Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14670 and AO353_14675 are separated by 190 nucleotides AO353_14675 and AO353_14680 are separated by 123 nucleotides AO353_14680 and AO353_14685 are separated by 116 nucleotides
AO353_14670: AO353_14670 - gamma-glutamyltransferase, at 3,249,235 to 3,251,079
_14670
AO353_14675: AO353_14675 - hypothetical protein, at 3,251,270 to 3,252,373
_14675
AO353_14680: AO353_14680 - tRNA-Met, at 3,252,497 to 3,252,573
_14680
AO353_14685: AO353_14685 - chemotaxis protein, at 3,252,690 to 3,254,747
_14685
Position (kb)
3251
3252
3253 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.427 kb on + strand, within AO353_14670 at 3250.427 kb on + strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.479 kb on + strand, within AO353_14670 at 3250.479 kb on + strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.910 kb on + strand at 3250.911 kb on - strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.213 kb on - strand at 3251.213 kb on - strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.253 kb on - strand at 3251.486 kb on + strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.715 kb on + strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.837 kb on + strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.952 kb on - strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3252.020 kb on + strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.098 kb on + strand, within AO353_14675 at 3252.099 kb on - strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.115 kb on - strand, within AO353_14675 at 3252.115 kb on - strand, within AO353_14675 at 3252.170 kb on + strand, within AO353_14675 at 3252.171 kb on - strand, within AO353_14675 at 3252.284 kb on + strand at 3252.284 kb on + strand at 3252.336 kb on + strand at 3252.337 kb on - strand at 3252.337 kb on - strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.370 kb on - strand at 3252.370 kb on - strand at 3252.371 kb on + strand at 3252.371 kb on + strand at 3252.371 kb on + strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.456 kb on + strand at 3252.457 kb on - strand at 3252.457 kb on - strand at 3252.637 kb on - strand at 3252.724 kb on - strand at 3252.724 kb on - strand at 3252.724 kb on - strand at 3252.858 kb on + strand at 3252.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,250,319 + AO353_14670 0.59 +0.7 3,250,319 + AO353_14670 0.59 +0.5 3,250,319 + AO353_14670 0.59 -0.1 3,250,319 + AO353_14670 0.59 +2.5 3,250,319 + AO353_14670 0.59 -1.6 3,250,319 + AO353_14670 0.59 -0.4 3,250,319 + AO353_14670 0.59 +0.5 3,250,319 + AO353_14670 0.59 +0.3 3,250,319 + AO353_14670 0.59 +0.1 3,250,319 + AO353_14670 0.59 +1.7 3,250,320 - AO353_14670 0.59 +0.2 3,250,320 - AO353_14670 0.59 -0.1 3,250,320 - AO353_14670 0.59 -0.8 3,250,320 - AO353_14670 0.59 -1.0 3,250,320 - AO353_14670 0.59 +0.3 3,250,320 - AO353_14670 0.59 -1.8 3,250,320 - AO353_14670 0.59 -0.1 3,250,320 - AO353_14670 0.59 +0.3 3,250,389 + AO353_14670 0.63 +0.8 3,250,389 + AO353_14670 0.63 +0.1 3,250,389 + AO353_14670 0.63 -0.9 3,250,389 + AO353_14670 0.63 +0.1 3,250,389 + AO353_14670 0.63 +1.2 3,250,389 + AO353_14670 0.63 -0.1 3,250,390 - AO353_14670 0.63 -0.5 3,250,390 - AO353_14670 0.63 +0.4 3,250,390 - AO353_14670 0.63 -0.4 3,250,390 - AO353_14670 0.63 -0.1 3,250,390 - AO353_14670 0.63 +0.1 3,250,390 - AO353_14670 0.63 -1.7 3,250,427 + AO353_14670 0.65 -0.1 3,250,427 + AO353_14670 0.65 -0.6 3,250,428 - AO353_14670 0.65 +1.6 3,250,428 - AO353_14670 0.65 -0.6 3,250,428 - AO353_14670 0.65 -0.1 3,250,428 - AO353_14670 0.65 +1.1 3,250,428 - AO353_14670 0.65 -0.2 3,250,428 - AO353_14670 