Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_833 and Ac3H11_834 are separated by 54 nucleotides Ac3H11_834 and Ac3H11_835 are separated by 159 nucleotides Ac3H11_835 and Ac3H11_836 are separated by 44 nucleotides
Ac3H11_833 - 2-keto-4-pentenoate hydratase (EC 4.2.1.80), at 116,717 to 117,511
_833
Ac3H11_834 - putative signal peptide protein, at 117,566 to 118,021
_834
Ac3H11_835 - hypothetical protein, at 118,181 to 118,561
_835
Ac3H11_836 - Ubiquinone biosynthesis monooxygenase UbiB, at 118,606 to 119,946
_836
Position (kb) 118
119 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 117.730 kb on - strand, within Ac3H11_834 at 117.735 kb on + strand, within Ac3H11_834 at 117.736 kb on - strand, within Ac3H11_834 at 117.873 kb on + strand, within Ac3H11_834 at 117.873 kb on + strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.995 kb on + strand at 117.996 kb on - strand at 117.996 kb on - strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.555 kb on + strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.556 kb on - strand at 118.880 kb on + strand, within Ac3H11_836 at 118.880 kb on + strand, within Ac3H11_836 at 118.880 kb on + strand, within Ac3H11_836 at 118.880 kb on + strand, within Ac3H11_836 at 118.881 kb on - strand, within Ac3H11_836 at 118.881 kb on - strand, within Ac3H11_836 at 118.881 kb on - strand, within Ac3H11_836 at 118.881 kb on - strand, within Ac3H11_836 at 118.925 kb on + strand at 118.926 kb on - strand, within Ac3H11_836 at 119.339 kb on + strand, within Ac3H11_836 at 119.339 kb on + strand, within Ac3H11_836 at 119.340 kb on - strand, within Ac3H11_836 at 119.340 kb on - strand, within Ac3H11_836 at 119.340 kb on - strand, within Ac3H11_836 at 119.492 kb on + strand, within Ac3H11_836 at 119.492 kb on + strand, within Ac3H11_836 at 119.492 kb on + strand, within Ac3H11_836 at 119.492 kb on + strand, within Ac3H11_836 at 119.493 kb on - strand, within Ac3H11_836
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 117,730 - Ac3H11_834 0.36 -0.0 117,735 + Ac3H11_834 0.37 +0.1 117,736 - Ac3H11_834 0.37 -1.4 117,873 + Ac3H11_834 0.67 +0.2 117,873 + Ac3H11_834 0.67 -0.2 117,874 - Ac3H11_834 0.68 -0.2 117,874 - Ac3H11_834 0.68 -2.1 117,874 - Ac3H11_834 0.68 +1.3 117,874 - Ac3H11_834 0.68 +1.0 117,874 - Ac3H11_834 0.68 +0.4 117,995 + +0.5 117,996 - -0.8 117,996 - +0.9 118,092 + -0.4 118,092 + +1.7 118,092 + +0.0 118,092 + +0.4 118,093 - -1.6 118,093 - +0.5 118,093 - -0.7 118,093 - +1.6 118,093 - +0.1 118,093 - -0.7 118,093 - +1.1 118,555 + -2.3 118,555 + -0.0 118,555 + +1.1 118,555 + +3.1 118,555 + -0.7 118,555 + -1.5 118,555 + -0.2 118,555 + -0.1 118,555 + +0.9 118,555 + +0.0 118,555 + -0.5 118,555 + -0.1 118,555 + +1.4 118,555 + -0.3 118,555 + +0.4 118,555 + -2.3 118,556 - +0.5 118,556 - +0.5 118,556 - -0.1 118,556 - +0.5 118,556 - -0.7 118,556 - +1.2 118,556 - -0.9 118,556 - -0.7 118,556 - +0.6 118,556 - +0.1 118,556 - +0.6 118,556 - -0.1 118,556 - +0.3 118,556 - -0.3 118,556 - +0.5 118,880 + Ac3H11_836 0.20 +0.1 118,880 + Ac3H11_836 0.20 +0.9 118,880 + Ac3H11_836 0.20 -0.9 118,880 + Ac3H11_836 0.20 +0.3 118,881 - Ac3H11_836 0.21 -0.2 118,881 - Ac3H11_836 0.21 +1.9 118,881 - Ac3H11_836 0.21 +0.7 118,881 - Ac3H11_836 0.21 +0.2 118,925 + +1.5 118,926 - Ac3H11_836 0.24 +1.9 119,339 + Ac3H11_836 0.55 +0.2 119,339 + Ac3H11_836 0.55 +0.4 119,340 - Ac3H11_836 0.55 +0.4 119,340 - Ac3H11_836 0.55 +0.7 119,340 - Ac3H11_836 0.55 +0.2 119,492 + Ac3H11_836 0.66 +1.0 119,492 + Ac3H11_836 0.66 -0.5 119,492 + Ac3H11_836 0.66 -0.8 119,492 + Ac3H11_836 0.66 +0.1 119,493 - Ac3H11_836 0.66 +0.2
Or see this region's nucleotide sequence