Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_308 and Ac3H11_309 are separated by 207 nucleotides Ac3H11_309 and Ac3H11_310 are separated by 42 nucleotides Ac3H11_310 and Ac3H11_311 are separated by 383 nucleotides Ac3H11_311 and Ac3H11_312 are separated by 93 nucleotides
Ac3H11_308 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 129,028 to 130,491
_308
Ac3H11_309 - hypothetical protein, at 130,699 to 131,031
_309
Ac3H11_310 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 131,074 to 132,654
_310
Ac3H11_311 - hypothetical protein, at 133,038 to 133,157
_311
Ac3H11_312 - DedA protein, at 133,251 to 133,964
_312
Position (kb) 131
132
133 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 130.489 kb on + strand at 130.489 kb on + strand at 130.489 kb on + strand at 130.490 kb on - strand at 130.490 kb on - strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.607 kb on - strand at 132.059 kb on + strand, within Ac3H11_310 at 132.116 kb on + strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.117 kb on - strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.146 kb on + strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.147 kb on - strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.150 kb on + strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.151 kb on - strand, within Ac3H11_310 at 132.248 kb on + strand, within Ac3H11_310 at 132.248 kb on + strand, within Ac3H11_310 at 132.317 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.374 kb on + strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.375 kb on - strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.438 kb on + strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.439 kb on - strand, within Ac3H11_310 at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.669 kb on + strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.670 kb on - strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.737 kb on + strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.738 kb on - strand at 132.745 kb on + strand at 132.745 kb on + strand at 132.745 kb on + strand at 132.746 kb on - strand at 132.791 kb on - strand at 132.813 kb on + strand at 132.813 kb on + strand at 132.813 kb on + strand at 132.814 kb on - strand at 132.814 kb on - strand at 132.814 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.841 kb on - strand at 132.887 kb on - strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.912 kb on + strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.913 kb on - strand at 132.935 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 130,489 + +0.9 130,489 + -0.1 130,489 + -2.5 130,490 - +0.3 130,490 - -0.5 130,606 + +0.3 130,606 + -0.9 130,606 + -0.4 130,606 + -0.3 130,606 + +0.4 130,606 + +0.3 130,607 - -2.0 130,607 - +0.7 130,607 - -0.9 130,607 - -0.6 130,607 - -1.2 130,607 - +0.2 132,059 + Ac3H11_310 0.62 -0.4 132,116 + Ac3H11_310 0.66 +0.2 132,117 - Ac3H11_310 0.66 +0.5 132,117 - Ac3H11_310 0.66 +0.2 132,117 - Ac3H11_310 0.66 -0.4 132,117 - Ac3H11_310 