0.65 -0.9 3,250,428 - AO353_14670 0.65 +0.7 3,250,479 + AO353_14670 0.67 +0.6 3,250,479 + AO353_14670 0.67 +1.1 3,250,480 - AO353_14670 0.67 +0.9 3,250,480 - AO353_14670 0.67 +1.6 3,250,480 - AO353_14670 0.67 +1.9 3,250,480 - AO353_14670 0.67 -1.2 3,250,480 - AO353_14670 0.67 +0.9 3,250,480 - AO353_14670 0.67 -0.1 3,250,480 - AO353_14670 0.67 -1.0 3,250,480 - AO353_14670 0.67 -1.7 3,250,715 + AO353_14670 0.80 -1.1 3,250,715 + AO353_14670 0.80 +1.5 3,250,715 + AO353_14670 0.80 -0.2 3,250,716 - AO353_14670 0.80 +0.6 3,250,716 - AO353_14670 0.80 +0.5 3,250,716 - AO353_14670 0.80 -0.9 3,250,910 + -1.1 3,250,911 - +0.8 3,251,120 + +1.2 3,251,120 + -0.9 3,251,120 + +0.1 3,251,120 + -0.6 3,251,120 + +0.2 3,251,120 + +0.7 3,251,121 - +0.5 3,251,121 - +0.9 3,251,121 - -0.5 3,251,121 - -0.4 3,251,121 - +0.9 3,251,121 - +1.0 3,251,121 - +0.5 3,251,121 - -0.9 3,251,213 - -1.1 3,251,213 - -0.5 3,251,227 + +0.3 3,251,227 + -0.0 3,251,227 + -1.0 3,251,227 + +0.6 3,251,227 + +0.5 3,251,227 + -1.5 3,251,253 - +0.8 3,251,486 + AO353_14675 0.20 -1.4 3,251,487 - AO353_14675 0.20 -1.5 3,251,487 - AO353_14675 0.20 -1.0 3,251,487 - AO353_14675 0.20 -1.2 3,251,678 + AO353_14675 0.37 +0.3 3,251,678 + AO353_14675 0.37 -1.6 3,251,678 + AO353_14675 0.37 -0.4 3,251,678 + AO353_14675 0.37 -0.9 3,251,679 - AO353_14675 0.37 -0.7 3,251,679 - AO353_14675 0.37 -0.2 3,251,699 + AO353_14675 0.39 -0.7 3,251,699 + AO353_14675 0.39 -0.3 3,251,699 + AO353_14675 0.39 -1.6 3,251,699 + AO353_14675 0.39 -0.9 3,251,699 + AO353_14675 0.39 +1.6 3,251,700 - AO353_14675 0.39 +1.2 3,251,700 - AO353_14675 0.39 -0.9 3,251,700 - AO353_14675 0.39 -0.0 3,251,700 - AO353_14675 0.39 +0.1 3,251,715 + AO353_14675 0.40 -0.5 3,251,716 - AO353_14675 0.40 +0.8 3,251,716 - AO353_14675 0.40 +0.9 3,251,716 - AO353_14675 0.40 +0.9 3,251,763 + AO353_14675 0.45 -0.4 3,251,763 + AO353_14675 0.45 -1.0 3,251,763 + AO353_14675 0.45 +1.1 3,251,764 - AO353_14675 0.45 +0.6 3,251,764 - AO353_14675 0.45 -0.4 3,251,764 - AO353_14675 0.45 -0.1 3,251,764 - AO353_14675 0.45 +0.3 3,251,837 + AO353_14675 0.51 +0.6 3,251,838 - AO353_14675 0.51 -0.2 3,251,838 - AO353_14675 0.51 +0.6 3,251,951 + AO353_14675 0.62 -0.4 3,251,951 + AO353_14675 0.62 +0.8 3,251,952 - AO353_14675 0.62 +0.1 3,251,990 + AO353_14675 0.65 -1.4 3,251,990 + AO353_14675 0.65 +0.5 3,251,991 - AO353_14675 0.65 +0.9 3,251,991 - AO353_14675 0.65 -1.0 3,252,020 + AO353_14675 0.68 +1.5 3,252,021 - AO353_14675 0.68 +0.3 3,252,021 - AO353_14675 0.68 -0.7 3,252,035 + AO353_14675 0.69 -0.0 3,252,035 + AO353_14675 0.69 -0.4 3,252,035 + AO353_14675 0.69 +0.1 3,252,036 - AO353_14675 0.69 -0.2 3,252,036 - AO353_14675 0.69 +1.5 3,252,036 - AO353_14675 0.69 +0.9 3,252,036 - AO353_14675 0.69 +0.1 3,252,036 - AO353_14675 0.69 +0.7 3,252,036 - AO353_14675 0.69 +0.0 3,252,098 + AO353_14675 0.75 -1.1 3,252,099 - AO353_14675 0.75 -0.7 3,252,114 + AO353_14675 0.76 +2.1 3,252,114 + AO353_14675 0.76 -0.7 3,252,114 + AO353_14675 0.76 +0.5 3,252,114 + AO353_14675 0.76 +0.6 3,252,115 - AO353_14675 0.77 +0.9 3,252,115 - AO353_14675 0.77 -0.9 3,252,170 + AO353_14675 0.82 -0.9 3,252,171 - AO353_14675 0.82 +0.4 3,252,284 + -0.7 3,252,284 + -1.6 3,252,336 + +0.6 3,252,337 - -0.7 3,252,337 - -0.4 3,252,369 + -0.9 3,252,369 + -1.9 3,252,369 + +0.5 3,252,369 + +0.7 3,252,369 + +0.9 3,252,370 - +0.6 3,252,370 - +0.6 3,252,371 + -0.9 3,252,371 + +1.7 3,252,371 + +1.7 3,252,372 - +1.3 3,252,372 - -0.1 3,252,372 - -1.4 3,252,372 - +1.5 3,252,456 + +0.1 3,252,457 - +0.2 3,252,457 - -1.1 3,252,637 - -1.1 3,252,724 - -0.1 3,252,724 - +1.2 3,252,724 - -0.2 3,252,858 + -1.8 3,252,859 - +1.2
Or see this region's nucleotide sequence