Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22840 and AO353_22845 are separated by 187 nucleotides AO353_22845 and AO353_22850 are separated by 244 nucleotides AO353_22850 and AO353_22855 are separated by 191 nucleotides
AO353_22840: AO353_22840 - DNA-binding protein, at 5,007,068 to 5,008,501
_22840
AO353_22845: AO353_22845 - GNAT family acetyltransferase, at 5,008,689 to 5,009,210
_22845
AO353_22850: AO353_22850 - hypothetical protein, at 5,009,455 to 5,009,949
_22850
AO353_22855: AO353_22855 - hypothetical protein, at 5,010,141 to 5,010,362
_22855
Position (kb)
5008
5009
5010 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.747 kb on + strand, within AO353_22840 at 5007.748 kb on - strand, within AO353_22840 at 5007.748 kb on - strand, within AO353_22840 at 5007.748 kb on - strand, within AO353_22840 at 5007.903 kb on - strand, within AO353_22840 at 5008.146 kb on + strand, within AO353_22840 at 5008.146 kb on + strand, within AO353_22840 at 5008.278 kb on + strand, within AO353_22840 at 5008.278 kb on + strand, within AO353_22840 at 5008.278 kb on + strand, within AO353_22840 at 5008.278 kb on + strand, within AO353_22840 at 5008.278 kb on + strand, within AO353_22840 at 5008.279 kb on - strand, within AO353_22840 at 5008.279 kb on - strand, within AO353_22840 at 5008.279 kb on - strand, within AO353_22840 at 5008.279 kb on - strand, within AO353_22840 at 5008.279 kb on - strand, within AO353_22840 at 5008.317 kb on + strand, within AO353_22840 at 5008.318 kb on - strand, within AO353_22840 at 5008.318 kb on - strand, within AO353_22840 at 5008.332 kb on + strand, within AO353_22840 at 5008.333 kb on - strand, within AO353_22840 at 5008.333 kb on - strand, within AO353_22840 at 5008.333 kb on - strand, within AO353_22840 at 5008.333 kb on - strand, within AO353_22840 at 5008.333 kb on - strand, within AO353_22840 at 5008.427 kb on + strand at 5008.428 kb on - strand at 5008.428 kb on - strand at 5008.428 kb on - strand at 5008.449 kb on + strand at 5008.530 kb on + strand at 5008.530 kb on + strand at 5008.531 kb on - strand at 5008.650 kb on + strand at 5008.651 kb on - strand at 5008.668 kb on + strand at 5008.668 kb on + strand at 5008.668 kb on + strand at 5008.668 kb on + strand at 5008.668 kb on + strand at 5008.669 kb on - strand at 5008.724 kb on + strand at 5008.761 kb on + strand, within AO353_22845 at 5008.762 kb on - strand, within AO353_22845 at 5009.064 kb on + strand, within AO353_22845 at 5009.064 kb on + strand, within AO353_22845 at 5009.064 kb on + strand, within AO353_22845 at 5009.064 kb on + strand, within AO353_22845 at 5009.064 kb on + strand, within AO353_22845 at 5009.065 kb on - strand, within AO353_22845 at 5009.065 kb on - strand, within AO353_22845 at 5009.065 kb on - strand, within AO353_22845 at 5009.065 kb on - strand, within AO353_22845 at 5009.065 kb on - strand, within AO353_22845 at 5009.095 kb on - strand, within AO353_22845 at 5009.137 kb on - strand, within AO353_22845 at 5009.137 kb on - strand, within AO353_22845 at 5009.276 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.389 kb on - strand at 5009.428 kb on + strand at 5009.465 kb on + strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.494 kb on + strand at 5009.494 kb on + strand at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5010.033 kb on + strand at 5010.033 kb on + strand at 5010.033 kb on + strand at 5010.034 kb on - strand at 5010.034 kb on - strand at 5010.