Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22065 and AO353_22070 are separated by 75 nucleotides AO353_22070 and AO353_22075 are separated by 86 nucleotides AO353_22075 and AO353_22080 overlap by 4 nucleotides
AO353_22065: AO353_22065 - zinc-binding protein, at 4,831,841 to 4,832,245
_22065
AO353_22070: AO353_22070 - DnrE protein, at 4,832,321 to 4,832,998
_22070
AO353_22075: AO353_22075 - hypothetical protein, at 4,833,085 to 4,833,732
_22075
AO353_22080: AO353_22080 - histidine kinase, at 4,833,729 to 4,835,531
_22080
Position (kb)
4832
4833 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4831.420 kb on + strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand at 4831.705 kb on - strand at 4831.750 kb on - strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.776 kb on - strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.832 kb on - strand at 4831.832 kb on - strand at 4831.886 kb on - strand, within AO353_22065 at 4831.975 kb on - strand, within AO353_22065 at 4832.217 kb on + strand at 4832.218 kb on - strand at 4832.294 kb on + strand at 4832.471 kb on + strand, within AO353_22070 at 4832.471 kb on + strand, within AO353_22070 at 4832.472 kb on - strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.713 kb on - strand, within AO353_22070 at 4832.808 kb on + strand, within AO353_22070 at 4832.973 kb on - strand at 4832.981 kb on - strand at 4833.003 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.064 kb on - strand at 4833.064 kb on - strand at 4833.153 kb on + strand, within AO353_22075 at 4833.153 kb on + strand, within AO353_22075 at 4833.377 kb on + strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.416 kb on + strand, within AO353_22075 at 4833.417 kb on - strand, within AO353_22075 at 4833.497 kb on + strand, within AO353_22075 at 4833.497 kb on + strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.511 kb on + strand, within AO353_22075 at 4833.697 kb on + strand at 4833.697 kb on + strand at 4833.740 kb on + strand at 4833.740 kb on + strand at 4833.741 kb on - strand at 4833.816 kb on + strand at 4833.816 kb on + strand at 4833.816 kb on + strand at 4833.817 kb on - strand at 4833.960 kb on + strand, within AO353_22080 at 4833.960 kb on + strand, within AO353_22080
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 4,831,420 + -1.5 4,831,421 - -0.5 4,831,421 - -0.0 4,831,421 - +0.4 4,831,478 - +0.6 4,831,478 - -1.2 4,831,478 - -0.4 4,831,705 - +0.2 4,831,750 - +1.8 4,831,775 + -1.8 4,831,775 + -0.4 4,831,775 + +0.5 4,831,775 + +0.6 4,831,775 + -1.0 4,831,776 - +0.6 4,831,779 + +1.4 4,831,779 + +0.9 4,831,779 + -1.0 4,831,779 + -0.7 4,831,779 + +0.3 4,831,779 + -0.8 4,831,779 + -0.6 4,831,780 - -0.6 4,831,780 - -1.3 4,831,780 - -0.4 4,831,780 - -0.3 4,831,780 - -0.8 4,831,780 - -0.4 4,831,780 - +1.8 4,831,780 - +0.1 4,831,832 - -0.2 4,831,832 - -1.2 4,831,886 - AO353_22065 0.11 +0.6 4,831,975 - AO353_22065 0.33 -1.4 4,832,217 + -0.1 4,832,218 - +0.5 4,832,294 + +0.6 4,832,471 + AO353_22070 0.22 -0.5 4,832,471 + AO353_22070 0.22 +1.1 4,832,472 - AO353_22070 0.22 +1.8 4,832,564 + AO353_22070 0.36 -0.2 4,832,564 + AO353_22070 0.36 -1.2 4,832,564 + AO353_22070 0.36 +0.2 4,832,564 + AO353_22070 0.36 -1.0 4,832,564 + AO353_22070 0.36 -0.4 4,832,564 + AO353_22070 0.36 -0.2 4,832,564 + AO353_22070 0.36 -0.5 4,832,564 + AO353_22070 0.36 -0.2 4,832,564 + AO353_22070 0.36 +0.8 4,832,564 + AO353_22070 0.36 -0.2 4,832,565 - AO353_22070 0.36 -0.0 4,832,565 - AO353_22070 0.36 -0.4 4,832,565 - AO353_22070 0.36 +0.8 4,832,565 - AO353_22070 0.36 -0.0 4,832,565 - AO353_22070 0.36 -1.4 4,832,565 - AO353_22070 0.36 -1.2 4,832,713 - AO353_22070 0.58 -1.0 4,832,808 + AO353_22070 0.72 -1.3 4,832,973 - +1.3 4,832,981 - +0.8 4,833,003 + -0.5 4,833,021 + -0.2 4,833,021 + -1.4 4,833,021 + +1.0 4,833,021 + +1.0 4,833,021 + -1.7 4,833,021 + -0.2 4,833,021 + +0.7 4,833,022 - +0.2 4,833,022 - -0.3 4,833,022 - -1.5 4,833,022 - +0.1 4,833,024 + +0.2 4,833,024 + -0.2 4,833,024 + +1.8 4,833,024 + +0.4 4,833,024 + +0.3 4,833,025 - -0.3 4,833,025 - -0.8 4,833,025 - +0.8 4,833,025 - -1.0 4,833,047 + -1.1 4,833,047 + -1.8 4,833,047 + -2.7 4,833,047 + +0.5 4,833,047 + +0.3 4,833,047 + -1.4 4,833,047 + +1.5 4,833,048 - -0.2 4,833,048 - -0.8 4,833,048 - +0.5 4,833,048 - -0.8 4,833,048 - +2.1 4,833,048 - +0.3 4,833,048 - -2.0 4,833,048 - +0.2 4,833,048 - -1.0 4,833,048 - -2.0 4,833,048 - -2.2 4,833,048 - -0.0 4,833,064 - -0.4 4,833,064 - -1.0 4,833,153 + AO353_22075 0.10 +1.1 4,833,153 + AO353_22075 0.10 -0.7 4,833,377 + AO353_22075 0.45 -1.7 4,833,378 - AO353_22075 0.45 -0.9 4,833,378 - AO353_22075 0.45 +1.6 4,833,378 - AO353_22075 0.45 +0.5 4,833,416 + AO353_22075 0.51 +1.8 4,833,417 - AO353_22075 0.51 +0.2 4,833,497 + AO353_22075 0.64 -1.4 4,833,497 + AO353_22075 0.64 +1.8 4,833,498 - AO353_22075 0.64 -0.2 4,833,498 - AO353_22075 0.64 -0.3 4,833,498 - AO353_22075 0.64 -0.9 4,833,511 + AO353_22075 0.66 +0.5 4,833,697 + -1.0 4,833,697 + +0.2 4,833,740 + +0.2 4,833,740 + +0.3 4,833,741 - +0.1 4,833,816 + +0.8 4,833,816 + +1.8 4,833,816 + -1.3 4,833,817 - -0.3 4,833,960 + AO353_22080 0.13 -2.4 4,833,960 + AO353_22080 0.13 +0.2
Or see this region's nucleotide sequence