Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27005

Experiment: L-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (C)
5,917,540	+		AO353_26995	0.68	-1.0
5,917,540	+		AO353_26995	0.68	-0.2
5,917,541	-		AO353_26995	0.68	+0.4
5,917,541	-		AO353_26995	0.68	+0.2
5,917,592	+		AO353_26995	0.82	+1.8
5,917,593	-		AO353_26995	0.82	+1.5
5,917,593	-		AO353_26995	0.82	+0.4
5,917,636	-				+0.2
5,917,655	+				+0.8
5,917,655	+				-0.0
5,917,655	+				-1.4
5,917,655	+				-0.8
5,917,655	+				-0.6
5,917,656	-				+0.6
5,917,656	-				+0.1
5,917,656	-				+0.8
5,917,658	+				+0.6
5,917,658	+				-0.1
5,917,658	+				-0.4
5,917,658	+				+1.3
5,917,658	+				-0.8
5,917,658	+				-0.6
5,917,658	+				+0.8
5,917,658	+				+1.8
5,917,659	-				-0.8
5,917,659	-				+0.8
5,917,659	-				-0.7
5,917,659	-				+0.9
5,917,669	+				-0.2
5,917,692	+				-1.0
5,917,692	+				-1.2
5,917,692	+				+1.3
5,917,693	-				-1.7
5,917,721	-				+0.6
5,917,729	+				-1.5
5,917,741	+				+0.2
5,917,742	-				+1.3
5,917,751	+				-1.2
5,917,751	+				-1.0
5,917,751	+				-0.8
5,917,752	-				+0.2
5,917,781	+				+0.3
5,917,781	+				-0.6
5,917,784	+				-0.9
5,917,784	+				-3.2
5,917,785	-				+0.6
5,917,999	+		AO353_27000	0.44	-0.8
5,918,000	-		AO353_27000	0.44	-1.8
5,918,000	-		AO353_27000	0.44	+0.8
5,918,000	-		AO353_27000	0.44	-0.1
5,918,000	-		AO353_27000	0.44	-0.2
5,918,198	+				-0.8
5,918,198	+				-0.0
5,918,199	-				-1.8
5,918,219	+				-2.1
5,918,220	-				-0.1
5,918,223	+				-0.2
5,918,223	+				-2.8
5,918,223	+				+0.4
5,918,223	+				+1.0
5,918,223	+				+2.8
5,918,223	+				+1.4
5,918,223	+				-0.2
5,918,223	+				-1.2
5,918,223	+				-0.2
5,918,223	+				+0.2
5,918,223	+				+0.4
5,918,223	+				+0.5
5,918,224	-				-0.6
5,918,224	-				-1.2
5,918,224	-				-0.7
5,918,224	-				-1.6
5,918,224	-				+0.2
5,918,224	-				+0.6
5,918,224	-				+2.2
5,918,224	-				-1.2
5,918,224	-				-0.6
5,918,224	-				-0.8
5,918,235	+				+1.8
5,918,235	+				-0.1
5,918,235	+				+1.8
5,918,236	-				-0.4
5,918,236	-				+0.8
5,918,348	+				-1.0
5,918,349	-				+1.2
5,918,349	-				+0.4
5,918,349	-				+0.4
5,918,350	+				+1.8
5,918,350	+				+0.6
5,918,350	+				-0.8
5,918,350	+				-0.6
5,918,350	+				+0.6
5,918,350	+				-0.8
5,918,350	+				-1.7
5,918,350	+				-0.4
5,918,350	+				+0.5
5,918,350	+				-1.9
5,918,350	+				-0.4
5,918,350	+				+0.4
5,918,351	-				-1.8
5,918,351	-				-0.8
5,918,351	-				+0.2
5,918,351	-				-0.2
5,918,351	-				-0.2
5,918,351	-				-0.2
5,918,370	+				+1.0
5,918,431	+				-0.9
