Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26780 and AO353_26785 are separated by 536 nucleotides AO353_26785 and AO353_26790 are separated by 176 nucleotides
AO353_26780: AO353_26780 - DNA topoisomerase III, at 5,865,542 to 5,867,485
_26780
AO353_26785: AO353_26785 - hypothetical protein, at 5,868,022 to 5,868,387
_26785
AO353_26790: AO353_26790 - Glutaminase (EC 3.5.1.2) (from data) , at 5,868,564 to 5,869,472
_26790
Position (kb)
5868
5869 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5867.441 kb on - strand at 5867.441 kb on - strand at 5867.441 kb on - strand at 5867.483 kb on + strand at 5867.483 kb on + strand at 5867.484 kb on - strand at 5867.484 kb on - strand at 5867.484 kb on - strand at 5867.686 kb on + strand at 5867.686 kb on + strand at 5867.686 kb on + strand at 5867.686 kb on + strand at 5867.687 kb on - strand at 5867.718 kb on - strand at 5867.740 kb on - strand at 5867.827 kb on + strand at 5867.894 kb on + strand at 5867.895 kb on - strand at 5867.895 kb on - strand at 5867.895 kb on - strand at 5867.895 kb on - strand at 5867.947 kb on + strand at 5867.947 kb on + strand at 5867.947 kb on + strand at 5867.947 kb on + strand at 5867.947 kb on + strand at 5867.947 kb on + strand at 5867.948 kb on - strand at 5867.948 kb on - strand at 5867.951 kb on - strand at 5867.951 kb on - strand at 5867.984 kb on - strand at 5868.003 kb on + strand at 5868.004 kb on - strand at 5868.004 kb on - strand at 5868.004 kb on - strand at 5868.004 kb on - strand at 5868.004 kb on - strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.007 kb on + strand at 5868.008 kb on - strand at 5868.008 kb on - strand at 5868.008 kb on - strand at 5868.008 kb on - strand at 5868.127 kb on + strand, within AO353_26785 at 5868.127 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.204 kb on + strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.205 kb on - strand, within AO353_26785 at 5868.294 kb on + strand, within AO353_26785 at 5868.385 kb on + strand at 5868.385 kb on + strand at 5868.441 kb on + strand at 5868.441 kb on + strand at 5868.533 kb on + strand at 5868.533 kb on + strand at 5868.533 kb on + strand at 5868.533 kb on + strand at 5868.533 kb on + strand at 5868.534 kb on - strand at 5868.565 kb on + strand at 5868.565 kb on + strand at 5868.565 kb on + strand at 5868.565 kb on + strand at 5868.566 kb on - strand at 5868.566 kb on - strand at 5868.566 kb on - strand at 5868.566 kb on - strand at 5868.566 kb on - strand at 5868.706 kb on - strand, within AO353_26790 at 5868.706 kb on - strand, within AO353_26790 at 5868.760 kb on + strand, within AO353_26790 at 5868.760 kb on + strand, within AO353_26790 at 5868.761 kb on - strand, within AO353_26790 at 5868.916 kb on + strand, within AO353_26790 at 5868.916 kb on + strand, within AO353_26790 at 5868.917 kb on - strand, within AO353_26790 at 5868.917 kb on - strand, within AO353_26790 at 5868.917 kb on - strand, within AO353_26790 at 5868.917 kb on - strand, within AO353_26790 at 5868.936 kb on + strand, within AO353_26790 at 5868.937 kb on - strand, within AO353_26790 at 5868.937 kb on - strand, within AO353_26790 at 5868.937 kb on - strand, within AO353_26790 at 5868.974 kb on - strand, within AO353_26790 at 5868.974 kb on - strand, within AO353_26790 at 5868.974 kb on - strand, within AO353_26790 at 5869.289 kb on + strand, within AO353_26790 at 5869.289 kb on + strand, within AO353_26790 at 5869.290 kb on - strand, within AO353_26790 at 5869.290 kb on - strand, within AO353_26790 at 5869.330 kb on + strand, within AO353_26790 at 5869.351 kb on + strand, within AO353_26790 at 5869.351 kb on + strand, within AO353_26790 at 5869.352 kb on - strand, within AO353_26790
