Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14665 and AO353_14670 are separated by 46 nucleotides AO353_14670 and AO353_14675 are separated by 190 nucleotides
AO353_14665: AO353_14665 - alpha/beta hydrolase, at 3,248,355 to 3,249,188
_14665
AO353_14670: AO353_14670 - gamma-glutamyltransferase, at 3,249,235 to 3,251,079
_14670
AO353_14675: AO353_14675 - hypothetical protein, at 3,251,270 to 3,252,373
_14675
Position (kb)
3249
3250
3251
3252 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3248.237 kb on + strand at 3248.237 kb on + strand at 3248.237 kb on + strand at 3248.237 kb on + strand at 3248.237 kb on + strand at 3248.237 kb on + strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.238 kb on - strand at 3248.282 kb on + strand at 3248.283 kb on - strand at 3248.283 kb on - strand at 3248.288 kb on + strand at 3248.288 kb on + strand at 3248.288 kb on + strand at 3248.288 kb on + strand at 3248.289 kb on - strand at 3248.289 kb on - strand at 3248.289 kb on - strand at 3248.476 kb on + strand, within AO353_14665 at 3248.476 kb on + strand, within AO353_14665 at 3248.477 kb on - strand, within AO353_14665 at 3248.477 kb on - strand, within AO353_14665 at 3248.477 kb on - strand, within AO353_14665 at 3248.484 kb on - strand, within AO353_14665 at 3248.510 kb on + strand, within AO353_14665 at 3248.510 kb on + strand, within AO353_14665 at 3248.511 kb on - strand, within AO353_14665 at 3248.511 kb on - strand, within AO353_14665 at 3248.511 kb on - strand, within AO353_14665 at 3248.550 kb on + strand, within AO353_14665 at 3248.550 kb on + strand, within AO353_14665 at 3248.551 kb on - strand, within AO353_14665 at 3248.664 kb on + strand, within AO353_14665 at 3248.664 kb on + strand, within AO353_14665 at 3248.664 kb on + strand, within AO353_14665 at 3248.665 kb on - strand, within AO353_14665 at 3248.665 kb on - strand, within AO353_14665 at 3248.693 kb on + strand, within AO353_14665 at 3248.694 kb on - strand, within AO353_14665 at 3249.031 kb on + strand, within AO353_14665 at 3249.054 kb on + strand, within AO353_14665 at 3249.055 kb on - strand, within AO353_14665 at 3249.136 kb on + strand at 3249.136 kb on + strand at 3249.137 kb on - strand at 3249.137 kb on - strand at 3249.137 kb on - strand at 3249.137 kb on - strand at 3249.137 kb on - strand at 3249.137 kb on - strand at 3249.186 kb on + strand at 3249.187 kb on - strand at 3249.360 kb on + strand at 3249.361 kb on - strand at 3249.361 kb on - strand at 3249.515 kb on + strand, within AO353_14670 at 3249.515 kb on + strand, within AO353_14670 at 3249.515 kb on + strand, within AO353_14670 at 3249.515 kb on + strand, within AO353_14670 at 3249.516 kb on - strand, within AO353_14670 at 3249.516 kb on - strand, within AO353_14670 at 3249.516 kb on - strand, within AO353_14670 at 3249.798 kb on + strand, within AO353_14670 at 3249.798 kb on + strand, within AO353_14670 at 3249.799 kb on - strand, within AO353_14670 at 3249.799 kb on - strand, within AO353_14670 at 3249.831 kb