Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16065 and AO353_16070 overlap by 4 nucleotides
AO353_16065: AO353_16065 - FAD-binding protein, at 3,554,952 to 3,555,737
_16065
AO353_16070: AO353_16070 - PadR family transcriptional regulator, at 3,555,734 to 3,556,312
_16070
Position (kb)
3554
3555
3556 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3554.318 kb on + strand at 3554.350 kb on - strand at 3554.350 kb on - strand at 3554.350 kb on - strand at 3554.350 kb on - strand at 3554.688 kb on + strand at 3554.953 kb on + strand at 3554.953 kb on + strand at 3555.082 kb on + strand, within AO353_16065 at 3555.082 kb on + strand, within AO353_16065 at 3555.082 kb on + strand, within AO353_16065 at 3555.082 kb on + strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.083 kb on - strand, within AO353_16065 at 3555.307 kb on + strand, within AO353_16065 at 3555.307 kb on + strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.308 kb on - strand, within AO353_16065 at 3555.420 kb on + strand, within AO353_16065 at 3555.420 kb on + strand, within AO353_16065 at 3555.420 kb on + strand, within AO353_16065 at 3555.420 kb on + strand, within AO353_16065 at 3555.421 kb on - strand, within AO353_16065 at 3555.421 kb on - strand, within AO353_16065 at 3555.421 kb on - strand, within AO353_16065 at 3555.472 kb on + strand, within AO353_16065 at 3555.473 kb on - strand, within AO353_16065 at 3555.473 kb on - strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.573 kb on + strand, within AO353_16065 at 3555.574 kb on - strand, within AO353_16065 at 3555.574 kb on - strand, within AO353_16065 at 3555.574 kb on - strand, within AO353_16065 at 3555.574 kb on - strand, within AO353_16065 at 3555.980 kb on + strand, within AO353_16070 at 3556.011 kb on + strand, within AO353_16070 at 3556.012 kb on - strand, within AO353_16070 at 3556.012 kb on - strand, within AO353_16070 at 3556.012 kb on - strand, within AO353_16070 at 3556.012 kb on - strand, within AO353_16070 at 3556.080 kb on + strand, within AO353_16070 at 3556.080 kb on + strand, within AO353_16070 at 3556.081 kb on - strand, within AO353_16070 at 3556.081 kb on - strand, within AO353_16070 at 3556.104 kb on + strand, within AO353_16070 at 3556.146 kb on + strand, within AO353_16070 at 3556.338 kb on - strand at 3556.361 kb on - strand at 3556.421 kb on - strand at 3556.466 kb on - strand at 3556.519 kb on + strand at 3556.524 kb on - strand at 3556.591 kb on + strand at 3556.592 kb on - strand at 3556.606 kb on - strand at 3556.663 kb on - strand at 3556.665 kb on + strand at 3556.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,554,318 + +1.7 3,554,350 - +0.8 3,554,350 - +0.9 3,554,350 - +1.0 3,554,350 - -0.5 3,554,688 + -1.2 3,554,953 + -0.8 3,554,953 + -0.2 3,555,082 + AO353_16065 0.17 -0.2 3,555,082 + AO353_16065 0.17 -0.6 3,555,082 + AO353_16065 0.17 +0.0 3,555,082 + AO353_16065 0.17 +0.1 3,555,083 - AO353_16065 0.17 +0.6 3,555,083 - AO353_16065 0.17 +1.0 3,555,083 - AO353_16065 0.17 +0.3 3,555,083 - AO353_16065 0.17 +0.0 3,555,083 - AO353_16065 0.17 -0.6 3,555,083 - AO353_16065 0.17 -0.3 3,555,083 - AO353_16065 0.17 -0.7 3,555,083 - AO353_16065 0.17 -1.5 3,555,083 - AO353_16065 0.17 +0.4 3,555,083 - AO353_16065 0.17 +3.0 3,555,307 + AO353_16065 0.45 +0.4 3,555,307 + AO353_16065 0.45 -1.1 3,555,308 - AO353_16065 0.45 -1.3 3,555,308 - AO353_16065 0.45 -1.3 3,555,308 - AO353_16065 0.45 +1.4 3,555,308 - AO353_16065 0.45 -1.1 3,555,308 - AO353_16065 0.45 +0.5 3,555,308 - AO353_16065 0.45 -0.8 3,555,420 + AO353_16065 0.60 +0.6 3,555,420 + AO353_16065 0.60 +1.0 3,555,420 + AO353_16065 0.60 -0.2 3,555,420 + AO353_16065 0.60 +1.6 3,555,421 - AO353_16065 0.60 +2.0 3,555,421 - AO353_16065 0.60 -0.1 3,555,421 - AO353_16065 0.60 +0.8 3,555,472 + AO353_16065 0.66 -0.4 3,555,473 - AO353_16065 0.66 -0.4 3,555,473 - AO353_16065 0.66 -0.4 3,555,573 + AO353_16065 0.79 -1.2 3,555,573 + AO353_16065 0.79 -1.2 3,555,573 + AO353_16065 0.79 +0.3 3,555,573 + AO353_16065 0.79 +0.8 3,555,573 + AO353_16065 0.79 -0.6 3,555,573 + AO353_16065 0.79 +0.7 3,555,574 - AO353_16065 0.79 +0.4 3,555,574 - AO353_16065 0.79 -1.2 3,555,574 - AO353_16065 0.79 +2.7 3,555,574 - AO353_16065 0.79 +1.4 3,555,980 + AO353_16070 0.42 -0.7 3,556,011 + AO353_16070 0.48 +0.3 3,556,012 - AO353_16070 0.48 -0.0 3,556,012 - AO353_16070 0.48 +0.4 3,556,012 - AO353_16070 0.48 +0.6 3,556,012 - AO353_16070 0.48 +0.6 3,556,080 + AO353_16070 0.60 +0.0 3,556,080 + AO353_16070 0.60 +0.0 3,556,081 - AO353_16070 0.60 +1.1 3,556,081 - AO353_16070 0.60 +0.4 3,556,104 + AO353_16070 0.64 -0.9 3,556,146 + AO353_16070 0.71 +0.7 3,556,338 - -1.0 3,556,361 - -0.4 3,556,421 - -0.4 3,556,466 - +0.8 3,556,519 + -1.2 3,556,524 - +0.4 3,556,591 + +0.0 3,556,592 - +0.5 3,556,606 - -0.4 3,556,663 - +1.7 3,556,665 + -0.8 3,556,688 - -0.1
Or see this region's nucleotide sequence