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 5,867,441 - -1.0 5,867,441 - -0.4 5,867,441 - -1.4 5,867,483 + -1.1 5,867,483 + +1.3 5,867,484 - +0.2 5,867,484 - +0.7 5,867,484 - -0.4 5,867,686 + +0.7 5,867,686 + -0.6 5,867,686 + -1.6 5,867,686 + -1.1 5,867,687 - -0.7 5,867,718 - -1.0 5,867,740 - +0.4 5,867,827 + -1.5 5,867,894 + +1.1 5,867,895 - +0.2 5,867,895 - -1.7 5,867,895 - +0.3 5,867,895 - +0.2 5,867,947 + -0.4 5,867,947 + +0.2 5,867,947 + -0.8 5,867,947 + +0.7 5,867,947 + -0.7 5,867,947 + +2.1 5,867,948 - +0.9 5,867,948 - +0.3 5,867,951 - +0.6 5,867,951 - +0.8 5,867,984 - -0.6 5,868,003 + +0.4 5,868,004 - +0.3 5,868,004 - -1.0 5,868,004 - -0.6 5,868,004 - +0.9 5,868,004 - -2.2 5,868,007 + +0.4 5,868,007 + -1.1 5,868,007 + +0.2 5,868,007 + +1.2 5,868,007 + -1.4 5,868,007 + +0.7 5,868,007 + -0.0 5,868,007 + +0.2 5,868,007 + -1.3 5,868,007 + +1.4 5,868,008 - -0.3 5,868,008 - +1.2 5,868,008 - -0.3 5,868,008 - -0.1 5,868,127 + AO353_26785 0.29 -1.4 5,868,127 + AO353_26785 0.29 -2.0 5,868,204 + AO353_26785 0.50 -0.6 5,868,204 + AO353_26785 0.50 -0.7 5,868,204 + AO353_26785 0.50 -2.1 5,868,204 + AO353_26785 0.50 -0.8 5,868,204 + AO353_26785 0.50 -1.7 5,868,204 + AO353_26785 0.50 -1.1 5,868,204 + AO353_26785 0.50 +1.7 5,868,205 - AO353_26785 0.50 -0.5 5,868,205 - AO353_26785 0.50 -0.8 5,868,205 - AO353_26785 0.50 -1.7 5,868,205 - AO353_26785 0.50 -1.1 5,868,205 - AO353_26785 0.50 +0.5 5,868,205 - AO353_26785 0.50 +0.5 5,868,205 - AO353_26785 0.50 -1.5 5,868,205 - AO353_26785 0.50 -1.7 5,868,294 + AO353_26785 0.74 -0.8 5,868,385 + +0.7 5,868,385 + +1.1 5,868,441 + -0.6 5,868,441 + +2.3 5,868,533 + +1.0 5,868,533 + -1.0 5,868,533 + +0.9 5,868,533 + +1.3 5,868,533 + -1.7 5,868,534 - -1.0 5,868,565 + -1.2 5,868,565 + -1.4 5,868,565 + -1.4 5,868,565 + +1.4 5,868,566 - +0.7 5,868,566 - -0.1 5,868,566 - +0.7 5,868,566 - +0.0 5,868,566 - -0.3 5,868,706 - AO353_26790 0.16 -1.4 5,868,706 - AO353_26790 0.16 -0.4 5,868,760 + AO353_26790 0.22 -0.3 5,868,760 + AO353_26790 0.22 -0.1 5,868,761 - AO353_26790 0.22 -0.6 5,868,916 + AO353_26790 0.39 +0.1 5,868,916 + AO353_26790 0.39 -0.6 5,868,917 - AO353_26790 0.39 -2.3 5,868,917 - AO353_26790 0.39 -1.8 5,868,917 - AO353_26790 0.39 -1.4 5,868,917 - AO353_26790 0.39 -1.6 5,868,936 + AO353_26790 0.41 -1.8 5,868,937 - AO353_26790 0.41 +1.7 5,868,937 - AO353_26790 0.41 -0.3 5,868,937 - AO353_26790 0.41 -0.0 5,868,974 - AO353_26790 0.45 +0.7 5,868,974 - AO353_26790 0.45 +0.7 5,868,974 - AO353_26790 0.45 +0.1 5,869,289 + AO353_26790 0.80 -2.3 5,869,289 + AO353_26790 0.80 +0.0 5,869,290 - AO353_26790 0.80 -0.8 5,869,290 - AO353_26790 0.80 -0.3 5,869,330 + AO353_26790 0.84 -1.3 5,869,351 + AO353_26790 0.87 -1.6 5,869,351 + AO353_26790 0.87 -0.6 5,869,352 - AO353_26790 0.87 -0.3
Or see this region's nucleotide sequence