Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26615 and AO353_26620 are separated by 38 nucleotides AO353_26620 and AO353_26625 are separated by 103 nucleotides
AO353_26615: AO353_26615 - pyridine nucleotide-disulfide oxidoreductase, at 5,828,080 to 5,829,324
_26615
AO353_26620: AO353_26620 - ArsR family transcriptional regulator, at 5,829,363 to 5,829,698
_26620
AO353_26625: AO353_26625 - MBL fold metallo-hydrolase, at 5,829,802 to 5,830,665
_26625
Position (kb)
5829
5830 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5828.397 kb on + strand, within AO353_26615 at 5828.398 kb on - strand, within AO353_26615 at 5828.530 kb on + strand, within AO353_26615 at 5828.663 kb on + strand, within AO353_26615 at 5828.663 kb on + strand, within AO353_26615 at 5828.664 kb on - strand, within AO353_26615 at 5828.664 kb on - strand, within AO353_26615 at 5828.675 kb on + strand, within AO353_26615 at 5828.675 kb on + strand, within AO353_26615 at 5828.675 kb on + strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.676 kb on - strand, within AO353_26615 at 5828.755 kb on + strand, within AO353_26615 at 5828.755 kb on + strand, within AO353_26615 at 5828.756 kb on - strand, within AO353_26615 at 5828.756 kb on - strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.792 kb on + strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.793 kb on - strand, within AO353_26615 at 5828.891 kb on + strand, within AO353_26615 at 5828.891 kb on + strand, within AO353_26615 at 5828.892 kb on - strand, within AO353_26615 at 5828.892 kb on - strand, within AO353_26615 at 5828.912 kb on + strand, within AO353_26615 at 5828.912 kb on + strand, within AO353_26615 at 5828.912 kb on + strand, within AO353_26615 at 5828.912 kb on + strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5828.913 kb on - strand, within AO353_26615 at 5829.121 kb on + strand, within AO353_26615 at 5829.122 kb on - strand, within AO353_26615 at 5829.122 kb on - strand, within AO353_26615 at 5829.176 kb on + strand, within AO353_26615 at 5829.176 kb on + strand, within AO353_26615 at 5829.177 kb on - strand, within AO353_26615 at 5829.179 kb on + strand, within AO353_26615 at 5829.179 kb on + strand, within AO353_26615 at 5829.179 kb on + strand, within AO353_26615 at 5829.179 kb on + strand, within AO353_26615 at 5829.179 kb on + strand, within AO353_26615 at 5829.180 kb on - strand, within AO353_26615 at 5829.180 kb on - strand, within AO353_26615 at 5829.180 kb on - strand, within AO353_26615 at 5829.180 kb on - strand, within AO353_26615 at 5829.275 kb on - strand at 5829.324 kb on + strand at 5829.324 kb on + strand at 5829.324 kb on + strand at 5829.324 kb on + strand at 5829.325 kb on - strand at 5829.325 kb on - strand at 5829.325 kb on - strand at 5829.325 kb on - strand at 5829.325 kb on - strand at 5829.325 kb on - strand at 5829.329 kb on + strand at 5829.329 kb on + strand at 5829.329 kb on + strand at 5829.330 kb on - strand at 5829.330 kb on - strand at 5829.338 kb on + strand at 5829.338 kb on + strand at 5829.339 kb on - strand at 5829.339 kb on - strand at 5829.379 kb on - strand at 5829.379 kb on - strand at 5829.394 kb on + strand at 5829.395 kb on - strand at 5829.395 kb on - strand at 5829.448 kb on + strand, within AO353_26620 at 5829.449 kb on - strand, within AO353_26620 at 5829.458 kb on - strand, within AO353_26620 at 5829.458 kb on - strand, within AO353_26620 at 5829.618 kb on + strand, within