Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26460 and AO353_26465 are separated by 765 nucleotides AO353_26465 and AO353_26470 are separated by 65 nucleotides AO353_26470 and AO353_26475 are separated by 54 nucleotides
AO353_26460: AO353_26460 - hypothetical protein, at 5,798,139 to 5,798,525
_26460
AO353_26465: AO353_26465 - hypothetical protein, at 5,799,291 to 5,799,527
_26465
AO353_26470: AO353_26470 - hypothetical protein, at 5,799,593 to 5,799,826
_26470
AO353_26475: AO353_26475 - hypothetical protein, at 5,799,881 to 5,800,117
_26475
Position (kb)
5799
5800 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5798.421 kb on + strand, within AO353_26460 at 5798.421 kb on + strand, within AO353_26460 at 5798.421 kb on + strand, within AO353_26460 at 5798.422 kb on - strand, within AO353_26460 at 5798.422 kb on - strand, within AO353_26460 at 5798.422 kb on - strand, within AO353_26460 at 5798.422 kb on - strand, within AO353_26460 at 5798.492 kb on - strand at 5798.517 kb on + strand at 5798.517 kb on + strand at 5798.517 kb on + strand at 5798.524 kb on - strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.556 kb on + strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.557 kb on - strand at 5798.558 kb on + strand at 5798.558 kb on + strand at 5798.558 kb on + strand at 5798.558 kb on + strand at 5798.558 kb on + strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.559 kb on - strand at 5798.567 kb on + strand at 5798.595 kb on + strand at 5798.686 kb on + strand at 5798.686 kb on + strand at 5798.686 kb on + strand at 5798.686 kb on + strand at 5798.687 kb on - strand at 5798.687 kb on - strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.776 kb on + strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.777 kb on - strand at 5798.784 kb on - strand at 5798.786 kb on + strand at 5798.801 kb on + strand at 5798.802 kb on - strand at 5798.976 kb on + strand at 5798.976 kb on + strand at 5798.976 kb on + strand at 5799.064 kb on - strand at 5799.118 kb on - strand at 5799.130 kb on - strand at 5799.180 kb on + strand at 5799.180 kb on + strand at 5799.181 kb on - strand at 5799.181 kb on - strand at 5799.181 kb on - strand at 5799.181 kb on - strand at 5799.181 kb on - strand at 5799.288 kb on + strand at 5799.288 kb on + strand at 5799.288 kb on + strand at 5799.288 kb on + strand at 5799.289 kb on - strand at 5799.289 kb on - strand at 5799.289 kb on - strand at 5799.289 kb on - strand at 5799.292 kb on + strand at 5799.293 kb on - strand at 5799.303 kb on + strand at 5799.303 kb on + strand at 5799.304 kb on - strand at 5799.368 kb on + strand, within AO353_26465 at 5799.413 kb on + strand, within AO353_26465 at 5799.413 kb on + strand, within AO353_26465 at 5799.413 kb on + strand, within AO353_26465 at 5799.413 kb on + strand, within AO353_26465 at 5799.414 kb on - strand, within AO353_26465 at 5799.414 kb on - strand, within AO353_26465 at 5799.527 kb on + strand at 5799.528 kb on - strand at 5799.528 kb on - strand at 5799.572 kb on - strand at 5799.594 kb on + strand at 5799.594 kb on + strand at 5799.594 kb on + strand at 5799.594 kb on + strand at 5799.594 kb on + strand at 5799.594 kb on + strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.595 kb on - strand at 5799.596 kb on + strand at 5799.597 kb on - strand at 5799.597 kb on - strand at 5799.856 kb on + strand at 5799.893 kb on + strand at 5799.893 kb on + strand at 5799.894 kb on - strand at 5799.898 kb on + strand at 5799.898 kb on + strand at 5799.898 kb on + strand at 5799.898 kb on + strand at 5799.899 kb on - strand at 5799.899 kb on - strand at 5799.899 kb on - strand at 5799.899 kb on - strand at 5799.902 kb on - strand at 5799.902 kb on - strand at 5799.902 kb on - strand at 5799.940 kb on + strand, within AO353_26475 at 5799.940 kb on + strand, within AO353_26475 at 5799.940 kb on + strand, within AO353_26475 at 5799.941 kb on - strand, within AO353_26475 at 5799.941 kb on - strand, within AO353_26475 at 5799.941 kb on - strand, within AO353_26475 at 5799.975 kb on + strand, within AO353_26475 at 5800.024 kb on + strand, within AO353_26475 at 5800.063 kb on + strand, within AO353_26475 at 5800.063 kb on + strand, within AO353_26475 at 5800.064 kb on - strand, within AO353_26475 at 5800.064 kb on - strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.080 kb on + strand, within AO353_26475 at 5800.081 kb on - strand, within AO353_26475 at 5800.081 kb on - strand, within AO353_26475 at 5800.081 kb on - strand, within AO353_26475 at 5800.081 kb on - strand, within AO353_26475 at 5800.109 kb on + strand at 5800.110 kb on - strand at 5800.110 kb on - strand at 5800.110 kb on - strand at 5800.110 kb on - strand at 5800.132 kb on + strand at 5800.132 kb on + strand at 5800.133 kb on - strand at 5800.149 kb on + strand at 5800.149 kb on + strand at 5800.150 kb on - strand at 5800.150 kb on - strand at 5800.150 kb on - strand at 5800.150 kb on - strand at 5800.153 kb on - strand at 5800.163 kb on + strand at 5800.175 kb on + strand at 5800.175 kb on + strand at 5800.175 kb on + strand at 5800.176 kb on - strand at 5800.176 kb on - strand at 5800.176 kb on - strand at 5800.176 kb on - strand at 5800.176 kb on - strand at 5800.295 kb on + strand at 5800.296 kb on - strand at 5800.296 kb on - strand at 5800.405 kb on + strand at 5800.406 kb on - strand at 5800.465 kb on + strand at 5800.465 kb on + strand at 5800.466 kb on - strand at 5800.466 kb on - strand at 5800.491 kb on + strand at 5800.492 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 5,798,421 + AO353_26460 0.73 -0.9 5,798,421 + AO353_26460 0.73 -1.1 5,798,421 + AO353_26460 0.73 +0.7 5,798,422 - AO353_26460 0.73 +0.2 5,798,422 - AO353_26460 0.73 -1.4 5,798,422 - AO353_26460 0.73 +1.1 5,798,422 - AO353_26460 0.73 -0.6 5,798,492 - +1.1 5,798,517 + -0.1 5,798,517 + -2.1 5,798,517 + +0.4 5,798,524 - +0.3 5,798,556 + +0.6 5,798,556 + -1.4 5,798,556 + -0.3 5,798,556 + -0.2 5,798,556 + -0.6 5,798,556 + +1.1 5,798,556 + -0.3 5,798,556 + -0.9 5,798,556 + +0.1 5,798,556 + -1.4 5,798,556 + -0.1 5,798,556 + +1.2 5,798,557 - +0.4 5,798,557 - -0.9 5,798,557 - +1.7 5,798,557 - -1.0 5,798,557 - +0.8 5,798,557 - +0.4 5,798,557 - +0.1 5,798,557 - -0.1 5,798,557 - -0.1 5,798,557 - -1.1 5,798,557 - +0.3 5,798,557 - -0.2 5,798,558 + -1.6 5,798,558 + +1.7 5,798,558 + -0.8 5,798,558 + +0.6 5,798,558 + -1.1 5,798,559 - -1.0 5,798,559 - -0.3 5,798,559 - -0.1 5,798,559 - -0.4 5,798,559 - +0.3 5,798,559 - -2.0 5,798,559 - -0.4 5,798,559 - -1.1 5,798,559 - +0.5 5,798,559 - -0.4 5,798,559 - -0.9 5,798,559 - -0.1 