on - strand, within AO353_14670 at 3249.831 kb on - strand, within AO353_14670 at 3249.914 kb on + strand, within AO353_14670 at 3249.915 kb on - strand, within AO353_14670 at 3249.915 kb on - strand, within AO353_14670 at 3249.915 kb on - strand, within AO353_14670 at 3249.971 kb on + strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3249.972 kb on - strand, within AO353_14670 at 3250.196 kb on + strand, within AO353_14670 at 3250.196 kb on + strand, within AO353_14670 at 3250.196 kb on + strand, within AO353_14670 at 3250.196 kb on + strand, within AO353_14670 at 3250.197 kb on - strand, within AO353_14670 at 3250.197 kb on - strand, within AO353_14670 at 3250.197 kb on - strand, within AO353_14670 at 3250.197 kb on - strand, within AO353_14670 at 3250.232 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.319 kb on + strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.320 kb on - strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.389 kb on + strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.390 kb on - strand, within AO353_14670 at 3250.427 kb on + strand, within AO353_14670 at 3250.427 kb on + strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.428 kb on - strand, within AO353_14670 at 3250.479 kb on + strand, within AO353_14670 at 3250.479 kb on + strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.480 kb on - strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.715 kb on + strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.716 kb on - strand, within AO353_14670 at 3250.910 kb on + strand at 3250.911 kb on - strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.120 kb on + strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.121 kb on - strand at 3251.213 kb on - strand at 3251.213 kb on - strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.227 kb on + strand at 3251.253 kb on - strand at 3251.486 kb on + strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.487 kb on - strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.715 kb on + strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.837 kb on + strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.952 kb on - strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3252.020 kb on + strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,248,237 + +1.5 3,248,237 + +0.1 3,248,237 + -0.2 3,248,237 + -0.1 3,248,237 + -1.0 3,248,237 + -1.6 3,248,238 - -0.1 3,248,238 - +0.5 3,248,238 - +0.5 3,248,238 - +0.4 3,248,238 - +3.5 3,248,238 - -0.4 3,248,238 - +2.0 3,248,238 - -0.6 3,248,238 - +1.0 3,248,238 - -0.2 3,248,238 - -0.7 3,248,238 - -1.0 3,248,282 + -0.4 3,248,283 - +1.5 3,248,283 - +1.2 3,248,288 + +1.6 3,248,288 + +1.2 3,248,288 + +1.9 3,248,288 + -0.9 3,248,289 - +0.1 3,248,289 - -2.2 3,248,289 - +1.2 3,248,476 + AO353_14665 0.15 +0.3 3,248,476 + AO353_14665 0.15 -1.2 3,248,477 - AO353_14665 0.15 +1.1 3,248,477 - AO353_14665 0.15 -1.1 3,248,477 - AO353_14665 0.15 -1.0 3,248,484 - AO353_14665 0.15 +0.2 3,248,510 + AO353_14665 0.19 -0.7 3,248,510 + AO353_14665 0.19 -0.7 3,248,511 - AO353_14665 0.19 -1.1 3,248,511 - AO353_14665 0.19 -1.2 3,248,511 - AO353_14665 0.19 +0.1 3,248,550 + AO353_14665 0.23 +0.2 3,248,550 + AO353_14665 0.23 -0.9 3,248,551 - AO353_14665 0.24 +0.5 3,248,664 + AO353_14665 0.37 +0.5 3,248,664 + AO353_14665 0.37 -0.4 3,248,664 + AO353_14665 0.37 -0.5 3,248,665 - AO353_14665 0.37 -2.1 3,248,665 - AO353_14665 0.37 -0.7 3,248,693 + AO353_14665 0.41 -0.4 3,248,694 - AO353_14665 0.41 +0.5 3,249,031 + AO353_14665 0.81 -1.2 3,249,054 + AO353_14665 0.84 +0.1 3,249,055 - AO353_14665 0.84 +0.5 3,249,136 + -0.1 3,249,136 + -0.2 3,249,137 - -1.2 3,249,137 - -0.5 3,249,137 - -0.2 3,249,137 - +0.3 3,249,137 - -0.1 3,249,137 - -0.5 3,249,186 + +1.5 3,249,187 - -1.1 3,249,360 + -0.2 3,249,361 - +1.4 3,249,361 - -1.6 3,249,515 + AO353_14670 0.15 +0.7 3,249,515 + AO353_14670 0.15 -1.3 3,249,515 + AO353_14670 0.15 -0.1 3,249,515 + AO353_14670 0.15 -0.0 3,249,516 - AO353_14670 0.15 +0.1 3,249,516 - AO353_14670 0.15 +0.6 3,249,516 - AO353_14670 0.15 +0.5 3,249,798 + AO353_14670 0.31 -0.7 3,249,798 + AO353_14670 0.31 +0.1 3,249,799 - AO353_14670 0.31 +0.1 3,249,799 - AO353_14670 0.31 +0.8 3,249,831 - AO353_14670 0.32 +0.9 3,249,831 - AO353_14670 0.32 +0.3 3,249,914 + AO353_14670 0.37 +0.9 3,249,915 - AO353_14670 0.37 -1.1 3,249,915 - AO353_14670 0.37 +1.9 3,249,915 - AO353_14670 0.37 +0.4 3,249,971 + AO353_14670 0.40 -1.4 3,249,972 - AO353_14670 0.40 +0.9 3,249,972 - AO353_14670 0.40 +0.3 3,249,972 - AO353_14670 0.40 -1.4 3,249,972 - AO353_14670 0.40 -1.5 3,249,972 - AO353_14670 0.40 -0.5 3,249,972 - AO353_14670 0.40 +0.5 3,250,196 + AO353_14670 0.52 -1.0 3,250,196 + AO353_14670 0.52 -0.1 3,250,196 + AO353_14670 0.52 -0.9 3,250,196 + AO353_14670 0.52 +0.9 3,250,197 - AO353_14670 0.52 -2.6 3,250,197 - AO353_14670 0.52 -0.8 3,250,197 - AO353_14670 0.52 +1.7 3,250,197 - AO353_14670 0.52 -0.7 3,250,232 + AO353_14670 0.54 +1.6 3,250,319 + AO353_14670 0.59 +0.7 3,250,319 + AO353_14670 0.59 +0.5 3,250,319 + AO353_14670 0.59 -0.1 3,250,319 + AO353_14670 0.59 +2.5 3,250,319 + AO353_14670 0.59 -1.6 3,250,319 + AO353_14670 0.59 -0.4 3,250,319 + AO353_14670 0.59 +0.5 3,250,319 + AO353_14670 0.59 +0.3 3,250,319 + AO353_14670 0.59 +0.1 3,250,319 + AO353_14670 0.59 +1.7 3,250,320 - AO353_14670 0.59 +0.2 3,250,320 - AO353_14670 0.59 -0.1 3,250,320 - AO353_14670 0.59 -0.8 3,250,320 - AO353_14670 0.59 -1.0 3,250,320 - AO353_14670 0.59 +0.3 3,250,320 - AO353_14670 0.59 -1.8 3,250,320 - AO353_14670 0.59 -0.1 3,250,320 - AO353_14670 0.59 +0.3 3,250,389 + AO353_14670 0.63 +0.8 3,250,389 + AO353_14670 0.63 +0.1 3,250,389 + AO353_14670 0.63 -0.9 3,250,389 + AO353_14670 0.63 +0.1 3,250,389 + AO353_14670 0.63 +1.2 3,250,389 + AO353_14670 0.63 -0.1 3,250,390 - AO353_14670 0.63 -0.5 3,250,390 - AO353_14670 0.63 +0.4 3,250,390 - AO353_14670 0.63 -0.4 3,250,390 - AO353_14670 0.63 -0.1 3,250,390 - AO353_14670 0.63 +0.1 3,250,390 - AO353_14670 0.63 -1.7 3,250,427 + AO353_14670 0.65 -0.1 3,250,427 + AO353_14670 0.65 -0.6 