Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2391

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
2,828,808	+		Pf6N2E2_2389	0.67	+1.6
2,828,808	+		Pf6N2E2_2389	0.67	+0.2
2,828,808	+		Pf6N2E2_2389	0.67	-0.6
2,828,809	-		Pf6N2E2_2389	0.67	+0.4
2,828,809	-		Pf6N2E2_2389	0.67	+0.1
2,828,809	-		Pf6N2E2_2389	0.67	+0.2
2,828,889	+		Pf6N2E2_2389	0.70	+0.3
2,828,889	+		Pf6N2E2_2389	0.70	+0.5
2,828,889	+		Pf6N2E2_2389	0.70	+0.1
2,828,890	-		Pf6N2E2_2389	0.70	+0.3
2,828,890	-		Pf6N2E2_2389	0.70	+0.0
2,828,890	-		Pf6N2E2_2389	0.70	-0.6
2,828,941	-		Pf6N2E2_2389	0.72	+0.1
2,829,486	-				+1.0
2,829,486	-				+1.0
2,829,505	+				+0.5
2,829,506	-				-0.3
2,829,551	+				-0.0
2,829,551	+				-1.2
2,829,551	+				+2.3
2,829,552	-				+1.2
2,829,552	-				+0.2
2,829,552	-				+2.4
2,829,552	-				+0.3
2,829,552	-				+0.2
2,829,584	+				-1.1
2,829,585	-				-0.2
2,829,585	-				+0.4
2,829,585	-				+0.9
2,829,589	-				+0.7
2,829,589	-				-1.5
2,829,589	-				+0.8
2,829,589	-				+1.1
2,829,593	+				-0.6
2,829,594	-				+0.7
2,829,613	+		Pf6N2E2_2390	0.27	-0.2
2,829,614	-		Pf6N2E2_2390	0.28	+0.5
2,829,690	+		Pf6N2E2_2390	0.64	+1.3
2,829,731	+		Pf6N2E2_2390	0.84	+0.6
2,829,761	+				+0.6
2,829,761	+				+1.5
2,829,762	-				-0.9
2,829,762	-				+3.0
2,829,824	+				+0.8
2,829,873	-		Pf6N2E2_2391	0.11	+2.6
2,829,889	+		Pf6N2E2_2391	0.13	+1.1
2,829,897	+		Pf6N2E2_2391	0.14	-0.1
2,829,897	+		Pf6N2E2_2391	0.14	+1.1
2,829,931	+		Pf6N2E2_2391	0.18	+0.9
2,829,932	-		Pf6N2E2_2391	0.18	+2.7
2,829,932	-		Pf6N2E2_2391	0.18	+2.7
2,829,932	-		Pf6N2E2_2391	0.18	+3.5
2,829,944	+		Pf6N2E2_2391	0.20	+1.3
2,829,945	-		Pf6N2E2_2391	0.20	+3.0
2,829,977	+		Pf6N2E2_2391	0.24	+3.0
2,829,978	-		Pf6N2E2_2391	0.24	+3.4
2,830,101	+		Pf6N2E2_2391	0.39	+0.5
2,830,143	+		Pf6N2E2_2391	0.44	+0.8
2,830,143	+		Pf6N2E2_2391	0.44	+1.4
2,830,143	+		Pf6N2E2_2391	0.44	+0.6
2,830,143	+		Pf6N2E2_2391	0.44	+2.8
2,830,143	+		Pf6N2E2_2391	0.44	+1.4
2,830,143	+		Pf6N2E2_2391	0.44	+1.4
2,830,144	-		Pf6N2E2_2391	0.44	+0.6
2,830,144	-		Pf6N2E2_2391	0.44	+1.9
2,830,144	-		Pf6N2E2_2391	0.44	+2.3
2,830,144	-				+2.0
2,830,206	+		Pf6N2E2_2391	0.52	+2.1
2,830,206	+		Pf6N2E2_2391	0.52	+1.4
2,830,209	+		Pf6N2E2_2391	0.52	+1.5
2,830,210	-		Pf6N2E2_2391	0.52	+3.3
2,830,210	-		Pf6N2E2_2391	0.52	+3.1
2,830,210	-		Pf6N2E2_2391	0.52	+2.5
2,830,231	+		Pf6N2E2_2391	0.55	+1.3
2,830,232	-		Pf6N2E2_2391	0.55	+3.0
2,830,232	-		Pf6N2E2_2391	0.55	+2.2
2,830,253	+		Pf6N2E2_2391	0.57	+2.3
2,830,272	+		Pf6N2E2_2391	0.60	+0.5
2,830,272	+		Pf6N2E2_2391	0.60	+1.9
2,830,273	-		Pf6N2E2_2391	0.60	+1.4
2,830,308	+		Pf6N2E2_2391	0.64	+1.1
2,830,308	+		Pf6N2E2_2391	0.64	+1.3
2,830,309	-		Pf6N2E2_2391	0.64	+3.3
2,830,455	+		Pf6N2E2_2391	0.82	+2.2
2,830,455	+		Pf6N2E2_2391	0.82	-0.6
2,830,455	+		Pf6N2E2_2391	0.82	+2.2
2,830,455	+		Pf6N2E2_2391	0.82	+1.7
2,830,455	+		Pf6N2E2_2391	0.82	+1.8
2,830,456	-		Pf6N2E2_2391	0.82	+3.2
2,830,512	-		Pf6N2E2_2391	0.89	+2.4
2,830,512	-		Pf6N2E2_2391	0.89	+2.4
2,830,512	-		Pf6N2E2_2391	0.89	+2.6
2,830,599	+				+0.2
2,830,736	-				+1.1
2,830,975	+		Pf6N2E2_2392	0.28	-0.1
2,830,975	+		Pf6N2E2_2392	0.28	-0.1
2,830,975	+		Pf6N2E2_2392	0.28	-0.5
2,830,975	+		Pf6N2E2_2392	0.28	+2.8
2,830,975	+		Pf6N2E2_2392	0.28	-0.2
2,830,976	-		Pf6N2E2_2392	0.29	+1.2
2,830,976	-		Pf6N2E2_2392	0.29	+1.3
2,830,976	-		Pf6N2E2_2392	0.29	-0.0
2,830,976	-		Pf6N2E2_2392	0.29	-0.4
2,831,182	+		Pf6N2E2_2392	0.53	+0.8
2,831,182	+		Pf6N2E2_2392	0.53	+0.2
2,831,182	+		Pf6N2E2_2392	0.53	+0.4
2,831,182	+		Pf6N2E2_2392	0.53	-1.1
2,831,182	+		Pf6N2E2_2392	0.53	-0.1
2,831,182	+		Pf6N2E2_2392	0.53	+0.7
2,831,183	-		Pf6N2E2_2392	0.53	+1.4
2,831,183	-		Pf6N2E2_2392	0.53	+0.7
2,831,262	-		Pf6N2E2_2392	0.62	+1.1
2,831,287	+		Pf6N2E2_2392	0.65	+1.2
2,831,320	+		Pf6N2E2_2392	0.69	+0.5
2,831,320	+		Pf6N2E2_2392	0.69	-0.6
2,831,320	+		Pf6N2E2_2392	0.69	-0.2
2,831,320	+		Pf6N2E2_2392	0.69	+0.8
2,831,321	-		Pf6N2E2_2392	0.69	+0.3
2,831,437	+		Pf6N2E2_2392	0.83	+0.9