Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2539 and Ac3H11_2981 are separated by 110 nucleotides Ac3H11_2981 and Ac3H11_2540 are separated by 217 nucleotides Ac3H11_2540 and Ac3H11_2541 are separated by 230 nucleotides Ac3H11_2541 and Ac3H11_2542 are separated by 526 nucleotides
Ac3H11_2539 - Mlr1315 protein, at 816,625 to 817,491
_2539
Ac3H11_2981 - tRNA-Pro-TGG, at 817,602 to 817,675
_2981
Ac3H11_2540 - Translation initiation factor 1, at 817,893 to 818,141
_2540
Ac3H11_2541 - nitrite efflux transporter, HPP family <small>(from data)</small>, at 818,372 to 819,511
_2541
Ac3H11_2542 - Benzoate transport, extracellular ligand-binding receptor, at 820,038 to 821,225
_2542
Position (kb) 818
819
820 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 817.509 kb on + strand at 817.510 kb on - strand at 817.895 kb on - strand at 818.166 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.929 kb on - strand, within Ac3H11_2541 at 818.998 kb on + strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 819.015 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.443 kb on - strand at 819.692 kb on + strand at 819.692 kb on + strand at 819.692 kb on + strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.693 kb on - strand at 819.748 kb on + strand at 819.748 kb on + strand at 819.748 kb on + strand at 819.749 kb on - strand at 819.749 kb on - strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.752 kb on + strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.753 kb on - strand at 819.765 kb on - strand at 819.770 kb on + strand at 819.771 kb on - strand at 819.771 kb on - strand at 819.771 kb on - strand at 819.780 kb on + strand at 819.781 kb on - strand at 819.814 kb on + strand at 819.814 kb on + strand at 819.814 kb on + strand at 819.815 kb on - strand at 819.863 kb on - strand at 819.937 kb on + strand at 819.937 kb on + strand at 819.937 kb on + strand at 819.937 kb on + strand at 819.938 kb on - strand at 819.938 kb on - strand at 819.974 kb on + strand at 819.974 kb on + strand at 819.974 kb on + strand at 819.974 kb on + strand at 819.974 kb on + strand at 819.974 kb on + strand at 819.975 kb on - strand at 819.975 kb on - strand at 819.975 kb on - strand at 819.975 kb on - strand at 819.975 kb on - strand at 819.978 kb on + strand at 819.978 kb on + strand at 819.978 kb on + strand at 819.978 kb on + strand at 819.978 kb on + strand at 819.978 kb on + strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 819.979 kb on - strand at 820.001 kb on + strand at 820.002 kb on - strand at 820.012 kb on - strand at 820.012 kb on - strand at 820.164 kb on + strand, within Ac3H11_2542 at 820.164 kb on + strand, within Ac3H11_2542 at 820.164 kb on + strand, within Ac3H11_2542 at 820.165 kb on - strand, within Ac3H11_2542 at 820.165 kb on - strand, within Ac3H11_2542 at 820.494 kb on - strand, within Ac3H11_2542 at 820.494 kb on - strand, within Ac3H11_2542