0.66 +0.9 132,146 + Ac3H11_310 0.68 +0.4 132,146 + Ac3H11_310 0.68 +1.6 132,146 + Ac3H11_310 0.68 -1.0 132,146 + Ac3H11_310 0.68 -1.2 132,146 + Ac3H11_310 0.68 +0.0 132,146 + Ac3H11_310 0.68 +0.5 132,146 + Ac3H11_310 0.68 -1.5 132,146 + Ac3H11_310 0.68 +0.2 132,146 + Ac3H11_310 0.68 +0.4 132,146 + Ac3H11_310 0.68 +2.1 132,146 + Ac3H11_310 0.68 +0.8 132,146 + Ac3H11_310 0.68 -1.7 132,146 + Ac3H11_310 0.68 +0.2 132,146 + Ac3H11_310 0.68 -0.2 132,146 + Ac3H11_310 0.68 +1.5 132,147 - Ac3H11_310 0.68 -1.3 132,147 - Ac3H11_310 0.68 +0.1 132,147 - Ac3H11_310 0.68 +0.6 132,147 - Ac3H11_310 0.68 -0.0 132,147 - Ac3H11_310 0.68 -1.2 132,147 - Ac3H11_310 0.68 -1.0 132,147 - Ac3H11_310 0.68 +0.5 132,147 - Ac3H11_310 0.68 -2.5 132,147 - Ac3H11_310 0.68 +1.6 132,150 + Ac3H11_310 0.68 +0.2 132,150 + Ac3H11_310 0.68 -0.4 132,150 + Ac3H11_310 0.68 -0.9 132,150 + Ac3H11_310 0.68 +0.9 132,151 - Ac3H11_310 0.68 -0.2 132,151 - Ac3H11_310 0.68 -2.4 132,151 - Ac3H11_310 0.68 +0.1 132,151 - Ac3H11_310 0.68 -1.0 132,151 - Ac3H11_310 0.68 +0.9 132,151 - Ac3H11_310 0.68 -2.5 132,151 - Ac3H11_310 0.68 +0.8 132,248 + Ac3H11_310 0.74 +0.6 132,248 + Ac3H11_310 0.74 +1.1 132,317 + Ac3H11_310 0.79 -1.9 132,374 + Ac3H11_310 0.82 +0.4 132,374 + Ac3H11_310 0.82 +1.3 132,374 + Ac3H11_310 0.82 -2.3 132,374 + Ac3H11_310 0.82 -1.1 132,374 + Ac3H11_310 0.82 +1.1 132,374 + Ac3H11_310 0.82 -0.9 132,375 - Ac3H11_310 0.82 -0.8 132,375 - Ac3H11_310 0.82 -1.1 132,375 - Ac3H11_310 0.82 +0.0 132,375 - Ac3H11_310 0.82 -0.1 132,438 + Ac3H11_310 0.86 +0.4 132,438 + Ac3H11_310 0.86 -0.5 132,438 + Ac3H11_310 0.86 +1.2 132,438 + Ac3H11_310 0.86 +0.3 132,438 + Ac3H11_310 0.86 +0.8 132,439 - Ac3H11_310 0.86 +0.3 132,439 - Ac3H11_310 0.86 +1.0 132,439 - Ac3H11_310 0.86 +0.5 132,439 - Ac3H11_310 0.86 +1.1 132,439 - Ac3H11_310 0.86 -1.1 132,439 - Ac3H11_310 0.86 -1.9 132,439 - Ac3H11_310 0.86 -0.0 132,439 - Ac3H11_310 0.86 +0.6 132,439 - Ac3H11_310 0.86 -0.9 132,439 - Ac3H11_310 0.86 +0.0 132,439 - Ac3H11_310 0.86 +1.3 132,439 - Ac3H11_310 0.86 +1.3 132,439 - Ac3H11_310 0.86 +0.8 132,669 + -0.6 132,669 + +0.1 132,669 + -0.2 132,669 + -0.1 132,669 + -1.1 132,669 + +0.3 132,669 + -0.7 132,669 + +0.0 132,669 + -0.7 132,669 + +1.1 132,670 - -1.5 132,670 - -0.6 132,670 - -0.6 132,670 - +0.4 132,670 - +0.6 132,670 - +0.3 132,670 - -0.9 132,670 - -1.2 132,737 + -0.1 132,737 + -1.2 132,737 + +0.7 132,737 + -2.6 132,737 + -3.8 132,738 - -1.3 132,738 - -0.6 132,738 - -0.3 132,738 - -0.3 132,738 - +0.4 132,738 - -0.4 132,738 - +0.5 132,738 - +0.0 132,745 + +1.9 132,745 + -3.1 132,745 + +0.3 132,746 - -0.3 132,791 - -0.5 132,813 + -0.9 132,813 + +0.5 132,813 + -0.2 132,814 - +0.3 132,814 - -0.4 132,814 - +0.2 132,841 - -3.0 132,841 - +0.6 132,841 - +0.8 132,841 - -2.5 132,887 - -0.2 132,912 + +0.7 132,912 + +0.3 132,912 + -1.4 132,912 + +0.2 132,912 + +1.3 132,912 + +0.6 132,912 + -0.6 132,913 - +1.4 132,913 - +0.7 132,913 - +1.1 132,913 - +0.8 132,913 - -0.4 132,913 - -0.4 132,913 - -0.8 132,935 - -1.2
Or see this region's nucleotide sequence