Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16595 and AO353_16600 overlap by 13 nucleotides AO353_16600 and AO353_16605 overlap by 1 nucleotides AO353_16605 and AO353_16610 are separated by 211 nucleotides
AO353_16595: AO353_16595 - pseudouridine synthase, at 3,686,273 to 3,687,331
_16595
AO353_16600: AO353_16600 - stationary phase survival protein SurE, at 3,687,319 to 3,688,068
_16600
AO353_16605: AO353_16605 - protein-L-isoaspartate O-methyltransferase, at 3,688,068 to 3,688,745
_16605
AO353_16610: AO353_16610 - peptigoglycan-binding protein LysM, at 3,688,957 to 3,689,814
_16610
Position (kb)
3688
3689 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3687.267 kb on + strand at 3687.267 kb on + strand at 3687.267 kb on + strand at 3687.267 kb on + strand at 3687.324 kb on + strand at 3687.325 kb on - strand at 3687.325 kb on - strand at 3687.325 kb on - strand at 3687.325 kb on - strand at 3687.325 kb on - strand at 3687.325 kb on - strand at 3687.394 kb on + strand, within AO353_16600 at 3687.394 kb on + strand, within AO353_16600 at 3687.394 kb on + strand, within AO353_16600 at 3687.394 kb on + strand, within AO353_16600 at 3687.499 kb on - strand, within AO353_16600 at 3687.506 kb on + strand, within AO353_16600 at 3687.506 kb on + strand, within AO353_16600 at 3687.506 kb on + strand, within AO353_16600 at 3687.507 kb on - strand, within AO353_16600 at 3687.507 kb on - strand, within AO353_16600 at 3687.507 kb on - strand, within AO353_16600 at 3687.507 kb on - strand, within AO353_16600 at 3687.570 kb on + strand, within AO353_16600 at 3687.571 kb on - strand, within AO353_16600 at 3687.622 kb on + strand, within AO353_16600 at 3687.622 kb on + strand, within AO353_16600 at 3687.622 kb on + strand, within AO353_16600 at 3687.623 kb on - strand, within AO353_16600 at 3687.623 kb on - strand, within AO353_16600 at 3687.623 kb on - strand, within AO353_16600 at 3687.623 kb on - strand, within AO353_16600 at 3687.727 kb on + strand, within AO353_16600 at 3687.728 kb on - strand, within AO353_16600 at 3687.728 kb on - strand, within AO353_16600 at 3687.754 kb on + strand, within AO353_16600 at 3687.754 kb on + strand, within AO353_16600 at 3687.755 kb on - strand, within AO353_16600 at 3687.755 kb on - strand, within AO353_16600 at 3687.755 kb on - strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.822 kb on + strand, within AO353_16600 at 3687.823 kb on - strand, within AO353_16600 at 3687.823 kb on - strand, within AO353_16600 at 3687.971 kb on + strand, within AO353_16600 at 3687.982 kb on + strand, within AO353_16600 at 3687.982 kb on + strand, within AO353_16600 at 3687.982 kb on + strand, within AO353_16600 at 3687.982 kb on + strand, within AO353_16600 at 3687.982 kb on + strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3687.983 kb on - strand, within AO353_16600 at 3688.015 kb on - strand at 3688.150 kb on + strand, within AO353_16605 at 3688.150 kb on + strand, within AO353_16605 at 3688.150 kb on + strand, within AO353_16605 at 3688.150 kb on + strand, within AO353_16605 at 3688.150 kb on + strand, within AO353_16605 at 3688.150 