Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2339

Experiment: Phosphomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.004 mg/ml
2,770,181	-				-1.1
2,770,316	+				-2.2
2,770,316	+				+1.0
2,770,316	+				-1.0
2,770,316	+				-0.1
2,770,316	+				+0.9
2,770,316	+				-1.1
2,770,316	+				+1.3
2,770,316	+				+0.5
2,770,316	+				-0.5
2,770,316	+				+0.3
2,770,317	-				+1.0
2,770,317	-				-0.2
2,770,317	-				-0.9
2,770,317	-				+0.1
2,770,320	+				-1.3
2,770,320	+				-0.3
2,770,320	+				-0.2
2,770,320	+				+1.3
2,770,320	+				-2.0
2,770,320	+				+0.6
2,770,320	+				-1.9
2,770,321	-				-0.6
2,770,321	-				-0.8
2,770,321	-				-1.9
2,770,321	-				-2.4
2,770,321	-				+1.9
2,770,321	-				+0.3
2,770,321	-				+2.0
2,770,321	-				-0.4
2,770,482	+		Pf6N2E2_2338	0.20	-1.1
2,770,482	+		Pf6N2E2_2338	0.20	-0.5
2,770,483	-		Pf6N2E2_2338	0.20	+1.2
2,770,483	-		Pf6N2E2_2338	0.20	+1.5
2,770,483	-		Pf6N2E2_2338	0.20	-1.2
2,770,483	-		Pf6N2E2_2338	0.20	+0.3
2,770,815	+		Pf6N2E2_2338	0.59	+0.3
2,770,815	+		Pf6N2E2_2338	0.59	+0.1
2,770,815	+		Pf6N2E2_2338	0.59	+1.2
2,770,816	-		Pf6N2E2_2338	0.59	-1.0
2,770,816	-		Pf6N2E2_2338	0.59	-0.0
2,770,816	-		Pf6N2E2_2338	0.59	+0.2
2,770,894	-		Pf6N2E2_2338	0.68	-0.4
2,771,070	+		Pf6N2E2_2338	0.89	-0.6
2,771,070	+		Pf6N2E2_2338	0.89	+0.0
2,771,070	+		Pf6N2E2_2338	0.89	-0.2
2,771,070	+		Pf6N2E2_2338	0.89	+0.1
2,771,070	+		Pf6N2E2_2338	0.89	+0.4
2,771,070	+		Pf6N2E2_2338	0.89	+0.2
2,771,070	+		Pf6N2E2_2338	0.89	+0.4
2,771,070	+		Pf6N2E2_2338	0.89	-1.0
2,771,070	+		Pf6N2E2_2338	0.89	+1.8
2,771,071	-		Pf6N2E2_2338	0.89	+1.3
2,771,071	-		Pf6N2E2_2338	0.89	+0.1
2,771,071	-		Pf6N2E2_2338	0.89	+0.4
2,771,071	-		Pf6N2E2_2338	0.89	-0.1
2,771,071	-		Pf6N2E2_2338	0.89	+1.0
2,771,071	-		Pf6N2E2_2338	0.89	+0.2
2,771,071	-		Pf6N2E2_2338	0.89	+0.2
2,771,071	-		Pf6N2E2_2338	0.89	-0.2
2,771,126	-				-0.5
2,771,261	-				+0.8
2,771,261	-				-0.1
2,771,261	-				+0.3
2,771,261	-				-0.1
2,771,267	-				-1.1
2,771,267	-				-0.6
2,771,267	-				+1.0
2,771,267	-				-0.3
2,771,447	-		Pf6N2E2_2339	0.21	+1.1
2,771,479	+		Pf6N2E2_2339	0.23	-2.5
2,771,479	+		Pf6N2E2_2339	0.23	+0.7
2,771,479	+		Pf6N2E2_2339	0.23	-0.8
2,771,479	+		Pf6N2E2_2339	0.23	-0.5
2,771,479	+		Pf6N2E2_2339	0.23	-2.5
2,771,479	+		Pf6N2E2_2339	0.23	-1.6
2,771,479	+		Pf6N2E2_2339	0.23	+1.7
2,771,479	+		Pf6N2E2_2339	0.23	-0.2
2,771,480	-		Pf6N2E2_2339	0.23	-0.5
2,771,480	-		Pf6N2E2_2339	0.23	+0.6
2,771,480	-		Pf6N2E2_2339	0.23	+0.7
2,771,695	+		Pf6N2E2_2339	0.40	+0.7
2,771,695	+		Pf6N2E2_2339	0.40	-0.7
2,771,695	+		Pf6N2E2_2339	0.40	+0.0
2,771,722	+		Pf6N2E2_2339	0.42	-0.8
2,771,776	+		Pf6N2E2_2339	0.46	-0.4
2,771,863	+		Pf6N2E2_2339	0.52	+0.6
2,771,864	-		Pf6N2E2_2339	0.52	+0.8
2,771,864	-		Pf6N2E2_2339	0.52	-0.7
2,771,864	-		Pf6N2E2_2339	0.52	-0.3
2,771,864	-		Pf6N2E2_2339	0.52	+0.2
2,771,864	-		Pf6N2E2_2339	0.52	-0.9
2,771,950	+		Pf6N2E2_2339	0.59	-1.6
2,771,950	+		Pf6N2E2_2339	0.59	-0.0
2,771,951	-		Pf6N2E2_2339	0.59	-0.0
2,772,131	+		Pf6N2E2_2339	0.73	-0.2
2,772,131	+		Pf6N2E2_2339	0.73	+0.0
2,772,131	+		Pf6N2E2_2339	0.73	-0.5
2,772,196	+		Pf6N2E2_2339	0.78	-0.9
2,772,196	+		Pf6N2E2_2339	0.78	+0.5
2,772,196	+		Pf6N2E2_2339	0.78	-1.6
2,772,196	+		Pf6N2E2_2339	0.78	+0.9
2,772,197	-		Pf6N2E2_2339	0.78	+0.5
2,772,197	-		Pf6N2E2_2339	0.78	+0.8
2,772,197	-		Pf6N2E2_2339	0.78	+2.0
2,772,197	-		Pf6N2E2_2339	0.78	-1.5
2,772,197	-		Pf6N2E2_2339	0.78	-1.2
2,772,247	+		Pf6N2E2_2339	0.82	+0.2
2,772,343	+		Pf6N2E2_2339	0.89	-0.9
2,772,344	-		Pf6N2E2_2339	0.89	-0.2
2,772,344	-		Pf6N2E2_2339	0.89	-0.0
2,772,451	+				+1.5
2,772,451	+				-1.0
2,772,451	+				+0.9
2,772,452	-				+0.2
2,772,452	-				-0.6
2,772,452	-				-0.6
2,772,463	-				-1.5
2,772,731	+		Pf6N2E2_2340	0.14	-2.2
2,772,853	+		Pf6N2E2_2340	0.30	-1.7
2,773,208	+		Pf6N2E2_2340	0.76	-0.4
2,773,301	+		Pf6N2E2_2340	0.88	-0.5
2,773,302	-		Pf6N2E2_2340	0.88	+1.3
2,773,309	+		Pf6N2E2_2340	0.89	-1.2
2,773,309	+		Pf6N2E2_2340	0.89	+0.2
2,773,309	+		Pf6N2E2_2340	0.89	-1.9
2,773,310	-		Pf6N2E2_2340	0.89	-1.4
2,773,435	+				-3.1
2,773,436	-				+0.8
2,773,436	-				-2.4
2,773,464	-				+1.6