5,918,431	+				-0.7
5,918,432	-				+1.8
5,918,432	-				-0.2
5,918,516	+				-0.4
5,918,516	+				-0.0
5,918,516	+				-1.4
5,918,516	+				+0.8
5,918,517	-				+0.8
5,918,517	-				+0.5
5,918,517	-				+1.3
5,918,517	-				+0.2
5,918,518	+				-1.0
5,918,518	+				-0.6
5,918,519	-				+0.2
5,918,519	-				+0.7
5,918,519	-				-1.0
5,918,519	-				-1.4
5,918,519	-				+0.6
5,918,519	-				+0.2
5,918,672	+		AO353_27005	0.19	+0.4
5,918,672	+		AO353_27005	0.19	-1.6
5,918,672	+		AO353_27005	0.19	+0.4
5,918,672	+		AO353_27005	0.19	+1.0
5,918,672	+		AO353_27005	0.19	+0.4
5,918,673	-		AO353_27005	0.19	+0.1
5,918,673	-		AO353_27005	0.19	-0.4
5,918,673	-		AO353_27005	0.19	+5.6
5,918,739	-		AO353_27005	0.28	-0.5
5,918,739	-		AO353_27005	0.28	+1.1
5,918,744	+		AO353_27005	0.29	-0.4
5,918,744	+		AO353_27005	0.29	-1.2
5,918,744	+		AO353_27005	0.29	+1.4
5,918,744	+		AO353_27005	0.29	-1.4
5,918,744	+		AO353_27005	0.29	+0.2
5,918,795	+		AO353_27005	0.36	+0.2
5,918,795	+		AO353_27005	0.36	-0.8
5,918,795	+		AO353_27005	0.36	+0.0
5,918,796	-		AO353_27005	0.36	+0.8
5,918,934	-		AO353_27005	0.55	+1.2
5,918,934	-		AO353_27005	0.55	+0.8
5,918,934	-		AO353_27005	0.55	-0.5
5,918,948	+		AO353_27005	0.57	+0.6
5,918,948	+		AO353_27005	0.57	+0.4
5,918,948	+		AO353_27005	0.57	-1.4
5,918,948	+		AO353_27005	0.57	+0.1
5,918,948	+		AO353_27005	0.57	-0.6
5,918,948	+		AO353_27005	0.57	-0.6
5,918,948	+		AO353_27005	0.57	+0.2
5,918,948	+		AO353_27005	0.57	-1.0
5,918,949	-		AO353_27005	0.57	-0.2
5,918,949	-		AO353_27005	0.57	+1.2
5,918,949	-		AO353_27005	0.57	+0.6
5,919,220	+				-0.8
5,919,251	+				-0.2
5,919,400	+		AO353_27010	0.23	-1.2
5,919,400	+		AO353_27010	0.23	+0.8
5,919,400	+		AO353_27010	0.23	-1.7
5,919,401	-		AO353_27010	0.23	+0.3
5,919,455	-		AO353_27010	0.31	-1.3
5,919,455	-		AO353_27010	0.31	+1.0
5,919,511	-		AO353_27010	0.40	+0.4
5,919,511	-		AO353_27010	0.40	-0.1
5,919,694	-		AO353_27010	0.67	-0.7
5,919,981	+				-0.6
5,919,987	+				+1.2
5,919,987	+				-1.3
5,919,987	+				+0.8
5,919,988	-				-0.8
5,919,988	-				+0.2
5,919,988	-				-0.5
5,919,988	-				-1.0
5,919,997	-				-0.0
5,919,997	-				+1.0
5,919,997	-				-1.2
5,920,097	+				-0.5
5,920,098	-				-0.9
5,920,098	-				-1.0
5,920,121	+		AO353_27015	0.10	-0.9
5,920,121	+		AO353_27015	0.10	-0.4
5,920,121	+		AO353_27015	0.10	+0.4
5,920,121	+		AO353_27015	0.10	-0.0
5,920,122	-		AO353_27015	0.10	-0.4
5,920,122	-		AO353_27015	0.10	-1.9
5,920,122	-		AO353_27015	0.10	-1.4
5,920,122	-		AO353_27015	0.10	-1.0