kb on + strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.151 kb on - strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.152 kb on + strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.153 kb on - strand, within AO353_16605 at 3688.245 kb on + strand, within AO353_16605 at 3688.245 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.296 kb on + strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.297 kb on - strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.298 kb on + strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.299 kb on - strand, within AO353_16605 at 3688.492 kb on + strand, within AO353_16605 at 3688.492 kb on + strand, within AO353_16605 at 3688.492 kb on + strand, within AO353_16605 at 3688.493 kb on - strand, within AO353_16605 at 3688.493 kb on - strand, within AO353_16605 at 3688.493 kb on - strand, within AO353_16605 at 3688.493 kb on - strand, within AO353_16605 at 3688.493 kb on - strand, within AO353_16605 at 3688.539 kb on + strand, within AO353_16605 at 3688.539 kb on + strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.540 kb on - strand, within AO353_16605 at 3688.551 kb on - strand, within AO353_16605 at 3688.576 kb on + strand, within AO353_16605 at 3688.576 kb on + strand, within AO353_16605 at 3688.576 kb on + strand, within AO353_16605 at 3688.576 kb on + strand, within AO353_16605 at 3688.576 kb on + strand, within AO353_16605 at 3688.577 kb on - strand, within AO353_16605 at 3688.577 kb on - strand, within AO353_16605 at 3688.577 kb on - strand, within AO353_16605 at 3688.717 kb on + strand at 3688.718 kb on - strand at 3688.718 kb on - strand at 3688.743 kb on + strand at 3688.743 kb on + strand at 3688.744 kb on - strand at 3688.751 kb on + strand at 3688.751 kb on + strand at 3688.751 kb on + strand at 3688.751 kb on + strand at 3688.752 kb on - strand at 3688.771 kb on + strand at 3688.779 kb on + strand at 3688.779 kb on + strand at 3688.780 kb on - strand at 3688.780 kb on - strand at 3688.790 kb on + strand at 3688.791 kb on - strand at 3688.889 kb on + strand at 3688.889 kb on + strand at 3688.889 kb on + strand at 3688.890 kb on - strand at 3688.890 kb on - strand at 3688.890 kb on - strand at 3688.890 kb on - strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.891 kb on + strand at 3688.892 kb on - strand at 3688.915 kb on + strand at 3688.927 kb on + strand at 3688.989 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,687,267 + -0.8 3,687,267 + -1.0 3,687,267 + +0.2 3,687,267 + +0.9 3,687,324 + -0.5 3,687,325 - -0.8 3,687,325 - -0.7 3,687,325 - +0.3 3,687,325 - -0.9 3,687,325 - -0.8 3,687,325 - -1.1 3,687,394 + AO353_16600 0.10 -1.4 3,687,394 + AO353_16600 0.10 -1.5 3,687,394 + AO353_16600 0.10 +0.0 3,687,394 + AO353_16600 0.10 +0.4 3,687,499 - AO353_16600 0.24 -1.0 3,687,506 + AO353_16600 0.25 +1.2 3,687,506 + AO353_16600 0.25 +0.5 3,687,506 + AO353_16600 0.25 +1.3 3,687,507 - AO353_16600 0.25 -0.7 3,687,507 - AO353_16600 0.25 -1.2 3,687,507 - AO353_16600 0.25 -0.7 3,687,507 - AO353_16600 0.25 -1.2 3,687,570 + AO353_16600 0.33 +0.0 3,687,571 - AO353_16600 0.34 -1.2 