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 5,007,747 + AO353_22840 0.47 +0.9 5,007,747 + AO353_22840 0.47 -0.5 5,007,747 + AO353_22840 0.47 -1.1 5,007,747 + AO353_22840 0.47 -0.2 5,007,747 + AO353_22840 0.47 -1.0 5,007,747 + AO353_22840 0.47 -0.4 5,007,747 + AO353_22840 0.47 -0.2 5,007,747 + AO353_22840 0.47 -0.4 5,007,747 + AO353_22840 0.47 +2.8 5,007,747 + AO353_22840 0.47 -1.5 5,007,747 + AO353_22840 0.47 +0.6 5,007,748 - AO353_22840 0.47 +0.8 5,007,748 - AO353_22840 0.47 +1.8 5,007,748 - AO353_22840 0.47 +0.5 5,007,903 - AO353_22840 0.58 -0.0 5,008,146 + AO353_22840 0.75 +0.8 5,008,146 + AO353_22840 0.75 -0.7 5,008,278 + AO353_22840 0.84 +0.3 5,008,278 + AO353_22840 0.84 -0.2 5,008,278 + AO353_22840 0.84 -0.2 5,008,278 + AO353_22840 0.84 -0.8 5,008,278 + AO353_22840 0.84 -1.2 5,008,279 - AO353_22840 0.84 +1.4 5,008,279 - AO353_22840 0.84 -0.2 5,008,279 - AO353_22840 0.84 -1.1 5,008,279 - AO353_22840 0.84 +0.9 5,008,279 - AO353_22840 0.84 +0.5 5,008,317 + AO353_22840 0.87 -0.0 5,008,318 - AO353_22840 0.87 -0.0 5,008,318 - AO353_22840 0.87 -0.8 5,008,332 + AO353_22840 0.88 +2.2 5,008,333 - AO353_22840 0.88 +2.4 5,008,333 - AO353_22840 0.88 -0.5 5,008,333 - AO353_22840 0.88 +0.5 5,008,333 - AO353_22840 0.88 -0.2 5,008,333 - AO353_22840 0.88 +1.2 5,008,427 + -1.6 5,008,428 - +1.4 5,008,428 - -1.3 5,008,428 - -1.0 5,008,449 + -1.2 5,008,530 + -0.5 5,008,530 + +1.4 5,008,531 - -0.9 5,008,650 + +1.0 5,008,651 - -0.0 5,008,668 + -0.5 5,008,668 + +1.0 5,008,668 + -1.4 5,008,668 + +1.0 5,008,668 + +0.8 5,008,669 - +0.8 5,008,724 + -0.3 5,008,761 + AO353_22845 0.14 +0.8 5,008,762 - AO353_22845 0.14 -0.6 5,009,064 + AO353_22845 0.72 -0.2 5,009,064 + AO353_22845 0.72 -0.2 5,009,064 + AO353_22845 0.72 +0.2 5,009,064 + AO353_22845 0.72 -1.0 5,009,064 + AO353_22845 0.72 -1.7 5,009,065 - AO353_22845 0.72 +0.3 5,009,065 - AO353_22845 0.72 -0.0 5,009,065 - AO353_22845 0.72 -0.0 5,009,065 - AO353_22845 0.72 +1.8 5,009,065 - AO353_22845 0.72 +5.6 5,009,095 - AO353_22845 0.78 -0.2 5,009,137 - AO353_22845 0.86 -1.5 5,009,137 - AO353_22845 0.86 +0.2 5,009,276 - -0.8 5,009,305 - +0.6 5,009,305 - -0.6 5,009,305 - -1.0 5,009,305 - -0.8 5,009,389 - -0.5 5,009,428 + +1.4 5,009,465 + +0.4 5,009,466 - +1.1 5,009,466 - -0.8 5,009,466 - -0.1 5,009,466 - -0.5 5,009,466 - +1.0 5,009,466 - -1.8 5,009,494 + +0.1 5,009,494 + -0.8 5,009,641 + AO353_22850 0.38 -1.4 5,009,641 + AO353_22850 0.38 -1.5 5,009,641 + AO353_22850 0.38 +0.5 5,009,641 + AO353_22850 0.38 -0.9 5,009,641 + AO353_22850 0.38 +1.1 5,009,641 + AO353_22850 0.38 -1.9 5,009,641 + AO353_22850 0.38 -1.8 5,009,641 + AO353_22850 0.38 -0.5 5,009,642 - AO353_22850 0.38 +0.6 5,009,642 - AO353_22850 0.38 -0.9 5,009,642 - AO353_22850 0.38 +0.9 5,010,033 + +0.1 5,010,033 + +0.7 5,010,033 + +0.5 5,010,034 - +0.8 5,010,034 - -0.8 5,010,066 - -0.8
Or see this region's nucleotide sequence