Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28395

Experiment: L-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (C)
6,188,303	+				-2.0
6,188,304	-				-0.3
6,188,304	-				+0.2
6,188,304	-				-0.1
6,188,304	-				-0.8
6,188,304	-				-0.1
6,188,307	+				+0.3
6,188,307	+				+0.9
6,188,308	-				+0.9
6,188,308	-				-0.5
6,188,308	-				-1.1
6,188,393	+				-1.6
6,188,393	+				+1.9
6,188,410	+				-0.5
6,188,443	-				-0.7
6,188,443	-				+1.4
6,188,454	-				-1.1
6,188,454	-				+0.9
6,188,457	+				-1.5
6,188,457	+				-1.0
6,188,457	+				+0.3
6,188,457	+				-0.1
6,188,457	+				-0.3
6,188,457	+				+1.9
6,188,457	+				+0.0
6,188,458	-				-0.4
6,188,458	-				-0.1
6,188,458	-				+0.3
6,188,458	-				+2.4
6,188,458	-				+1.3
6,188,460	+				-0.5
6,188,469	+				+2.1
6,188,469	+				+1.1
6,188,469	+				+1.5
6,188,470	-				-0.8
6,188,472	+		AO353_28390	0.11	+1.9
6,188,473	-		AO353_28390	0.11	-1.3
6,188,473	-		AO353_28390	0.11	-0.7
6,188,570	-		AO353_28390	0.62	-0.4
6,188,570	-		AO353_28390	0.62	+1.5
6,188,599	+		AO353_28390	0.78	-1.5
6,188,600	-		AO353_28390	0.78	+0.4
6,188,600	-		AO353_28390	0.78	+0.7
6,188,835	+				-1.2
6,188,835	+				+1.7
6,188,835	+				+1.9
6,188,835	+				-1.3
6,188,836	-				-0.1
6,188,836	-				+0.6
6,188,927	+				-0.1
6,188,928	-				-0.0
6,188,928	-				-1.8
6,188,928	-				-1.4
6,188,928	-				-0.5
6,188,928	-				-1.0
6,188,943	+				+1.0
6,188,943	+				-1.5
6,188,943	+				-1.0
6,188,943	+				+0.1
6,188,944	-				+1.4
6,188,944	-				-0.4
6,188,944	-				-0.1
6,188,952	-				+1.9
6,188,952	-				+0.4
6,188,952	-				-0.2
6,188,952	-				-1.7
6,188,952	-				+0.7
6,188,983	+				+2.9
6,188,983	+				-1.0
6,188,983	+				-0.1
6,188,983	+				+0.4
6,188,983	+				+0.9
6,188,983	+				-0.1
6,188,983	+				-1.1
6,188,984	-				+3.9
6,188,984	-				-0.1
6,188,984	-				+1.3
6,188,984	-				+1.1
6,188,984	-				+0.9
6,188,987	+				+0.3
6,188,987	+				-1.1
6,188,987	+				+0.3
6,188,987	+				-0.1
6,188,988	-				-0.8
6,188,988	-				-0.1
6,188,988	-				+1.9
6,188,988	-				-0.0
6,189,010	+				+0.1
6,189,011	-				-2.0
6,189,011	-				-0.3
6,189,045	+				+0.9
6,189,046	-				+1.9
6,189,054	-				-1.6
6,189,054	-				-1.0
6,189,089	+				-0.1
6,189,089	+				+1.2
6,189,089	+				+0.1
6,189,119	-				+0.3
6,189,183	+				+0.4
6,189,231	+				+0.9
6,189,231	+				+1.1
6,189,231	+				+0.3
6,189,231	+				-1.0
6,189,231	+				+1.9
6,189,232	-				+1.4
6,189,232	-				-0.5
6,189,255	+				+0.0
6,189,255	+				-0.5
6,189,255	+				+0.0
6,189,255	+				+0.2
6,189,255	+				+0.1
6,189,255	+				-0.1
6,189,255	+				-2.4
6,189,256	-				+2.7
6,189,256	-				+1.4
6,189,256	-				+0.9
6,189,256	-				+0.5
6,189,256	-				-0.7
6,189,256	-				+0.5