AO353_26620 at 5829.684 kb on + strand at 5829.706 kb on + strand at 5829.706 kb on + strand at 5829.706 kb on + strand at 5829.707 kb on - strand at 5829.707 kb on - strand at 5829.724 kb on - strand at 5829.737 kb on + strand at 5829.767 kb on + strand at 5829.767 kb on + strand at 5829.768 kb on - strand at 5829.768 kb on - strand at 5829.768 kb on - strand at 5829.768 kb on - strand at 5829.768 kb on - strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.847 kb on + strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.848 kb on - strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.853 kb on + strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.854 kb on - strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.862 kb on + strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.863 kb on - strand at 5829.910 kb on + strand, within AO353_26625 at 5830.042 kb on + strand, within AO353_26625 at 5830.255 kb on + strand, within AO353_26625 at 5830.255 kb on + strand, within AO353_26625 at 5830.256 kb on - strand, within AO353_26625 at 5830.356 kb on - strand, within AO353_26625 at 5830.356 kb on - strand, within AO353_26625 at 5830.356 kb on - strand, within AO353_26625 at 5830.356 kb on - strand, within AO353_26625 at 5830.356 kb on - strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.405 kb on + strand, within AO353_26625 at 5830.483 kb on - strand, within AO353_26625 at 5830.483 kb on - strand, within AO353_26625 at 5830.483 kb on - strand, within AO353_26625 at 5830.568 kb on + strand, within AO353_26625 at 5830.692 kb on + strand at 5830.692 kb on + strand at 5830.692 kb on + strand at 5830.692 kb on + strand at 5830.693 kb on - strand at 5830.693 kb on - strand at 5830.693 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 5,828,397 + AO353_26615 0.25 -0.6 5,828,398 - AO353_26615 0.26 -0.3 5,828,530 + AO353_26615 0.36 +0.0 5,828,663 + AO353_26615 0.47 -1.1 5,828,663 + AO353_26615 0.47 +0.2 5,828,664 - AO353_26615 0.47 +1.3 5,828,664 - AO353_26615 0.47 -0.4 5,828,675 + AO353_26615 0.48 -0.6 5,828,675 + AO353_26615 0.48 +0.2 5,828,675 + AO353_26615 0.48 +0.0 5,828,676 - AO353_26615 0.48 -1.3 5,828,676 - AO353_26615 0.48 -1.8 5,828,676 - AO353_26615 0.48 +0.2 5,828,676 - AO353_26615 0.48 +1.2 5,828,676 - AO353_26615 0.48 -1.4 5,828,676 - AO353_26615 0.48 -1.1 5,828,755 + AO353_26615 0.54 +1.3 5,828,755 + AO353_26615 0.54 -0.1 5,828,756 - AO353_26615 0.54 -0.1 5,828,756 - AO353_26615 0.54 +1.3 5,828,792 + AO353_26615 0.57 +0.3 5,828,792 + AO353_26615 0.57 +0.3 5,828,792 + AO353_26615 0.57 +0.4 5,828,792 + AO353_26615 0.57 -1.7 5,828,792 + AO353_26615 0.57 +1.2 5,828,792 + AO353_26615 0.57 -0.4 5,828,793 - AO353_26615 0.57 -1.1 5,828,793 - AO353_26615 0.57 -1.4 5,828,793 - AO353_26615 0.57 +1.2 5,828,793 - AO353_26615 0.57 -0.7 5,828,793 - AO353_26615 0.57 -0.3 5,828,793 - AO353_26615 0.57 -1.4 5,828,793 - AO353_26615 0.57 +1.2 5,828,793 - AO353_26615 0.57 -1.4 5,828,793 - AO353_26615 0.57 -0.9 5,828,891 + AO353_26615 0.65 -0.6 5,828,891 + AO353_26615 0.65 +1.0 5,828,892 - AO353_26615 0.65 -0.8 5,828,892 - AO353_26615 0.65 +0.6 5,828,912 + AO353_26615 0.67 +0.2 5,828,912 + AO353_26615 0.67 +0.7 5,828,912 + AO353_26615 0.67 +0.1 5,828,912 + AO353_26615 0.67 -0.6 5,828,913 - AO353_26615 0.67 -1.1 5,828,913 - AO353_26615 0.67 -0.8 5,828,913 - AO353_26615 0.67 -1.1 5,828,913 - AO353_26615 0.67 +1.0 5,828,913 - AO353_26615 0.67 -0.5 5,828,913 - AO353_26615 0.67 -0.6 