3,250,428 - AO353_14670 0.65 +1.6 3,250,428 - AO353_14670 0.65 -0.6 3,250,428 - AO353_14670 0.65 -0.1 3,250,428 - AO353_14670 0.65 +1.1 3,250,428 - AO353_14670 0.65 -0.2 3,250,428 - AO353_14670 0.65 -0.9 3,250,428 - AO353_14670 0.65 +0.7 3,250,479 + AO353_14670 0.67 +0.6 3,250,479 + AO353_14670 0.67 +1.1 3,250,480 - AO353_14670 0.67 +0.9 3,250,480 - AO353_14670 0.67 +1.6 3,250,480 - AO353_14670 0.67 +1.9 3,250,480 - AO353_14670 0.67 -1.2 3,250,480 - AO353_14670 0.67 +0.9 3,250,480 - AO353_14670 0.67 -0.1 3,250,480 - AO353_14670 0.67 -1.0 3,250,480 - AO353_14670 0.67 -1.7 3,250,715 + AO353_14670 0.80 -1.1 3,250,715 + AO353_14670 0.80 +1.5 3,250,715 + AO353_14670 0.80 -0.2 3,250,716 - AO353_14670 0.80 +0.6 3,250,716 - AO353_14670 0.80 +0.5 3,250,716 - AO353_14670 0.80 -0.9 3,250,910 + -1.1 3,250,911 - +0.8 3,251,120 + +1.2 3,251,120 + -0.9 3,251,120 + +0.1 3,251,120 + -0.6 3,251,120 + +0.2 3,251,120 + +0.7 3,251,121 - +0.5 3,251,121 - +0.9 3,251,121 - -0.5 3,251,121 - -0.4 3,251,121 - +0.9 3,251,121 - +1.0 3,251,121 - +0.5 3,251,121 - -0.9 3,251,213 - -1.1 3,251,213 - -0.5 3,251,227 + +0.3 3,251,227 + -0.0 3,251,227 + -1.0 3,251,227 + +0.6 3,251,227 + +0.5 3,251,227 + -1.5 3,251,253 - +0.8 3,251,486 + AO353_14675 0.20 -1.4 3,251,487 - AO353_14675 0.20 -1.5 3,251,487 - AO353_14675 0.20 -1.0 3,251,487 - AO353_14675 0.20 -1.2 3,251,678 + AO353_14675 0.37 +0.3 3,251,678 + AO353_14675 0.37 -1.6 3,251,678 + AO353_14675 0.37 -0.4 3,251,678 + AO353_14675 0.37 -0.9 3,251,679 - AO353_14675 0.37 -0.7 3,251,679 - AO353_14675 0.37 -0.2 3,251,699 + AO353_14675 0.39 -0.7 3,251,699 + AO353_14675 0.39 -0.3 3,251,699 + AO353_14675 0.39 -1.6 3,251,699 + AO353_14675 0.39 -0.9 3,251,699 + AO353_14675 0.39 +1.6 3,251,700 - AO353_14675 0.39 +1.2 3,251,700 - AO353_14675 0.39 -0.9 3,251,700 - AO353_14675 0.39 -0.0 3,251,700 - AO353_14675 0.39 +0.1 3,251,715 + AO353_14675 0.40 -0.5 3,251,716 - AO353_14675 0.40 +0.8 3,251,716 - AO353_14675 0.40 +0.9 3,251,716 - AO353_14675 0.40 +0.9 3,251,763 + AO353_14675 0.45 -0.4 3,251,763 + AO353_14675 0.45 -1.0 3,251,763 + AO353_14675 0.45 +1.1 3,251,764 - AO353_14675 0.45 +0.6 3,251,764 - AO353_14675 0.45 -0.4 3,251,764 - AO353_14675 0.45 -0.1 3,251,764 - AO353_14675 0.45 +0.3 3,251,837 + AO353_14675 0.51 +0.6 3,251,838 - AO353_14675 0.51 -0.2 3,251,838 - AO353_14675 0.51 +0.6 3,251,951 + AO353_14675 0.62 -0.4 3,251,951 + AO353_14675 0.62 +0.8 3,251,952 - AO353_14675 0.62 +0.1 3,251,990 + AO353_14675 0.65 -1.4 3,251,990 + AO353_14675 0.65 +0.5 3,251,991 - AO353_14675 0.65 +0.9 3,251,991 - AO353_14675 0.65 -1.0 3,252,020 + AO353_14675 0.68 +1.5 3,252,021 - AO353_14675 0.68 +0.3 3,252,021 - AO353_14675 0.68 -0.7 3,252,035 + AO353_14675 0.69 -0.0 3,252,035 + AO353_14675 0.69 -0.4 3,252,035 + AO353_14675 0.69 +0.1 3,252,036 - AO353_14675 0.69 -0.2 3,252,036 - AO353_14675 0.69 +1.5 3,252,036 - AO353_14675 0.69 +0.9 3,252,036 - AO353_14675 0.69 +0.1 3,252,036 - AO353_14675 0.69 +0.7 3,252,036 - AO353_14675 0.69 +0.0
Or see this region's nucleotide sequence