6,189,256	-				+0.3
6,189,256	-				+2.4
6,189,256	-				+0.2
6,189,265	-				-2.0
6,189,320	+				-0.4
6,189,321	-				-1.5
6,189,321	-				+0.9
6,189,323	+				-1.0
6,189,323	+				-0.4
6,189,323	+				+1.5
6,189,323	+				-0.3
6,189,323	+				-0.3
6,189,323	+				+0.5
6,189,457	+				+0.9
6,189,471	-		AO353_28395	0.33	-0.5
6,189,578	+		AO353_28395	0.49	-0.1
6,189,578	+		AO353_28395	0.49	+0.5
6,189,579	-		AO353_28395	0.49	+0.8
6,189,626	+		AO353_28395	0.56	+2.4
6,189,626	+		AO353_28395	0.56	-1.1
6,189,626	+		AO353_28395	0.56	+1.9
6,189,626	+		AO353_28395	0.56	+1.4
6,189,627	-		AO353_28395	0.56	-0.8
6,189,627	-		AO353_28395	0.56	-1.0
6,189,627	-		AO353_28395	0.56	+0.0
6,189,723	+		AO353_28395	0.71	-0.3
6,189,723	+		AO353_28395	0.71	-1.1
6,189,723	+		AO353_28395	0.71	+0.9
6,189,723	+		AO353_28395	0.71	-1.8
6,189,724	-		AO353_28395	0.71	+1.3
6,189,740	+		AO353_28395	0.74	+1.3
6,189,740	+		AO353_28395	0.74	+1.4
6,189,863	-				+2.4
6,189,901	+				+1.3
6,189,902	-				-0.1
6,189,995	+		AO353_28400	0.14	-1.2
6,189,995	+		AO353_28400	0.14	-1.2
6,189,995	+		AO353_28400	0.14	-0.4
6,189,995	+		AO353_28400	0.14	-0.7
6,189,995	+		AO353_28400	0.14	+1.1
6,189,995	+		AO353_28400	0.14	-1.5
6,190,045	+		AO353_28400	0.21	+0.7
6,190,045	+		AO353_28400	0.21	+1.8
6,190,045	+				+0.3
6,190,046	-		AO353_28400	0.21	-1.2
6,190,046	-		AO353_28400	0.21	-0.1
6,190,349	+		AO353_28400	0.60	-1.7
6,190,350	-		AO353_28400	0.60	+0.8
6,190,396	+		AO353_28400	0.66	-0.7
6,190,397	-		AO353_28400	0.66	+0.6
6,190,420	-		AO353_28400	0.69	-1.6
6,190,420	-		AO353_28400	0.69	+1.1
6,190,420	-		AO353_28400	0.69	+0.8
6,190,429	+		AO353_28400	0.71	-1.6
6,190,430	-		AO353_28400	0.71	+0.5
6,190,430	-		AO353_28400	0.71	+0.7
6,190,430	-		AO353_28400	0.71	-0.7
6,190,460	+		AO353_28400	0.75	+1.4
6,190,461	-		AO353_28400	0.75	+0.1
6,190,514	-		AO353_28400	0.82	+0.1
6,190,557	-		AO353_28400	0.87	-0.5
6,190,743	+				+0.3
6,190,744	-				-0.6
6,190,744	-				-1.3
6,190,744	-				-0.1
6,190,761	+				+1.3
6,190,761	+				-0.8
6,190,762	-				-1.8
6,190,809	+				-0.1
6,190,810	-				-0.1
6,190,816	+				-0.7
6,190,816	+				-1.0
6,190,817	-				-0.2
6,190,817	-				+0.4
6,190,817	-				-1.1
6,190,817	-				-1.0
6,190,850	+		AO353_28405	0.14	+0.4
6,190,850	+		AO353_28405	0.14	+0.0
6,190,850	+		AO353_28405	0.14	-0.1
6,190,850	+		AO353_28405	0.14	-0.3
6,190,850	+		AO353_28405	0.14	+1.3
6,190,851	-		AO353_28405	0.14	+1.1
6,190,851	-		AO353_28405	0.14	-0.5
6,190,851	-		AO353_28405	0.14	-0.1
6,190,851	-		AO353_28405	0.14	+1.0
6,190,851	-		AO353_28405	0.14	-0.6
6,190,872	+		AO353_28405	0.18	-0.3
6,190,888	+		AO353_28405	0.21	-0.3
6,190,889	-		AO353_28405	0.21	+1.0