3,687,622 + AO353_16600 0.40 +1.0 3,687,622 + AO353_16600 0.40 +0.4 3,687,622 + AO353_16600 0.40 +0.8 3,687,623 - AO353_16600 0.41 -0.9 3,687,623 - AO353_16600 0.41 -1.7 3,687,623 - AO353_16600 0.41 +0.3 3,687,623 - AO353_16600 0.41 -0.2 3,687,727 + AO353_16600 0.54 -0.6 3,687,728 - AO353_16600 0.55 +0.3 3,687,728 - AO353_16600 0.55 +1.8 3,687,754 + AO353_16600 0.58 +0.6 3,687,754 + AO353_16600 0.58 -0.8 3,687,755 - AO353_16600 0.58 +0.8 3,687,755 - AO353_16600 0.58 +0.0 3,687,755 - AO353_16600 0.58 -1.2 3,687,822 + AO353_16600 0.67 +1.0 3,687,822 + AO353_16600 0.67 -0.2 3,687,822 + AO353_16600 0.67 -1.6 3,687,822 + AO353_16600 0.67 -1.2 3,687,822 + AO353_16600 0.67 -0.2 3,687,822 + AO353_16600 0.67 -1.4 3,687,822 + AO353_16600 0.67 +0.9 3,687,823 - AO353_16600 0.67 +0.8 3,687,823 - AO353_16600 0.67 -1.6 3,687,971 + AO353_16600 0.87 -0.1 3,687,982 + AO353_16600 0.88 -0.2 3,687,982 + AO353_16600 0.88 -0.4 3,687,982 + AO353_16600 0.88 +1.3 3,687,982 + AO353_16600 0.88 +0.8 3,687,982 + AO353_16600 0.88 -0.9 3,687,983 - AO353_16600 0.89 -0.4 3,687,983 - AO353_16600 0.89 -0.7 3,687,983 - AO353_16600 0.89 -1.1 3,687,983 - AO353_16600 0.89 +0.5 3,687,983 - AO353_16600 0.89 -1.0 3,687,983 - AO353_16600 0.89 -1.2 3,687,983 - AO353_16600 0.89 -0.7 3,687,983 - AO353_16600 0.89 -0.1 3,687,983 - AO353_16600 0.89 -0.7 3,687,983 - AO353_16600 0.89 -1.9 3,688,015 - -0.5 3,688,150 + AO353_16605 0.12 -1.3 3,688,150 + AO353_16605 0.12 -1.2 3,688,150 + AO353_16605 0.12 +0.5 3,688,150 + AO353_16605 0.12 +1.8 3,688,150 + AO353_16605 0.12 -0.8 3,688,150 + AO353_16605 0.12 -0.8 3,688,151 - AO353_16605 0.12 -0.9 3,688,151 - AO353_16605 0.12 -1.6 3,688,151 - AO353_16605 0.12 +0.8 3,688,151 - AO353_16605 0.12 +1.3 3,688,151 - AO353_16605 0.12 -1.9 3,688,151 - AO353_16605 0.12 +1.3 3,688,151 - AO353_16605 0.12 -1.5 3,688,151 - AO353_16605 0.12 -1.5 3,688,151 - AO353_16605 0.12 +0.3 3,688,152 + AO353_16605 0.12 -1.2 3,688,152 + AO353_16605 0.12 -1.7 3,688,152 + AO353_16605 0.12 -1.5 3,688,152 + AO353_16605 0.12 +0.3 3,688,152 + AO353_16605 0.12 -0.7 3,688,152 + AO353_16605 0.12 -0.7 3,688,152 + AO353_16605 0.12 -0.2 3,688,153 - AO353_16605 0.13 +1.7 3,688,153 - AO353_16605 0.13 +0.3 3,688,153 - AO353_16605 0.13 -0.2 3,688,153 - AO353_16605 0.13 -0.6 3,688,153 - AO353_16605 0.13 +0.9 3,688,153 - AO353_16605 0.13 -1.4 3,688,153 - AO353_16605 0.13 -0.5 3,688,153 - AO353_16605 0.13 -0.8 3,688,153 - AO353_16605 0.13 +0.0 3,688,153 - AO353_16605 0.13 +0.5 3,688,153 - AO353_16605 0.13 -0.9 3,688,245 + AO353_16605 0.26 -1.0 3,688,245 + AO353_16605 0.26 +1.3 3,688,296 + AO353_16605 0.34 +0.1 3,688,296 + AO353_16605 0.34 -1.0 3,688,296 + AO353_16605 0.34 -0.5 3,688,296 + AO353_16605 0.34 -1.4 3,688,296 + AO353_16605 0.34 +0.0 3,688,296 + AO353_16605 0.34 +1.0 3,688,296 + AO353_16605 0.34 -1.5 3,688,296 + AO353_16605 0.34 -1.0 3,688,296 + AO353_16605 0.34 +0.5 3,688,296 + AO353_16605 0.34 -0.5 3,688,296 + AO353_16605 0.34 +1.3 3,688,296 + AO353_16605 0.34 -0.2 3,688,296 + AO353_16605 0.34 -2.2 3,688,296 + AO353_16605 0.34 -0.6 3,688,296 + AO353_16605 0.34 +0.0 3,688,296 + AO353_16605 0.34 -1.0 3,688,296 + AO353_16605 0.34 -0.2 3,688,297 - AO353_16605 0.34 -0.5 3,688,297 - AO353_16605 0.34 -2.1 3,688,297 - AO353_16605 0.34 -0.7 3,688,297 - AO353_16605 0.34 +0.3 3,688,297 - AO353_16605 0.34 -1.0 3,688,297 - AO353_16605 0.34 +0.5 3,688,297 - AO353_16605 0.34 -0.2 3,688,297 - AO353_16605 0.34 +1.1 3,688,297 - AO353_16605 0.34 +0.0 3,688,297 - AO353_16605 0.34 -1.4 3,688,297 - AO353_16605 0.34 -1.7 3,688,298 + AO353_16605 0.34 +0.3 3,688,298 + AO353_16605 0.34 +1.0 3,688,298 + AO353_16605 0.34 -1.5 3,688,298 + AO353_16605 0.34 +0.5 3,688,298 + AO353_16605 0.34 +0.4 3,688,298 + AO353_16605 0.34 -2.2 3,688,298 + AO353_16605 0.34 -2.3 3,688,298 + AO353_16605 0.34 +0.9 3,688,298 + AO353_16605 0.34 -2.6 3,688,298 + AO353_16605 0.34 +0.4 3,688,298 + AO353_16605 0.34 +1.3 3,688,298 + AO353_16605 0.34 +0.8 3,688,298 + AO353_16605 0.34 -1.2 3,688,298 + AO353_16605 0.34 -0.1 3,688,299 - AO353_16605 0.34 +0.3 3,688,299 - AO353_16605 0.34 -1.1 3,688,299 - AO353_16605 0.34 -2.8 3,688,299 - AO353_16605 0.34 -0.6 3,688,299 - AO353_16605 0.34 +2.3 3,688,299 - AO353_16605 0.34 -0.3 3,688,299 - AO353_16605 0.34 -1.3 3,688,299 - AO353_16605 0.34 -1.5 3,688,299 - AO353_16605 0.34 +1.0 3,688,299 - AO353_16605 0.34 -0.1 3,688,299 - AO353_16605 0.34 -0.1 3,688,299 - AO353_16605 0.34 -2.1 3,688,299 - AO353_16605 0.34 -1.0 3,688,299 - AO353_16605 0.34 -0.7 3,688,299 - AO353_16605 0.34 -1.1 3,688,299 - AO353_16605 0.34 +0.0 3,688,299 - AO353_16605 0.34 -0.4 3,688,299 - AO353_16605 0.34 -0.2 3,688,492 + AO353_16605 0.63 +0.0 3,688,492 + AO353_16605 0.63 +0.6 3,688,492 + AO353_16605 0.63 +0.8 3,688,493 - AO353_16605 0.63 -1.1 3,688,493 - AO353_16605 0.63 +2.0 3,688,493 - AO353_16605 0.63 -1.3 3,688,493 - AO353_16605 0.63 +0.0 3,688,493 - AO353_16605 0.63 -2.2 3,688,539 + AO353_16605 0.69 -0.6 3,688,539 + AO353_16605 0.69 -0.2 3,688,540 - AO353_16605 0.70 +1.0 3,688,540 - AO353_16605 0.70 +0.2 3,688,540 - AO353_16605 0.70 -1.0 3,688,540 - AO353_16605 0.70 -0.9 3,688,540 - AO353_16605 0.70 -1.0 3,688,540 - AO353_16605 0.70 -0.7 3,688,551 - AO353_16605 0.71 -0.6 3,688,576 + AO353_16605 0.75 -0.9 3,688,576 + AO353_16605 0.75 +0.0 3,688,576 + AO353_16605 0.75 +1.1 3,688,576 + AO353_16605 0.75 -0.2 3,688,576 + AO353_16605 0.75 +0.8 3,688,577 - AO353_16605 0.75 -0.5 3,688,577 - AO353_16605 0.75 +0.3 3,688,577 - AO353_16605 0.75 -0.5 3,688,717 + -1.5 3,688,718 - -0.5 3,688,718 - -0.4 3,688,743 + +0.2 3,688,743 + -1.4 3,688,744 - -0.7 3,688,751 + +0.3 3,688,751 + +0.5 3,688,751 + -2.2 3,688,751 + +2.3 3,688,752 - -1.3 3,688,771 + +0.2 3,688,779 + -1.2 3,688,779 + -2.1 3,688,780 - -1.1 3,688,780 - +0.4 3,688,790 + +0.2 3,688,791 - -0.7 3,688,889 + +2.3 3,688,889 + +0.0 3,688,889 + +0.9 3,688,890 - +0.9 3,688,890 - -1.0 3,688,890 - +0.3 3,688,890 - +0.2 3,688,891 + -0.1 3,688,891 + -1.4 3,688,891 + -0.5 3,688,891 + +2.3 3,688,891 + -0.7 3,688,891 + +0.5 3,688,891 + -0.1 3,688,891 + +2.3 3,688,891 + -0.7 3,688,891 + +0.4 3,688,891 + -1.1 3,688,891 + -1.3 3,688,891 + +0.3 3,688,891 + +1.2 3,688,891 + +0.3 3,688,892 - -1.2 3,688,915 + -0.7 3,688,927 + -1.6 3,688,989 + -0.5
Or see this region's nucleotide sequence