Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_3940
Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.06 mg/ml |
---|---|---|---|---|---|
remove | |||||
158,860 | - | -0.2 | |||
158,940 | + | -0.4 | |||
159,110 | + | +1.0 | |||
159,270 | + | +1.1 | |||
159,271 | - | -1.5 | |||
159,271 | - | +2.0 | |||
159,271 | - | +1.4 | |||
159,279 | + | -0.1 | |||
159,279 | + | -0.2 | |||
159,280 | - | -0.9 | |||
159,343 | + | +1.0 | |||
159,509 | - | +0.2 | |||
159,509 | - | +0.1 | |||
159,595 | + | +1.2 | |||
159,595 | + | +2.0 | |||
159,724 | + | -2.0 | |||
159,724 | + | -1.5 | |||
159,724 | + | +1.1 | |||
159,724 | + | -0.3 | |||
159,724 | + | -1.2 | |||
159,724 | + | -2.2 | |||
159,725 | - | +0.4 | |||
159,725 | - | +0.4 | |||
159,725 | - | -0.2 | |||
159,730 | + | -0.6 | |||
159,730 | + | -0.9 | |||
159,731 | - | -1.5 | |||
159,731 | - | +0.1 | |||
159,731 | - | -0.5 | |||
159,731 | - | +1.3 | |||
159,733 | + | -0.1 | |||
159,734 | - | +0.4 | |||
159,734 | - | +0.4 | |||
159,734 | - | -1.9 | |||
159,862 | + | Ac3H11_3941 | 0.11 | -1.3 | |
160,058 | - | Ac3H11_3941 | 0.14 | +0.5 | |
160,058 | - | Ac3H11_3941 | 0.14 | -0.7 | |
160,112 | - | Ac3H11_3941 | 0.15 | -0.5 | |
160,174 | + | Ac3H11_3941 | 0.16 | -1.2 | |
160,175 | - | Ac3H11_3941 | 0.16 | +0.5 | |
160,175 | - | Ac3H11_3941 | 0.16 | -0.9 |
Or see this region's nucleotide sequence