Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2160 and Ac3H11_2161 are separated by 535 nucleotides Ac3H11_2161 and Ac3H11_2162 are separated by 173 nucleotides Ac3H11_2162 and Ac3H11_2163 are separated by 127 nucleotides
Ac3H11_2160 - sensory box histidine kinase/response regulator, at 389,157 to 389,822
_2160
Ac3H11_2161 - Hemerythrin-like protein RSc0777, at 390,358 to 390,894
_2161
Ac3H11_2162 - Cell division protein FtsL, at 391,068 to 391,667
_2162
Ac3H11_2163 - UPF0337 protein yjbJ, at 391,795 to 392,013
_2163
Position (kb) 390
391 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 389.637 kb on - strand, within Ac3H11_2160 at 389.637 kb on - strand, within Ac3H11_2160 at 389.816 kb on + strand at 389.849 kb on + strand at 389.849 kb on + strand at 389.885 kb on + strand at 389.885 kb on + strand at 389.886 kb on - strand at 390.095 kb on + strand at 390.095 kb on + strand at 390.273 kb on - strand at 390.898 kb on + strand at 390.899 kb on - strand at 390.955 kb on + strand at 390.956 kb on - strand at 390.977 kb on + strand at 391.081 kb on + strand at 391.081 kb on + strand at 391.081 kb on + strand at 391.081 kb on + strand at 391.081 kb on + strand at 391.081 kb on + strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.082 kb on - strand at 391.159 kb on + strand, within Ac3H11_2162 at 391.159 kb on + strand, within Ac3H11_2162 at 391.159 kb on + strand, within Ac3H11_2162 at 391.159 kb on + strand, within Ac3H11_2162 at 391.160 kb on - strand, within Ac3H11_2162 at 391.160 kb on - strand, within Ac3H11_2162 at 391.160 kb on - strand, within Ac3H11_2162 at 391.160 kb on - strand, within Ac3H11_2162 at 391.160 kb on - strand, within Ac3H11_2162 at 391.378 kb on + strand, within Ac3H11_2162 at 391.378 kb on + strand, within Ac3H11_2162 at 391.379 kb on - strand, within Ac3H11_2162 at 391.379 kb on - strand, within Ac3H11_2162 at 391.435 kb on + strand, within Ac3H11_2162 at 391.436 kb on - strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.546 kb on + strand, within Ac3H11_2162 at 391.547 kb on - strand, within Ac3H11_2162 at 391.547 kb on - strand, within Ac3H11_2162 at 391.610 kb on + strand at 391.610 kb on + strand at 391.610 kb on + strand at 391.611 kb on - strand at 391.611 kb on - strand at 391.611 kb on - strand at 391.692 kb on - strand at 391.692 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 389,637 - Ac3H11_2160 0.72 -0.9 389,637 - Ac3H11_2160 0.72 -0.2 389,816 + -0.1 389,849 + +1.4 389,849 + +0.1 389,885 + -1.9 389,885 + +1.4 389,886 - -0.6 390,095 + -0.9 390,095 + -1.8 390,273 - -0.3 390,898 + -0.6 390,899 - +0.4 390,955 + -2.0 390,956 - -0.0 390,977 + -1.0 391,081 + -0.4 391,081 + -2.3 391,081 + -0.4 391,081 + +0.4 391,081 + -0.9 391,081 + -0.2 391,082 - -0.3 391,082 - -1.2 391,082 - +0.8 391,082 - -1.4 391,082 - -0.2 391,082 - -0.7 391,082 - -0.4 391,082 - +0.3 391,082 - -0.1 391,159 + Ac3H11_2162 0.15 -0.5 391,159 + Ac3H11_2162 0.15 -0.5 391,159 + Ac3H11_2162 0.15 -0.7 391,159 + Ac3H11_2162 0.15 -0.3 391,160 - Ac3H11_2162 0.15 -1.8 391,160 - Ac3H11_2162 0.15 -0.6 391,160 - Ac3H11_2162 0.15 +0.4 391,160 - Ac3H11_2162 0.15 -2.5 391,160 - Ac3H11_2162 0.15 -1.2 391,378 + Ac3H11_2162 0.52 +0.3 391,378 + Ac3H11_2162 0.52 +0.5 391,379 - Ac3H11_2162 0.52 -0.5 391,379 - Ac3H11_2162 0.52 -0.2 391,435 + Ac3H11_2162 0.61 +2.1 391,436 - Ac3H11_2162 0.61 -1.2 391,546 + Ac3H11_2162 0.80 -1.1 391,546 + Ac3H11_2162 0.80 +0.0 391,546 + Ac3H11_2162 0.80 -0.6 391,546 + Ac3H11_2162 0.80 -2.2 391,546 + Ac3H11_2162 0.80 -0.8 391,546 + Ac3H11_2162 0.80 -1.6 391,547 - Ac3H11_2162 0.80 -1.2 391,547 - Ac3H11_2162 0.80 -1.7 391,610 + +0.6 391,610 + -3.9 391,610 + -1.1 391,611 - -0.2 391,611 - +0.0 391,611 - -0.9 391,692 - -0.3 391,692 - -0.4
Or see this region's nucleotide sequence