5,828,913 - AO353_26615 0.67 +0.4 5,829,121 + AO353_26615 0.84 +0.2 5,829,122 - AO353_26615 0.84 -0.3 5,829,122 - AO353_26615 0.84 -1.7 5,829,176 + AO353_26615 0.88 -0.9 5,829,176 + AO353_26615 0.88 +0.0 5,829,177 - AO353_26615 0.88 -1.2 5,829,179 + AO353_26615 0.88 +2.7 5,829,179 + AO353_26615 0.88 -1.8 5,829,179 + AO353_26615 0.88 -1.3 5,829,179 + AO353_26615 0.88 -0.6 5,829,179 + AO353_26615 0.88 +0.2 5,829,180 - AO353_26615 0.88 -0.5 5,829,180 - AO353_26615 0.88 -1.7 5,829,180 - AO353_26615 0.88 -0.3 5,829,180 - AO353_26615 0.88 +0.5 5,829,275 - -0.3 5,829,324 + -0.4 5,829,324 + -0.1 5,829,324 + -0.9 5,829,324 + -0.7 5,829,325 - -1.5 5,829,325 - -1.8 5,829,325 - -0.8 5,829,325 - +0.2 5,829,325 - -0.3 5,829,325 - +1.3 5,829,329 + +0.5 5,829,329 + -0.8 5,829,329 + +3.3 5,829,330 - +0.9 5,829,330 - -1.4 5,829,338 + -0.2 5,829,338 + +0.4 5,829,339 - +1.4 5,829,339 - +1.2 5,829,379 - -0.1 5,829,379 - +0.4 5,829,394 + +1.0 5,829,395 - +0.4 5,829,395 - -0.6 5,829,448 + AO353_26620 0.25 -1.6 5,829,449 - AO353_26620 0.26 -1.4 5,829,458 - AO353_26620 0.28 -0.6 5,829,458 - AO353_26620 0.28 +0.0 5,829,618 + AO353_26620 0.76 -1.1 5,829,684 + +0.3 5,829,706 + -0.6 5,829,706 + +0.6 5,829,706 + +0.7 5,829,707 - +1.2 5,829,707 - -2.1 5,829,724 - +0.2 5,829,737 + +0.2 5,829,767 + -2.7 5,829,767 + +0.4 5,829,768 - +0.5 5,829,768 - +1.7 5,829,768 - -0.8 5,829,768 - -0.3 5,829,768 - +1.2 5,829,847 + +0.3 5,829,847 + +0.0 5,829,847 + -0.9 5,829,847 + -0.6 5,829,847 + +0.6 5,829,847 + +0.4 5,829,847 + -0.5 5,829,847 + +0.7 5,829,848 - -1.0 5,829,848 - +0.0 5,829,848 - -0.1 5,829,848 - +1.7 5,829,848 - -1.1 5,829,848 - +0.4 5,829,848 - -0.8 5,829,848 - -2.4 5,829,848 - +0.2 5,829,848 - +0.3 5,829,853 + +1.2 5,829,853 + +0.7 5,829,853 + -0.1 5,829,853 + -1.0 5,829,853 + +0.7 5,829,853 + -1.1 5,829,853 + +0.2 5,829,853 + +0.2 5,829,853 + -0.6 5,829,853 + -0.6 5,829,853 + -0.8 5,829,853 + +2.2 5,829,853 + -1.3 5,829,853 + -0.3 5,829,853 + -0.3 5,829,853 + +1.2 5,829,854 - +0.2 5,829,854 - +0.7 5,829,854 - -0.8 5,829,854 - +0.2 5,829,854 - -1.3 5,829,854 - +0.3 5,829,854 - +1.2 5,829,854 - -0.3 5,829,854 - -1.1 5,829,854 - -1.6 5,829,854 - +0.0 5,829,854 - +0.4 5,829,854 - -1.3 5,829,854 - +2.0 5,829,854 - -0.1 5,829,862 + -0.7 5,829,862 + +0.4 5,829,862 + -0.3 5,829,862 + -0.3 5,829,862 + -0.3 5,829,862 + -0.9 5,829,862 + +1.2 5,829,862 + -0.7 5,829,862 + -1.6 5,829,862 + -0.4 5,829,862 + -0.5 5,829,863 - +0.7 5,829,863 - -1.3 5,829,863 - +1.2 5,829,863 - +0.7 5,829,863 - -0.3 5,829,863 - -0.2 5,829,863 - -1.3 5,829,863 - -0.2 5,829,863 - -1.5 5,829,863 - +0.7 5,829,910 + AO353_26625 0.12 +0.7 5,830,042 + AO353_26625 0.28 -0.8 5,830,255 + AO353_26625 0.52 +0.0 5,830,255 + AO353_26625 0.52 -0.8 5,830,256 - AO353_26625 0.53 +0.6 5,830,356 - AO353_26625 0.64 +0.7 5,830,356 - AO353_26625 0.64 +0.7 5,830,356 - AO353_26625 0.64 -0.2 5,830,356 - AO353_26625 0.64 +1.5 5,830,356 - AO353_26625 0.64 +0.4 5,830,405 + AO353_26625 0.70 -0.8 5,830,405 + AO353_26625 0.70 +0.7 5,830,405 + AO353_26625 0.70 -0.6 5,830,405 + AO353_26625 0.70 +0.2 5,830,405 + AO353_26625 0.70 -1.3 5,830,405 + AO353_26625 0.70 +0.0 5,830,405 + AO353_26625 0.70 -0.6 5,830,483 - AO353_26625 0.79 +0.6 5,830,483 - AO353_26625 0.79 -0.3 5,830,483 - AO353_26625 0.79 +0.7 5,830,568 + AO353_26625 0.89 -1.8 5,830,692 + -0.8 5,830,692 + -0.9 5,830,692 + +0.2 5,830,692 + +0.5 5,830,693 - +0.2 5,830,693 - -1.3 5,830,693 - +0.1
Or see this region's nucleotide sequence