0.3 2,981,098 + -0.6 2,981,098 + -0.1 2,981,353 + Pf6N2E2_2524 0.25 -0.6 2,981,421 + Pf6N2E2_2524 0.30 +0.3 2,981,421 + Pf6N2E2_2524 0.30 +0.3 2,981,421 + Pf6N2E2_2524 0.30 -1.7 2,981,421 + Pf6N2E2_2524 0.30 +1.5 2,981,421 + Pf6N2E2_2524 0.30 +1.2 2,981,421 + Pf6N2E2_2524 0.30 -1.2 2,981,421 + Pf6N2E2_2524 0.30 -1.1 2,981,421 + Pf6N2E2_2524 0.30 +0.4 2,981,421 + Pf6N2E2_2524 0.30 -0.7 2,981,421 + Pf6N2E2_2524 0.30 +0.9 2,981,421 + Pf6N2E2_2524 0.30 -0.8 2,981,421 + Pf6N2E2_2524 0.30 +0.7 2,981,427 + Pf6N2E2_2524 0.30 +1.1 2,981,615 + Pf6N2E2_2524 0.44 +2.0 2,981,681 + Pf6N2E2_2524 0.49 +0.6 2,981,681 + Pf6N2E2_2524 0.49 +0.8 2,981,681 + Pf6N2E2_2524 0.49 -0.9 2,981,682 - Pf6N2E2_2524 0.49 -0.7 2,981,682 - Pf6N2E2_2524 0.49 +2.4 2,982,186 + Pf6N2E2_2524 0.87 +0.4 2,982,186 + Pf6N2E2_2524 0.87 +0.4 2,982,210 + Pf6N2E2_2524 0.89 +1.5 2,982,210 + Pf6N2E2_2524 0.89 +1.4 2,982,210 + Pf6N2E2_2524 0.89 +1.6 2,982,210 + Pf6N2E2_2524 0.89 +2.7 2,982,210 + Pf6N2E2_2524 0.89 +1.2 2,982,210 + Pf6N2E2_2524 0.89 +1.2 2,982,210 + Pf6N2E2_2524 0.89 +1.3 2,982,210 + Pf6N2E2_2524 0.89 +2.0 2,982,210 + Pf6N2E2_2524 0.89 +2.4 2,982,210 + Pf6N2E2_2524 0.89 +1.5 2,982,232 + +2.0 2,982,354 + +1.3 2,983,114 + +1.4 2,983,114 + -0.3 2,983,115 - +0.9 2,983,115 - -0.8
Or see this region's nucleotide sequence