Experiment: Phosphomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_202 and Ac3H11_203 are separated by 126 nucleotides Ac3H11_203 and Ac3H11_204 are separated by 150 nucleotides Ac3H11_204 and Ac3H11_205 overlap by 8 nucleotides Ac3H11_205 and Ac3H11_206 are separated by 99 nucleotides
Ac3H11_202 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 12,987 to 13,346
_202
Ac3H11_203 - Probable proline-rich protein, at 13,473 to 13,991
_203
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Ac3H11_205 - FIG152265: Sodium:solute symporter associated protein, at 16,234 to 16,533
_205
Ac3H11_206 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 16,633 to 19,023
_206
Position (kb) 14
15
16
17 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 13.642 kb on + strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 14.001 kb on - strand at 14.001 kb on - strand at 14.001 kb on - strand at 14.011 kb on + strand at 14.012 kb on - strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.024 kb on - strand at 14.024 kb on - strand at 14.063 kb on + strand at 14.091 kb on - strand at 14.106 kb on + strand at 14.106 kb on + strand at 14.107 kb on - strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.117 kb on - strand at 14.143 kb on + strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.590 kb on + strand, within Ac3H11_204 at 14.591 kb on - strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.921 kb on - strand, within Ac3H11_204 at 14.989 kb on + strand, within Ac3H11_204 at 14.989 kb on + strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 15.076 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.166 kb on + strand, within Ac3H11_204 at 15.166 kb on + strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.380 kb on - strand, within Ac3H11_204 at 15.460 kb on + strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.544 kb on + strand, within Ac3H11_204 at 15.544 kb on + strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.650 kb on + strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.697 kb on + strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.910 kb on + strand, within Ac3H11_204 at 15.911 kb on - strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.013 kb on - strand, within Ac3H11_204 at 16.040 kb on - strand at 16.040 kb on - strand at 16.040 kb on - strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.199 kb on - strand at 16.199 kb on - strand at 16.328 kb on + strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.383 kb on - strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.989 kb on + strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.172 kb on - strand, within Ac3H11_206 at 17.222 kb on + strand, within Ac3H11_206
