Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28015

Experiment: L-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (C)
6,107,649	+				+1.3
6,107,742	-				-0.7
6,107,808	+				-1.1
6,107,847	+				+1.8
6,107,847	+				-2.9
6,107,847	+				-1.2
6,107,850	+				-1.3
6,107,850	+				+0.7
6,107,850	+				+1.1
6,107,850	+				-0.2
6,107,851	-				-0.5
6,107,851	-				+1.2
6,107,851	-				+0.5
6,107,851	-				+0.1
6,107,914	+				+0.7
6,107,915	-				+0.2
6,107,915	-				-0.2
6,108,085	-		AO353_28010	0.28	+1.8
6,108,129	-		AO353_28010	0.34	+0.1
6,108,129	-		AO353_28010	0.34	-0.6
6,108,137	+		AO353_28010	0.35	-0.3
6,108,137	+		AO353_28010	0.35	-0.8
6,108,137	+		AO353_28010	0.35	-0.2
6,108,137	+		AO353_28010	0.35	-0.9
6,108,137	+		AO353_28010	0.35	+0.1
6,108,137	+		AO353_28010	0.35	-0.1
6,108,138	-		AO353_28010	0.35	+1.4
6,108,138	-		AO353_28010	0.35	-0.2
6,108,138	-		AO353_28010	0.35	-0.8
6,108,138	-		AO353_28010	0.35	-0.4
6,108,138	-		AO353_28010	0.35	+0.7
6,108,138	-		AO353_28010	0.35	-1.7
6,108,138	-		AO353_28010	0.35	-0.6
6,108,138	-		AO353_28010	0.35	-0.5
6,108,138	-		AO353_28010	0.35	-0.5
6,108,138	-		AO353_28010	0.35	+1.1
6,108,138	-		AO353_28010	0.35	-1.0
6,108,138	-		AO353_28010	0.35	+0.6
6,108,164	+		AO353_28010	0.39	-0.5
6,108,164	+		AO353_28010	0.39	+0.2
6,108,164	+		AO353_28010	0.39	+0.5
6,108,164	+		AO353_28010	0.39	-0.4
6,108,164	+		AO353_28010	0.39	-0.3
6,108,165	-		AO353_28010	0.39	-0.5
6,108,165	-		AO353_28010	0.39	-1.2
6,108,165	-		AO353_28010	0.39	+0.8
6,108,170	+		AO353_28010	0.40	-0.5
6,108,171	-		AO353_28010	0.40	+1.1
6,108,171	-		AO353_28010	0.40	+0.3
6,108,188	+		AO353_28010	0.42	+0.8
6,108,188	+		AO353_28010	0.42	-1.2
6,108,188	+		AO353_28010	0.42	+0.8
6,108,188	+		AO353_28010	0.42	-1.0
6,108,188	+		AO353_28010	0.42	+1.5
6,108,188	+		AO353_28010	0.42	-0.2
6,108,189	-		AO353_28010	0.42	-0.6
6,108,189	-		AO353_28010	0.42	-0.1
6,108,189	-		AO353_28010	0.42	-1.9
6,108,189	-		AO353_28010	0.42	+0.1
6,108,189	-		AO353_28010	0.42	+0.4
6,108,191	-		AO353_28010	0.42	-0.2
6,108,233	+		AO353_28010	0.48	+1.5
6,108,234	-				+0.8
6,108,234	-		AO353_28010	0.48	-0.5
6,108,272	+		AO353_28010	0.54	-0.1
6,108,272	+		AO353_28010	0.54	-0.6
6,108,273	-		AO353_28010	0.54	-1.0
6,108,273	-		AO353_28010	0.54	+0.4
6,108,273	-		AO353_28010	0.54	-0.4
6,108,273	-		AO353_28010	0.54	-0.2
6,108,320	+		AO353_28010	0.60	-1.2
6,108,320	+		AO353_28010	0.60	-0.5
6,108,320	+		AO353_28010	0.60	-1.0
6,108,320	+		AO353_28010	0.60	-0.4
6,108,320	+		AO353_28010	0.60	+1.0
6,108,321	-		AO353_28010	0.61	-0.3
6,108,321	-		AO353_28010	0.61	-0.1
6,108,321	-		AO353_28010	0.61	-0.1
6,108,321	-		AO353_28010	0.61	-1.1
6,108,321	-		AO353_28010	0.61	-0.4
6,108,321	-		AO353_28010	0.61	+1.8
6,108,321	-		AO353_28010	0.61	+0.5
6,108,321	-		AO353_28010	0.61	+1.8
6,108,542	+				+1.8
6,108,542	+				+1.6
6,108,542	+				+1.5
6,108,543	-				+0.2
6,108,543	-				-0.3
6,108,543	-				-0.2
6,108,543	-				+1.8
6,108,602	+				+1.2
6,108,603	-				+0.5
6,108,621	+				-0.9
6,108,627	+				+0.4
6,108,638	+				+0.2
