Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4503 and Ac3H11_4504 are separated by 147 nucleotides Ac3H11_4504 and Ac3H11_4505 are separated by 264 nucleotides Ac3H11_4505 and Ac3H11_4506 are separated by 21 nucleotides Ac3H11_4506 and Ac3H11_4507 are separated by 102 nucleotides
Ac3H11_4503 - Ammonia monooxygenase, at 97,295 to 98,377
_4503
Ac3H11_4504 - FIG00932573: hypothetical protein, at 98,525 to 98,824
_4504
Ac3H11_4505 - Putative PROLIN-rich signal peptide protein, at 99,089 to 100,255
_4505
Ac3H11_4506 - Transcriptional regulator, IclR family, at 100,277 to 101,059
_4506
Ac3H11_4507 - Fumarylacetoacetate hydrolase family protein, at 101,162 to 102,175
_4507
Position (kb) 99
100
101 Strain fitness (log2 ratio) -2
-1
0
1
2 at 98.330 kb on + strand at 98.330 kb on + strand at 98.330 kb on + strand at 98.331 kb on - strand at 98.331 kb on - strand at 98.342 kb on + strand at 98.342 kb on + strand at 98.342 kb on + strand at 98.342 kb on + strand at 98.343 kb on - strand at 98.343 kb on - strand at 98.343 kb on - strand at 98.343 kb on - strand at 98.343 kb on - strand at 98.481 kb on + strand at 98.482 kb on - strand at 98.482 kb on - strand at 98.482 kb on - strand at 98.526 kb on + strand at 98.526 kb on + strand at 98.526 kb on + strand at 98.526 kb on + strand at 98.526 kb on + strand at 98.526 kb on + strand at 98.527 kb on - strand at 98.527 kb on - strand at 98.527 kb on - strand at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.661 kb on + strand, within Ac3H11_4504 at 98.662 kb on - strand, within Ac3H11_4504 at 98.662 kb on - strand, within Ac3H11_4504 at 98.662 kb on - strand, within Ac3H11_4504 at 98.662 kb on - strand, within Ac3H11_4504 at 98.662 kb on - strand, within Ac3H11_4504 at 98.811 kb on + strand at 98.811 kb on + strand at 98.812 kb on - strand at 98.812 kb on - strand at 98.812 kb on - strand at 98.812 kb on - strand at 98.812 kb on - strand at 98.992 kb on + strand at 98.992 kb on + strand at 98.992 kb on + strand at 98.992 kb on + strand at 98.993 kb on - strand at 98.993 kb on - strand at 98.993 kb on - strand at 99.168 kb on + strand at 99.168 kb on + strand at 99.168 kb on + strand at 99.210 kb on + strand, within Ac3H11_4505 at 99.210 kb on + strand, within Ac3H11_4505 at 99.211 kb on - strand, within Ac3H11_4505 at 99.211 kb on - strand, within Ac3H11_4505 at 99.211 kb on - strand, within Ac3H11_4505 at 99.481 kb on - strand, within Ac3H11_4505 at 99.481 kb on - strand, within Ac3H11_4505 at 99.619 kb on - strand, within Ac3H11_4505 at 99.619 kb on - strand, within Ac3H11_4505 at 99.664 kb on - strand, within Ac3H11_4505 at 99.664 kb on - strand, within Ac3H11_4505 at 99.664 kb on - strand, within Ac3H11_4505 at 99.860 kb on + strand, within Ac3H11_4505 at 100.462 kb on + strand, within Ac3H11_4506 at 100.463 kb on - strand, within Ac3H11_4506 at 100.920 kb on + strand, within Ac3H11_4506 at 101.067 kb on - strand at 101.100 kb on + strand at 101.111 kb on - strand at 101.111 kb on - strand at 101.174 kb on - strand at 101.177 kb on + strand at 101.177 kb on + strand at 101.177 kb on + strand at 101.177 kb on + strand at 101.178 kb on - strand at 101.178 kb on - strand at 101.178 kb on - strand at 101.178 kb on - strand at 101.240 kb on + strand at 101.241 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 98,330 + -2.0 98,330 + -0.8 98,330 + +0.6 98,331 - +1.0 98,331 - -2.5 98,342 + -0.7 98,342 + -1.0 98,342 + +1.1 98,342 + -1.9 98,343 - -0.3 98,343 - +1.0 98,343 - -0.8 98,343 - +0.0 98,343 - +1.6 98,481 + +1.0 98,482 - +0.1 98,482 - +1.6 98,482 - +0.4 98,526 + -0.8 98,526 + -0.4 98,526 + -0.9 98,526 + -0.2 98,526 + -0.5 98,526 + -1.6 98,527 - -0.3 98,527 - +0.4 98,527 - +1.6 98,661 + Ac3H11_4504 0.45 -0.9 98,661 + Ac3H11_4504 0.45 +0.4 98,661 + Ac3H11_4504 0.45 +0.8 98,661 + Ac3H11_4504 0.45 +0.9 98,661 + Ac3H11_4504 0.45 +0.1 98,661 + Ac3H11_4504 0.45 -0.6 98,661 + Ac3H11_4504 0.45 +0.3 98,661 + Ac3H11_4504 0.45 -1.8 98,661 + Ac3H11_4504 0.45 +1.0 98,661 + Ac3H11_4504 0.45 +0.8 98,661 + Ac3H11_4504 0.45 +0.3 98,662 - Ac3H11_4504 0.46 +0.1 98,662 - Ac3H11_4504 0.46 -0.5 98,662 - Ac3H11_4504 0.46 -1.7 98,662 - Ac3H11_4504 0.46 -0.4 98,662 - Ac3H11_4504 0.46 +1.1 98,811 + +2.3 98,811 + -0.3 98,812 - -0.8 98,812 - -0.6 98,812 - +0.3 98,812 - +0.9 98,812 - -0.2 98,992 + -2.2 98,992 + +0.1 98,992 + -1.2 98,992 + -0.6 98,993 - +2.6 98,993 - +0.5 98,993 - -0.7 99,168 + -0.2 99,168 + +0.1 99,168 + +0.3 99,210 + Ac3H11_4505 0.10 -1.3 99,210 + Ac3H11_4505 0.10 -0.2 99,211 - Ac3H11_4505 0.10 -1.0 99,211 - Ac3H11_4505 0.10 -0.3 99,211 - Ac3H11_4505 0.10 -0.5 99,481 - Ac3H11_4505 0.34 -0.7 99,481 - Ac3H11_4505 0.34 +0.3 99,619 - Ac3H11_4505 0.45 -0.6 99,619 - Ac3H11_4505 0.45 -0.6 99,664 - Ac3H11_4505 0.49 +0.3 99,664 - Ac3H11_4505 0.49 +0.2 99,664 - Ac3H11_4505 0.49 -0.4 99,860 + Ac3H11_4505 0.66 -1.9 100,462 + Ac3H11_4506 0.24 -0.1 100,463 - Ac3H11_4506 0.24 +0.6 100,920 + Ac3H11_4506 0.82 -1.4 101,067 - +1.2 101,100 + -0.5 101,111 - +0.8 101,111 - -1.3 101,174 - -2.0 101,177 + -2.0 101,177 + -0.0 101,177 + -0.6 101,177 + -0.0 101,178 - -1.5 101,178 - -0.2 101,178 - -1.8 101,178 - -2.0 101,240 + -1.0 101,241 - -1.2
Or see this region's nucleotide sequence