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.06 mg/ml remove 13,642 + Ac3H11_203 0.33 +0.8 13,643 - Ac3H11_203 0.33 +0.9 13,643 - Ac3H11_203 0.33 +2.0 14,001 - -0.5 14,001 - +0.1 14,001 - +1.0 14,011 + +1.3 14,012 - -0.8 14,023 + -2.3 14,023 + +1.7 14,023 + -0.4 14,024 - +1.0 14,024 - -0.7 14,063 + +0.1 14,091 - +1.1 14,106 + +0.1 14,106 + +0.7 14,107 - +0.1 14,112 + -0.3 14,112 + +0.4 14,112 + +0.4 14,112 + +0.3 14,112 + -0.2 14,112 + +0.6 14,112 + +0.3 14,112 + +0.0 14,113 - +0.0 14,113 - +0.4 14,113 - -1.3 14,113 - +0.0 14,113 - -0.0 14,113 - -0.6 14,116 + +0.4 14,116 + -1.1 14,116 + -0.2 14,116 + +0.2 14,117 - -0.0 14,143 + -1.7 14,144 - -0.2 14,144 - -0.2 14,144 - -0.3 14,332 + +0.0 14,332 + +0.4 14,332 + -2.0 14,332 + +1.8 14,332 + +0.4 14,332 + -0.5 14,332 + -1.0 14,332 + -0.2 14,332 + +0.5 14,332 + +0.2 14,332 + -1.5 14,332 + +0.1 14,332 + +1.5 14,332 + -0.6 14,332 + +0.5 14,333 - +0.0 14,333 - +1.0 14,333 - -0.9 14,333 - -0.4 14,333 - -0.3 14,333 - -0.2 14,333 - +0.5 14,333 - -0.2 14,333 - -0.5 14,333 - -0.1 14,333 - -0.2 14,333 - +0.6 14,333 - -1.9 14,333 - -0.9 14,333 - -0.2 14,333 - +0.6 14,333 - +0.6 14,335 + +1.1 14,335 + -1.2 14,335 + -0.7 14,335 + +0.5 14,335 + -0.9 14,335 + -1.1 14,335 + +1.3 14,336 - +1.0 14,336 - -1.5 14,336 - -2.4 14,590 + Ac3H11_204 0.21 -1.0 14,591 - Ac3H11_204 0.21 +0.0 14,692 + Ac3H11_204 0.26 -0.5 14,692 + Ac3H11_204 0.26 -0.1 14,692 + Ac3H11_204 0.26 -0.9 14,693 - Ac3H11_204 0.26 +0.1 14,693 - Ac3H11_204 0.26 -0.3 14,693 - Ac3H11_204 0.26 +0.3 14,693 - Ac3H11_204 0.26 +0.6 14,693 - Ac3H11_204 0.26 -0.1 14,693 - Ac3H11_204 0.26 +0.2 14,921 - Ac3H11_204 0.37 +1.0 14,989 + Ac3H11_204 0.40 -0.8 14,989 + Ac3H11_204 0.40 -0.4 14,990 - Ac3H11_204 0.40 -0.9 14,990 - Ac3H11_204 0.40 +0.5 14,990 - Ac3H11_204 0.40 -0.1 15,076 + Ac3H11_204 0.44 -0.0 15,118 + Ac3H11_204 0.46 +0.3 15,118 + Ac3H11_204 0.46 +0.3 15,118 + Ac3H11_204 0.46 -0.2 15,118 + Ac3H11_204 0.46 +0.2 15,118 + Ac3H11_204 0.46 -0.2 15,119 - Ac3H11_204 0.47 -0.2 15,119 - Ac3H11_204 0.47 +1.2 15,119 - Ac3H11_204 0.47 +1.2 15,119 - Ac3H11_204 0.47 -0.6 15,166 + Ac3H11_204 0.49 +0.2 15,166 + Ac3H11_204 0.49 +0.7 15,167 - Ac3H11_204 0.49 -0.0 15,167 - Ac3H11_204 0.49 +0.9 15,167 - Ac3H11_204 0.49 +1.1 15,167 - Ac3H11_204 0.49 -0.4 15,379 + Ac3H11_204 0.59 +3.2 15,379 + Ac3H11_204 0.59 -0.4 15,379 + Ac3H11_204 0.59 -0.1 15,380 - Ac3H11_204 0.59 -1.8 15,460 + Ac3H11_204 0.63 -0.1 15,461 - Ac3H11_204 0.63 +0.8 15,461 - Ac3H11_204 0.63 -0.3 15,461 - Ac3H11_204 0.63 +1.4 15,461 - Ac3H11_204 0.63 -0.8 15,496 + Ac3H11_204 0.64 -0.3 15,496 + Ac3H11_204 0.64 +0.2 15,496 + Ac3H11_204 0.64 +0.1 15,496 + Ac3H11_204 0.64 +1.2 15,496 + Ac3H11_204 0.64 -0.8 15,496 + Ac3H11_204 0.64 +1.2 15,497 - Ac3H11_204 0.65 -1.1 15,497 - Ac3H11_204 0.65 -1.4 15,497 - Ac3H11_204 0.65 +0.3 15,497 - Ac3H11_204 0.65 +0.5 15,497 - Ac3H11_204 0.65 -0.2 15,497 - Ac3H11_204 0.65 +1.0 15,497 - Ac3H11_204 0.65 +2.3 15,544 + Ac3H11_204 0.67 -0.9 15,544 + Ac3H11_204 0.67 +0.0 15,545 - Ac3H11_204 0.67 +0.2 15,545 - Ac3H11_204 0.67 -1.4 15,545 - Ac3H11_204 0.67 -0.8 15,650 + Ac3H11_204 0.72 +0.2 15,651 - Ac3H11_204 0.72 +0.1 15,651 - Ac3H11_204 0.72 +0.2 15,679 + Ac3H11_204 0.73 -1.1 15,679 + Ac3H11_204 0.73 +0.5 15,679 + Ac3H11_204 0.73 -0.8 15,679 + Ac3H11_204 0.73 +0.5 15,679 + Ac3H11_204 0.73 +1.2 15,680 - Ac3H11_204 0.73 -0.3 15,680 - Ac3H11_204 0.73 -0.6 15,680 - Ac3H11_204 0.73 +0.7 15,697 + Ac3H11_204 0.74 -0.1 15,698 - Ac3H11_204 0.74 +0.7 15,698 - Ac3H11_204 0.74 +0.4 15,698 - Ac3H11_204 0.74 -0.5 15,698 - Ac3H11_204 0.74 -0.4 15,698 - Ac3H11_204 0.74 +0.9 15,787 + Ac3H11_204 0.78 +1.0 15,787 + Ac3H11_204 0.78 +0.2 15,787 + Ac3H11_204 0.78 +0.2 15,788 - Ac3H11_204 0.78 -0.5 15,788 - Ac3H11_204 0.78 +0.1 15,788 - Ac3H11_204 0.78 -1.9 15,788 - Ac3H11_204 0.78 -0.2 15,788 - Ac3H11_204 0.78 +0.5 15,788 - Ac3H11_204 0.78 +1.1 15,862 + Ac3H11_204 0.82 +0.4 15,862 + Ac3H11_204 0.82 -1.5 15,863 - Ac3H11_204 0.82 -0.8 15,863 - Ac3H11_204 0.82 -0.8 15,910 + Ac3H11_204 0.84 -1.7 15,911 - Ac3H11_204 0.84 +0.0 15,979 + Ac3H11_204 0.87 -0.4 15,979 + Ac3H11_204 0.87 +1.0 15,979 + +0.4 15,979 + Ac3H11_204 0.87 +1.1 15,979 + Ac3H11_204 0.87 -0.5 15,979 + Ac3H11_204 0.87 -1.1 15,979 + Ac3H11_204 0.87 -3.4 15,979 + Ac3H11_204 0.87 -0.5 15,979 + Ac3H11_204 0.87 -1.2 15,980 - Ac3H11_204 0.88 -2.8 15,980 - Ac3H11_204 0.88 +0.2 15,980 - Ac3H11_204 0.88 -0.1 15,980 - Ac3H11_204 0.88 -0.7 15,980 - Ac3H11_204 0.88 +0.4 15,980 - Ac3H11_204 0.88 -0.8 15,980 - Ac3H11_204 0.88 +0.4 16,009 + Ac3H11_204 0.89 -2.4 16,009 + Ac3H11_204 0.89 -1.2 16,009 + Ac3H11_204 0.89 +0.1 16,009 + Ac3H11_204 0.89 +1.1 16,009 + Ac3H11_204 0.89 +0.1 16,009 + Ac3H11_204 0.89 -0.4 16,010 - Ac3H11_204 0.89 +0.7 16,010 - Ac3H11_204 0.89 -0.8 16,010 - Ac3H11_204 0.89 -0.3 16,010 - Ac3H11_204 0.89 -0.5 16,010 - Ac3H11_204 0.89 -1.0 16,010 - Ac3H11_204 0.89 -0.6 16,010 - Ac3H11_204 0.89 +0.1 16,010 - Ac3H11_204 0.89 +0.2 16,010 - Ac3H11_204 0.89 +0.1 16,010 - Ac3H11_204 0.89 -0.9 16,012 + Ac3H11_204 0.89 -1.4 16,012 + Ac3H11_204 0.89 -1.0 16,012 + Ac3H11_204 0.89 +0.1 16,012 + Ac3H11_204 0.89 -0.9 16,013 - Ac3H11_204 0.89 -0.4 16,040 - -0.3 16,040 - -2.5 16,040 - -1.4 16,165 + +0.9 16,165 + +0.8 16,165 + -0.4 16,165 + +0.7 16,165 + -0.5 16,165 + +1.3 16,165 + +0.6 16,166 - +1.1 16,166 - +0.9 16,166 - +0.4 16,166 - +0.1 16,166 - -3.3 16,166 - -0.7 16,199 - -0.9 16,199 - +1.0 16,328 + Ac3H11_205 0.31 -0.0 16,329 - Ac3H11_205 0.32 +0.8 16,329 - Ac3H11_205 0.32 +0.5 16,383 - Ac3H11_205 0.50 -0.4 16,433 + Ac3H11_205 0.66 +1.1 16,433 + Ac3H11_205 0.66 +0.6 16,433 + Ac3H11_205 0.66 +0.3 16,434 - Ac3H11_205 0.67 +0.1 16,434 - Ac3H11_205 0.67 -0.7 16,434 - Ac3H11_205 0.67 +0.3 16,434 - Ac3H11_205 0.67 +0.5 16,434 - Ac3H11_205 0.67 -0.2 16,434 - Ac3H11_205 0.67 +0.0 16,763 + -0.4 16,763 + -1.7 16,763 + -0.9 16,763 + -0.0 16,763 + -0.6 16,763 + -0.2 16,763 + -0.6 16,764 - -0.7 16,764 - -0.3 16,764 - -3.5 16,989 + Ac3H11_206 0.15 -2.2 16,990 - Ac3H11_206 0.15 +0.0 16,990 - Ac3H11_206 0.15 -0.5 16,990 - Ac3H11_206 0.15 -2.8 16,990 - Ac3H11_206 0.15 -0.8 17,171 + Ac3H11_206 0.23 +0.3 17,171 + Ac3H11_206 0.23 -0.2 17,172 - Ac3H11_206 0.23 -0.6 17,222 + Ac3H11_206 0.25 -0.6
Or see this region's nucleotide sequence