6,108,638	+				+0.5
6,108,638	+				+0.8
6,108,638	+				-0.7
6,108,639	-				-0.5
6,108,639	-				-0.5
6,108,651	+				-0.5
6,108,652	-				-0.5
6,108,737	-		AO353_28015	0.30	-1.6
6,108,780	-		AO353_28015	0.41	+0.2
6,108,831	+		AO353_28015	0.53	-0.9
6,108,832	-		AO353_28015	0.54	+0.6
6,108,925	+		AO353_28015	0.77	-1.0
6,109,015	+				-0.0
6,109,015	+				-1.2
6,109,058	+				-1.7
6,109,059	-				+2.4
6,109,074	-				+0.8
6,109,096	+				-0.2
6,109,096	+				+0.8
6,109,096	+				-0.7
6,109,097	-				+0.2
6,109,097	-				+0.2
6,109,100	+				-1.4
6,109,100	+				+1.2
6,109,101	-				+1.1
6,109,101	-				+0.2
6,109,101	-				+0.5
6,109,104	+				+0.6
6,109,105	-				-0.0
6,109,115	-				+1.8
6,109,115	-				-1.2
6,109,163	-		AO353_28020	0.18	-0.2
6,109,163	-		AO353_28020	0.18	-0.2
6,109,220	-		AO353_28020	0.32	+1.0
6,109,304	+		AO353_28020	0.53	-0.2
6,109,304	+		AO353_28020	0.53	-0.1
6,109,304	+		AO353_28020	0.53	+0.1
6,109,304	+		AO353_28020	0.53	+1.1
6,109,305	-		AO353_28020	0.53	-0.0
6,109,305	-		AO353_28020	0.53	-1.1
6,109,305	-		AO353_28020	0.53	-1.0
6,109,323	+		AO353_28020	0.58	-1.8
6,109,324	-		AO353_28020	0.58	-0.5
6,109,324	-		AO353_28020	0.58	-0.4
6,109,333	+		AO353_28020	0.60	+0.1
6,109,334	-		AO353_28020	0.60	-0.2
6,109,334	-		AO353_28020	0.60	+1.0
6,109,334	-		AO353_28020	0.60	-1.5
6,109,334	-		AO353_28020	0.60	-1.2
6,109,376	+		AO353_28020	0.71	-0.5
6,109,376	+		AO353_28020	0.71	-0.1
6,109,376	+		AO353_28020	0.71	-0.7
6,109,402	+		AO353_28020	0.77	-1.2
6,109,402	+		AO353_28020	0.77	+0.0
6,109,402	+		AO353_28020	0.77	+0.8
6,109,402	+		AO353_28020	0.77	+0.2
6,109,403	-		AO353_28020	0.78	+0.2
6,109,403	-		AO353_28020	0.78	-0.0
6,109,403	-		AO353_28020	0.78	-0.1
6,109,403	-		AO353_28020	0.78	-0.2
6,109,403	-		AO353_28020	0.78	-0.8
6,109,403	-		AO353_28020	0.78	-0.1
6,109,403	-		AO353_28020	0.78	+0.8
6,109,403	-		AO353_28020	0.78	-0.6
6,109,478	+				+0.2
6,109,478	+				+1.8
6,109,478	+				+0.8
6,109,478	+				-0.3
6,109,478	+				+1.2
6,109,478	+				-1.8
6,109,490	+				-1.0
6,109,502	+				-0.9
6,109,502	+				-2.2
6,109,502	+				-0.7
6,109,502	+				-0.2
6,109,502	+				-1.9
6,109,503	-				-1.5
6,109,503	-				+0.5
6,109,503	-				+0.3
6,109,503	-				+0.2
6,109,526	+				-0.9
6,109,526	+				+0.5
6,109,554	+				+2.1
6,109,599	-				-0.5
6,109,667	+				+1.3
6,109,667	+				-0.6
6,109,668	-				+0.9
6,109,677	+				-0.0
6,109,678	-				-1.2
6,109,700	+				-1.2
6,109,700	+				+1.2
6,109,727	+				-1.3
6,109,805	+				+0.2
6,109,811	+				+1.1
6,109,811	+				-0.5
6,109,811	+				+0.6
6,109,811	+				-1.8
6,109,812	-				+2.8
6,109,812	-				-0.8
6,109,812	-				-0.2
6,109,812	-				-1.0
6,109,812	-				-1.0
6,109,842	+		AO353_28025	0.11	+0.2
6,109,842	+		AO353_28025	0.11	-0.2
6,109,842	+		AO353_28025	0.11	-1.8
6,109,842	+		AO353_28025	0.11	+0.7
6,109,843	-		AO353_28025	0.11	-0.8
6,109,843	-		AO353_28025	0.11	+2.4
6,109,843	-		AO353_28025	0.11	-0.4
6,109,859	+		AO353_28025	0.12	-0.2
6,109,860	-		AO353_28025	0.12	-1.2
6,109,955	-		AO353_28025	0.22	+0.2
6,109,977	+		AO353_28025	0.24	+1.1