Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24165 and AO353_24170 are separated by 6 nucleotides AO353_24170 and AO353_24175 are separated by 446 nucleotides AO353_24175 and AO353_24180 are separated by 103 nucleotides AO353_24180 and AO353_24185 are separated by 173 nucleotides
AO353_24165: AO353_24165 - hypothetical protein, at 5,318,022 to 5,318,435
_24165
AO353_24170: AO353_24170 - hypothetical protein, at 5,318,442 to 5,318,651
_24170
AO353_24175: AO353_24175 - hypothetical protein, at 5,319,098 to 5,319,319
_24175
AO353_24180: AO353_24180 - transcriptional regulator, at 5,319,423 to 5,319,878
_24180
AO353_24185: AO353_24185 - serine/threonine protein phosphatase, at 5,320,052 to 5,320,783
_24185
Position (kb)
5319
5320 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.456 kb on + strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.457 kb on - strand at 5318.544 kb on + strand, within AO353_24170 at 5318.544 kb on + strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.545 kb on - strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.580 kb on + strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.581 kb on - strand, within AO353_24170 at 5318.615 kb on + strand, within AO353_24170 at 5318.615 kb on + strand, within AO353_24170 at 5318.616 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.619 kb on - strand, within AO353_24170 at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.663 kb on + strand at 5318.664 kb on - strand at 5318.706 kb on - strand at 5318.884 kb on + strand at 5318.884 kb on + strand at 5318.885 kb on - strand at 5318.885 kb on - strand at 5318.970 kb on + strand at 5319.019 kb on - strand at 5319.019 kb on - strand at 5319.019 kb on - strand at 5319.110 kb on - strand at 5319.110 kb on - strand at 5319.148 kb on + strand, within AO353_24175 at 5319.149 kb on - strand, within AO353_24175 at 5319.194 kb on - strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.236 kb on + strand, within AO353_24175 at 5319.237 kb on - strand, within AO353_24175 at 5319.237 kb on - strand, within AO353_24175 at 5319.277 kb on - strand, within AO353_24175 at 5319.290 kb on + strand, within AO353_24175 at 5319.291 kb on - strand, within AO353_24175 at 5319.306 kb on + strand at 5319.352 kb on + strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.353 kb on - strand at 5319.362 kb on + strand at 5319.366 kb on + strand at 5319.366 kb on + strand at 5319.366 kb on + strand at 5319.367 kb on - strand at 5319.367 kb on - strand at 5319.367 kb on - strand at 5319.396 kb on + strand at 5319.396 kb on + strand at 5319.396 kb on + strand at 5319.397 kb on - strand at 5319.397 kb on - strand at 5319.397 kb on - strand at 5319.507 kb on + strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.508 kb on - strand, within AO353_24180 at 5319.552 kb on - strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.777 kb on + strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.778 kb on - strand, within AO353_24180 at 5319.905 kb on + strand at 5319.905 kb on + strand at 5319.905 kb on + strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5319.906 kb on - strand at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.009 kb on - strand at 5320.025 kb on + strand at 5320.026 kb on - strand at 5320.031 kb on + strand at 5320.032 kb on - strand at 5320.047 kb on + strand at 5320.047 kb on + strand at 5320.048 kb on - strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.118 kb on + strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.144 kb on + strand, within AO353_24185 at 5320.145 kb on - strand, within AO353_24185 at 5320.185 kb on + strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.206 kb on - strand, within AO353_24185 at 5320.229 kb on + strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.296 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.446 kb on - strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.670 kb on - strand, within AO353_24185 at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.782 kb on - strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.866 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 5,318,456 + +0.3 5,318,456 + -1.1 5,318,456 + -1.7 5,318,456 + -1.7 5,318,457 - -1.8 5,318,457 - +0.1 5,318,457 - +2.0 5,318,457 - -0.0 