5,798,567 + +1.7 5,798,595 + +1.0 5,798,686 + -0.6 5,798,686 + -0.6 5,798,686 + +0.7 5,798,686 + -0.4 5,798,687 - +0.0 5,798,687 - +2.7 5,798,776 + +0.1 5,798,776 + +0.4 5,798,776 + +0.5 5,798,776 + +0.7 5,798,776 + -0.3 5,798,776 + -0.2 5,798,776 + -0.9 5,798,777 - -0.9 5,798,777 - -1.6 5,798,777 - -0.9 5,798,777 - +0.5 5,798,777 - -0.9 5,798,777 - +1.1 5,798,777 - +0.0 5,798,777 - +1.7 5,798,777 - +0.1 5,798,777 - -1.1 5,798,784 - -0.1 5,798,786 + -1.1 5,798,801 + +2.7 5,798,802 - +0.1 5,798,976 + +0.7 5,798,976 + +0.1 5,798,976 + -0.3 5,799,064 - +0.6 5,799,118 - +0.3 5,799,130 - +0.0 5,799,180 + -0.3 5,799,180 + -0.9 5,799,181 - +0.1 5,799,181 - -0.1 5,799,181 - +0.1 5,799,181 - -1.3 5,799,181 - +0.3 5,799,288 + -1.9 5,799,288 + -2.0 5,799,288 + -0.3 5,799,288 + -0.0 5,799,289 - -0.2 5,799,289 - -0.6 5,799,289 - -1.3 5,799,289 - -1.7 5,799,292 + -2.0 5,799,293 - -1.3 5,799,303 + -0.6 5,799,303 + -0.6 5,799,304 - -0.4 5,799,368 + AO353_26465 0.32 -0.2 5,799,413 + AO353_26465 0.51 -1.6 5,799,413 + AO353_26465 0.51 -0.9 5,799,413 + AO353_26465 0.51 -1.9 5,799,413 + AO353_26465 0.51 -1.0 5,799,414 - AO353_26465 0.52 +0.1 5,799,414 - AO353_26465 0.52 -1.2 5,799,527 + -0.6 5,799,528 - +0.3 5,799,528 - -1.9 5,799,572 - -0.1 5,799,594 + +1.3 5,799,594 + -0.3 5,799,594 + -0.3 5,799,594 + +0.3 5,799,594 + -0.3 5,799,594 + -0.7 5,799,595 - +1.7 5,799,595 - -0.6 5,799,595 - +0.7 5,799,595 - -0.6 5,799,595 - -1.1 5,799,595 - +0.3 5,799,595 - +1.7 5,799,595 - +0.1 5,799,595 - -0.3 5,799,596 + +0.9 5,799,597 - +0.1 5,799,597 - +0.1 5,799,856 + -1.1 5,799,893 + -0.8 5,799,893 + -0.1 5,799,894 - -1.0 5,799,898 + +0.1 5,799,898 + +0.3 5,799,898 + -0.6 5,799,898 + -1.6 5,799,899 - -1.6 5,799,899 - +1.0 5,799,899 - +0.0 5,799,899 - +0.1 5,799,902 - -0.3 5,799,902 - +0.5 5,799,902 - -1.2 5,799,940 + AO353_26475 0.25 -0.3 5,799,940 + AO353_26475 0.25 +0.4 5,799,940 + AO353_26475 0.25 +0.6 5,799,941 - AO353_26475 0.25 +0.4 5,799,941 - AO353_26475 0.25 +0.7 5,799,941 - AO353_26475 0.25 -1.4 5,799,975 + AO353_26475 0.40 +0.1 5,800,024 + AO353_26475 0.60 -1.1 5,800,063 + AO353_26475 0.77 +0.1 5,800,063 + AO353_26475 0.77 -1.1 5,800,064 - AO353_26475 0.77 -1.0 5,800,064 - AO353_26475 0.77 +0.7 5,800,080 + AO353_26475 0.84 -0.8 5,800,080 + AO353_26475 0.84 -0.7 5,800,080 + AO353_26475 0.84 -0.3 5,800,080 + AO353_26475 0.84 -0.3 5,800,080 + AO353_26475 0.84 -0.1 5,800,080 + AO353_26475 0.84 +0.7 5,800,080 + AO353_26475 0.84 -0.1 5,800,080 + AO353_26475 0.84 +0.1 5,800,080 + AO353_26475 0.84 -0.2 5,800,081 - AO353_26475 0.84 -0.9 5,800,081 - AO353_26475 0.84 -0.9 5,800,081 - AO353_26475 0.84 +0.7 5,800,081 - AO353_26475 0.84 -0.4 5,800,109 + -0.7 5,800,110 - -0.7 5,800,110 - +0.1 5,800,110 - +0.7 5,800,110 - -0.1 5,800,132 + -0.3 5,800,132 + -2.5 5,800,133 - +0.4 5,800,149 + -1.0 5,800,149 + -0.7 5,800,150 - -0.7 5,800,150 - -1.4 5,800,150 - -0.4 5,800,150 - -0.7 5,800,153 - +0.6 5,800,163 + -0.6 5,800,175 + +0.7 5,800,175 + -1.4 5,800,175 + -1.1 5,800,176 - -1.4 5,800,176 - -0.1 5,800,176 - -1.8 5,800,176 - -0.4 5,800,176 - -0.8 5,800,295 + -0.6 5,800,296 - +1.3 5,800,296 - +0.9 5,800,405 + -1.6 5,800,406 - -0.4 5,800,465 + -0.1 5,800,465 + +0.1 5,800,466 - -1.3 5,800,466 - -0.1 5,800,491 + +1.3 5,800,492 - +1.7
Or see this region's nucleotide sequence