Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_3195

Experiment: Phosphomycin 0.06 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_3194 and Ac3H11_3195 are separated by 143 nucleotidesAc3H11_3195 and Ac3H11_3196 are separated by 302 nucleotides Ac3H11_3194 - FIG022979: MoxR-like ATPases, at 96,028 to 96,948 _3194 Ac3H11_3195 - FIG002343: hypothetical protein, at 97,092 to 98,126 _3195 Ac3H11_3196 - FIG001454: Transglutaminase-like enzymes, putative cysteine proteases, at 98,429 to 100,477 _3196 Position (kb) 97 98 99Strain fitness (log2 ratio) -2 -1 0 1 2at 96.274 kb on + strand, within Ac3H11_3194at 96.274 kb on + strand, within Ac3H11_3194at 96.274 kb on + strand, within Ac3H11_3194at 96.275 kb on - strand, within Ac3H11_3194at 96.694 kb on + strand, within Ac3H11_3194at 96.694 kb on + strand, within Ac3H11_3194at 96.694 kb on + strand, within Ac3H11_3194at 96.695 kb on - strand, within Ac3H11_3194at 96.695 kb on - strand, within Ac3H11_3194at 96.695 kb on - strand, within Ac3H11_3194at 96.695 kb on - strand, within Ac3H11_3194at 96.695 kb on - strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.817 kb on + strand, within Ac3H11_3194at 96.818 kb on - strand, within Ac3H11_3194at 96.818 kb on - strand, within Ac3H11_3194at 96.905 kb on + strandat 97.036 kb on + strandat 97.037 kb on - strandat 97.037 kb on - strandat 97.242 kb on + strand, within Ac3H11_3195at 97.242 kb on + strand, within Ac3H11_3195at 97.242 kb on + strand, within Ac3H11_3195at 97.242 kb on + strand, within Ac3H11_3195at 97.242 kb on + strand, within Ac3H11_3195at 97.242 kb on + strand, within Ac3H11_3195at 97.243 kb on - strand, within Ac3H11_3195at 97.243 kb on - strand, within Ac3H11_3195at 97.243 kb on - strand, within Ac3H11_3195at 97.243 kb on - strand, within Ac3H11_3195at 97.243 kb on - strand, within Ac3H11_3195at 97.314 kb on + strand, within Ac3H11_3195at 97.314 kb on + strand, within Ac3H11_3195at 97.314 kb on + strand, within Ac3H11_3195at 97.314 kb on + strand, within Ac3H11_3195at 97.315 kb on - strand, within Ac3H11_3195at 97.315 kb on - strand, within Ac3H11_3195at 97.315 kb on - strand, within Ac3H11_3195at 97.315 kb on - strand, within Ac3H11_3195at 97.315 kb on - strand, within Ac3H11_3195at 98.037 kb on + strandat 98.037 kb on + strandat 98.038 kb on - strandat 98.124 kb on + strandat 98.124 kb on + strandat 98.125 kb on - strandat 98.125 kb on - strandat 98.128 kb on - strandat 98.362 kb on - strandat 98.663 kb on + strand, within Ac3H11_3196at 98.663 kb on + strand, within Ac3H11_3196at 98.663 kb on + strand, within Ac3H11_3196at 98.663 kb on + strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196at 98.664 kb on - strand, within Ac3H11_3196

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Per-strain Table

Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml
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96,274 + Ac3H11_3194 0.27 +0.6
96,274 + Ac3H11_3194 0.27 +0.0
96,274 + Ac3H11_3194 0.27 -0.2
96,275 - Ac3H11_3194 0.27 -0.7
96,694 + Ac3H11_3194 0.72 +1.9
96,694 + Ac3H11_3194 0.72 -0.9
96,694 + Ac3H11_3194 0.72 -0.1
96,695 - Ac3H11_3194 0.72 +0.1
96,695 - Ac3H11_3194 0.72 +0.2
96,695 - Ac3H11_3194 0.72 -1.0
96,695 - Ac3H11_3194 0.72 -0.5
96,695 - Ac3H11_3194 0.72 +0.4
96,817 + Ac3H11_3194 0.86 -0.2
96,817 + Ac3H11_3194 0.86 +0.7
96,817 + Ac3H11_3194 0.86 -0.9
96,817 + Ac3H11_3194 0.86 +0.3
96,817 + Ac3H11_3194 0.86 -0.5
96,817 + Ac3H11_3194 0.86 -1.2
96,817 + Ac3H11_3194 0.86 +0.3
96,818 - Ac3H11_3194 0.86 -0.5
96,818 - Ac3H11_3194 0.86 -0.8
96,905 + +0.7
97,036 + +1.9
97,037 - -1.3
97,037 - -0.1
97,242 + Ac3H11_3195 0.14 +1.6
97,242 + Ac3H11_3195 0.14 -0.0
97,242 + Ac3H11_3195 0.14 -0.3
97,242 + Ac3H11_3195 0.14 +0.9
97,242 + Ac3H11_3195 0.14 +0.1
97,242 + Ac3H11_3195 0.14 +1.2
97,243 - Ac3H11_3195 0.15 +0.2
97,243 - Ac3H11_3195 0.15 -0.3
97,243 - Ac3H11_3195 0.15 +1.0
97,243 - Ac3H11_3195 0.15 -1.0
97,243 - Ac3H11_3195 0.15 +0.9
97,314 + Ac3H11_3195 0.21 +0.3
97,314 + Ac3H11_3195 0.21 -0.2
97,314 + Ac3H11_3195 0.21 -1.9
97,314 + Ac3H11_3195 0.21 -1.2
97,315 - Ac3H11_3195 0.22 +0.2
97,315 - Ac3H11_3195 0.22 +0.5
97,315 - Ac3H11_3195 0.22 -0.6
97,315 - Ac3H11_3195 0.22 -0.4
97,315 - Ac3H11_3195 0.22 +0.7
98,037 + -1.3
98,037 + -0.6
98,038 - +0.4
98,124 + +0.7
98,124 + -1.9
98,125 - -1.7
98,125 - -0.4
98,128 - -1.0
98,362 - -0.4
98,663 + Ac3H11_3196 0.11 +1.5
98,663 + Ac3H11_3196 0.11 +0.7
98,663 + Ac3H11_3196 0.11 +0.9
98,663 + Ac3H11_3196 0.11 -1.8
98,664 - Ac3H11_3196 0.11 -0.7
98,664 - Ac3H11_3196 0.11 -1.5
98,664 - Ac3H11_3196 0.11 -2.4
98,664 - Ac3H11_3196 0.11 +0.3
98,664 - Ac3H11_3196 0.11 -0.4
98,664 - Ac3H11_3196 0.11 +0.1
98,664 - Ac3H11_3196 0.11 +0.7

Or see this region's nucleotide sequence