5,318,544 + AO353_24170 0.49 -1.1 5,318,544 + AO353_24170 0.49 +1.1 5,318,545 - AO353_24170 0.49 -1.3 5,318,545 - AO353_24170 0.49 -1.5 5,318,545 - AO353_24170 0.49 +0.7 5,318,580 + AO353_24170 0.66 +0.1 5,318,580 + AO353_24170 0.66 -0.1 5,318,580 + AO353_24170 0.66 -0.1 5,318,580 + AO353_24170 0.66 -0.7 5,318,581 - AO353_24170 0.66 +0.1 5,318,581 - AO353_24170 0.66 +0.7 5,318,581 - AO353_24170 0.66 +0.9 5,318,615 + AO353_24170 0.82 -0.7 5,318,615 + AO353_24170 0.82 -0.5 5,318,616 - AO353_24170 0.83 +1.7 5,318,619 - AO353_24170 0.84 -0.9 5,318,619 - AO353_24170 0.84 +0.8 5,318,619 - AO353_24170 0.84 +2.1 5,318,619 - AO353_24170 0.84 -0.2 5,318,619 - AO353_24170 0.84 -1.3 5,318,663 + +2.7 5,318,663 + +0.3 5,318,663 + -0.3 5,318,663 + +0.9 5,318,663 + +1.7 5,318,664 - -1.1 5,318,706 - +1.7 5,318,884 + -1.3 5,318,884 + +0.3 5,318,885 - +0.3 5,318,885 - -1.1 5,318,970 + -0.1 5,319,019 - -1.2 5,319,019 - +0.1 5,319,019 - -1.5 5,319,110 - +0.1 5,319,110 - +1.0 5,319,148 + AO353_24175 0.23 +2.1 5,319,149 - AO353_24175 0.23 -0.3 5,319,194 - AO353_24175 0.43 +0.5 5,319,236 + AO353_24175 0.62 +5.5 5,319,236 + AO353_24175 0.62 +0.7 5,319,236 + AO353_24175 0.62 -3.0 5,319,236 + AO353_24175 0.62 +0.1 5,319,237 - AO353_24175 0.63 -0.7 5,319,237 - AO353_24175 0.63 -1.0 5,319,277 - AO353_24175 0.81 -2.2 5,319,290 + AO353_24175 0.86 +0.3 5,319,291 - AO353_24175 0.87 -0.0 5,319,306 + +0.3 5,319,352 + -0.3 5,319,353 - -1.1 5,319,353 - +0.3 5,319,353 - +0.7 5,319,353 - +1.7 5,319,353 - -0.7 5,319,353 - -1.0 5,319,353 - -0.8 5,319,362 + +0.7 5,319,366 + -0.1 5,319,366 + +1.4 5,319,366 + -0.6 5,319,367 - -1.3 5,319,367 - -0.9 5,319,367 - +1.9 5,319,396 + -0.4 5,319,396 + +1.1 5,319,396 + -0.4 5,319,397 - -1.4 5,319,397 - +0.2 5,319,397 - -0.2 5,319,507 + AO353_24180 0.18 -0.9 5,319,508 - AO353_24180 0.19 -1.2 5,319,508 - AO353_24180 0.19 -1.8 5,319,508 - AO353_24180 0.19 -1.1 5,319,552 - AO353_24180 0.28 -0.7 5,319,777 + AO353_24180 0.78 -0.9 5,319,777 + AO353_24180 0.78 -1.0 5,319,777 + AO353_24180 0.78 -1.2 5,319,778 - AO353_24180 0.78 -0.1 5,319,778 - AO353_24180 0.78 +0.5 5,319,778 - AO353_24180 0.78 +0.1 5,319,778 - AO353_24180 0.78 -2.0 5,319,778 - AO353_24180 0.78 +0.3 5,319,778 - AO353_24180 0.78 -2.1 5,319,778 - AO353_24180 0.78 +1.1 5,319,778 - AO353_24180 0.78 -1.1 5,319,778 - AO353_24180 0.78 -1.5 5,319,905 + -1.1 5,319,905 + +0.6 5,319,905 + +0.7 5,319,906 - -0.9 5,319,906 - +0.3 5,319,906 - -0.5 5,319,906 - -0.7 5,320,008 + +0.3 5,320,008 + +0.9 5,320,008 + -0.3 5,320,009 - +0.1 5,320,025 + +0.4 5,320,026 - -0.3 5,320,031 + -0.9 5,320,032 - -0.1 5,320,047 + -0.5 5,320,047 + -0.3 5,320,048 - -0.9 5,320,061 + -0.7 5,320,061 + +0.0 5,320,061 + -0.7 5,320,061 + -1.1 5,320,061 + +0.1 5,320,061 + +0.7 5,320,061 + +0.3 5,320,118 + -0.1 5,320,119 - +1.5 5,320,119 - -1.1 5,320,119 - -0.7 5,320,119 - -0.3 5,320,125 + -0.4 5,320,125 + +0.7 5,320,125 + +0.7 5,320,126 - AO353_24185 0.10 -0.4 5,320,126 - AO353_24185 0.10 -0.7 5,320,126 - AO353_24185 0.10 -0.8 5,320,144 + AO353_24185 0.13 +1.3 5,320,145 - AO353_24185 0.13 +1.7 5,320,185 + AO353_24185 0.18 -0.7 5,320,186 - AO353_24185 0.18 +0.1 5,320,186 - AO353_24185 0.18 +1.3 5,320,186 - AO353_24185 0.18 -0.7 5,320,205 + AO353_24185 0.21 -1.8 5,320,205 + AO353_24185 0.21 -0.9 5,320,205 + AO353_24185 0.21 -0.3 5,320,206 - AO353_24185 0.21 +0.9 5,320,229 + AO353_24185 0.24 -1.9 5,320,230 - AO353_24185 0.24 +0.7 5,320,230 - AO353_24185 0.24 -0.5 5,320,296 + AO353_24185 0.33 -0.4 5,320,360 + AO353_24185 0.42 -0.5 5,320,360 + AO353_24185 0.42 +0.4 5,320,360 + AO353_24185 0.42 -0.3 5,320,360 + AO353_24185 0.42 +0.8 5,320,446 - AO353_24185 0.54 -0.7 5,320,669 + AO353_24185 0.84 +0.3 5,320,669 + AO353_24185 0.84 -1.5 5,320,670 - AO353_24185 0.84 +1.1 5,320,781 + +0.2 5,320,781 + -1.2 5,320,781 + +1.3 5,320,781 + -0.9 5,320,782 - +0.3 5,320,785 + -1.1 5,320,785 + -2.0 5,320,785 + -0.8 5,320,785 + -0.1 5,320,785 + +0.1 5,320,785 + +1.1 5,320,785 + -1.1 5,320,785 + +0.4 5,320,786 - +0.5 5,320,786 - +0.7 5,320,786 - -0.6 5,320,786 - +0.1 5,320,786 - -3.1 5,320,786 - +2.7 5,320,786 - -0.1 5,320,786 - -1.5 5,320,840 + -0.9 5,320,840 + -1.7 5,320,840 + +0.1 5,320,866 + -1.0 5,320,878 + -0.3 5,320,878 + -0.7 5,320,878 + -1.6 5,320,878 + -2.6 5,320,878 + -1.1 5,320,878 + -0.8
Or see this region's nucleotide sequence