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 817,509 + -0.5 817,510 - +1.7 817,895 - +0.8 818,166 - -0.2 818,213 - +0.3 818,213 - +0.1 818,213 - +0.3 818,928 + Ac3H11_2541 0.49 +0.6 818,928 + Ac3H11_2541 0.49 -0.2 818,928 + Ac3H11_2541 0.49 -0.9 818,928 + Ac3H11_2541 0.49 -0.0 818,928 + Ac3H11_2541 0.49 +0.2 818,929 - Ac3H11_2541 0.49 +1.5 818,998 + Ac3H11_2541 0.55 -1.4 818,999 - Ac3H11_2541 0.55 +0.8 818,999 - Ac3H11_2541 0.55 -0.2 818,999 - Ac3H11_2541 0.55 +0.4 818,999 - Ac3H11_2541 0.55 -0.3 819,015 + Ac3H11_2541 0.56 +0.3 819,039 + Ac3H11_2541 0.59 -0.6 819,039 + Ac3H11_2541 0.59 -0.6 819,039 + Ac3H11_2541 0.59 -1.0 819,039 + Ac3H11_2541 0.59 +1.4 819,039 + Ac3H11_2541 0.59 +0.7 819,040 - Ac3H11_2541 0.59 -2.8 819,040 - Ac3H11_2541 0.59 -0.6 819,040 - Ac3H11_2541 0.59 -0.2 819,129 + Ac3H11_2541 0.66 -0.8 819,129 + Ac3H11_2541 0.66 -0.6 819,129 + Ac3H11_2541 0.66 +0.1 819,129 + Ac3H11_2541 0.66 -1.2 819,129 + Ac3H11_2541 0.66 -0.3 819,129 + Ac3H11_2541 0.66 -0.7 819,129 + Ac3H11_2541 0.66 +0.8 819,129 + Ac3H11_2541 0.66 -0.9 819,129 + Ac3H11_2541 0.66 -2.7 819,129 + Ac3H11_2541 0.66 +0.2 819,130 - Ac3H11_2541 0.66 -2.0 819,130 - Ac3H11_2541 0.66 +0.5 819,130 - Ac3H11_2541 0.66 -2.6 819,130 - Ac3H11_2541 0.66 -0.1 819,130 - Ac3H11_2541 0.66 -1.5 819,130 - Ac3H11_2541 0.66 -1.0 819,130 - Ac3H11_2541 0.66 -0.0 819,130 - Ac3H11_2541 0.66 +0.2 819,130 - Ac3H11_2541 0.66 +0.1 819,443 - -0.4 819,692 + -0.5 819,692 + -0.2 819,692 + +2.9 819,693 - +0.2 819,693 - -0.1 819,693 - +0.5 819,693 - +1.6 819,693 - -0.6 819,693 - +1.6 819,693 - -1.4 819,748 + +0.8 819,748 + +1.2 819,748 + -0.1 819,749 - -0.1 819,749 - +0.6 819,752 + +0.7 819,752 + -2.8 819,752 + -0.6 819,752 + -2.1 819,752 + +1.4 819,752 + -0.1 819,752 + +0.4 819,752 + +1.8 819,753 - -0.3 819,753 - -1.3 819,753 - +0.1 819,753 - +1.7 819,753 - -1.0 819,753 - +0.8 819,753 - -1.7 819,753 - -0.9 819,753 - -0.3 819,753 - -1.9 819,753 - -0.4 819,753 - -0.5 819,753 - -0.1 819,753 - -2.5 819,765 - -1.2 819,770 + +0.7 819,771 - -0.1 819,771 - +1.3 819,771 - +0.9 819,780 + -0.4 819,781 - -0.2 819,814 + +0.3 819,814 + -1.7 819,814 + -1.7 819,815 - -1.2 819,863 - -0.8 819,937 + +0.2 819,937 + +0.3 819,937 + -0.8 819,937 + -0.0 819,938 - -0.6 819,938 - -1.0 819,974 + -0.5 819,974 + +1.4 819,974 + -0.9 819,974 + -0.1 819,974 + -0.2 819,974 + -2.8 819,975 - -2.0 819,975 - +0.2 819,975 - -1.0 819,975 - +0.3 819,975 - -0.1 819,978 + -0.1 819,978 + +0.3 819,978 + -0.4 819,978 + +0.6 819,978 + -0.2 819,978 + +0.6 819,979 - -0.5 819,979 - -0.1 819,979 - -0.1 819,979 - +0.7 819,979 - +0.0 819,979 - +0.6 819,979 - +0.9 819,979 - +1.5 819,979 - -1.0 819,979 - -1.0 819,979 - +1.1 820,001 + +1.2 820,002 - +0.1 820,012 - -3.2 820,012 - +0.6 820,164 + Ac3H11_2542 0.11 -0.5 820,164 + Ac3H11_2542 0.11 -2.3 820,164 + Ac3H11_2542 0.11 +0.6 820,165 - Ac3H11_2542 0.11 -0.9 820,165 - Ac3H11_2542 0.11 -0.4 820,494 - Ac3H11_2542 0.38 -0.6 820,494 - Ac3H11_2542 0.38 -0.0
Or see this region's nucleotide sequence