Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13130 and AO353_13135 overlap by 4 nucleotides AO353_13135 and AO353_13140 overlap by 1 nucleotides
AO353_13130: AO353_13130 - N-acetylmuramoyl-L-alanine amidase, at 2,909,180 to 2,910,616
_13130
AO353_13135: AO353_13135 - DNA mismatch repair protein, at 2,910,613 to 2,912,523
_13135
AO353_13140: AO353_13140 - tRNA dimethylallyltransferase, at 2,912,523 to 2,913,494
_13140
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7
8
9
10
11 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.411 kb on - strand, within AO353_13130 at 2910.759 kb on + strand at 2910.759 kb on + strand at 2910.759 kb on + strand at 2910.760 kb on - strand at 2911.397 kb on - strand, within AO353_13135 at 2911.459 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.673 kb on + strand, within AO353_13135 at 2911.673 kb on + strand, within AO353_13135 at 2911.776 kb on + strand, within AO353_13135 at 2911.776 kb on + strand, within AO353_13135 at 2911.777 kb on - strand, within AO353_13135 at 2911.777 kb on - strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.780 kb on - strand, within AO353_13135 at 2911.780 kb on - strand, within AO353_13135 at 2911.816 kb on + strand, within AO353_13135 at 2911.817 kb on - strand, within AO353_13135 at 2911.817 kb on - strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.938 kb on + strand, within AO353_13135 at 2911.938 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.367 kb on + strand at 2912.545 kb on + strand at 2912.807 kb on + strand, within AO353_13140 at 2912.838 kb on + strand, within AO353_13140 at 2912.839 kb on - strand, within AO353_13140 at 2912.841 kb on + strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2913.050 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.180 kb on - strand, within AO353_13140 at 2913.183 kb on - strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.277 kb on + strand, within AO353_13140 at 2913.278 kb on - strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.287 kb on - strand, within AO353_13140 at 2913.415 kb on + strand at 2913.465 kb on + strand at 2913.513 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,910,410 + AO353_13130 0.86 +0.7 2,910,410 + AO353_13130 0.86 -0.7 2,910,410 + AO353_13130 0.86 -0.9 2,910,410 + AO353_13130 0.86 -0.7 2,910,410 + AO353_13130 0.86 -0.4 2,910,410 + AO353_13130 0.86 -0.0 2,910,410 + AO353_13130 0.86 -1.1 2,910,411 - AO353_13130 0.86 +0.3 2,910,759 + +0.8 2,910,759 + +1.6 2,910,759 + +1.6 2,910,760 - +1.0 2,911,397 - AO353_13135 0.41 -0.2 2,911,459 + AO353_13135 0.44 +0.1 2,911,600 + AO353_13135 0.52 +0.3 2,911,600 + AO353_13135 0.52 -0.5 2,911,600 + AO353_13135 0.52 -0.9 2,911,601 - AO353_13135 0.52 -0.2 2,911,601 - AO353_13135 0.52 -0.6 2,911,601 - AO353_13135 0.52 +1.5 2,911,673 + AO353_13135 0.55 +1.1 2,911,673 + AO353_13135 0.55 +1.4 2,911,776 + AO353_13135 0.61 -0.1 2,911,776 + AO353_13135 0.61 -0.1 2,911,777 - AO353_13135 0.61 +1.4 2,911,777 - AO353_13135 0.61 -0.4 2,911,779 + AO353_13135 0.61 +0.4 2,911,779 + AO353_13135 0.61 -0.0 2,911,779 + AO353_13135 0.61 +0.1 2,911,780 - AO353_13135 0.61 +1.6 2,911,780 - AO353_13135 0.61 +2.2 2,911,816 + AO353_13135 0.63 +0.1 2,911,817 - AO353_13135 0.63 +1.2 2,911,817 - AO353_13135 0.63 +0.4 2,911,822 + AO353_13135 0.63 -0.6 2,911,822 + AO353_13135 0.63 -0.0 2,911,822 + AO353_13135 0.63 -0.2 2,911,822 + AO353_13135 0.63 +2.0 2,911,822 + AO353_13135 0.63 -0.7 2,911,822 + AO353_13135 0.63 -0.7 2,911,823 - AO353_13135 0.63 +1.1 2,911,823 - AO353_13135 0.63 +1.3 2,911,823 - AO353_13135 0.63 +1.3 2,911,823 - AO353_13135 0.63 +1.6 2,911,938 + AO353_13135 0.69 -1.3 2,911,938 + AO353_13135 0.69 -0.6 2,911,981 + AO353_13135 0.72 +1.3 2,911,981 + AO353_13135 0.72 -0.6 2,911,981 + AO353_13135 0.72 -0.1 2,911,981 + AO353_13135 0.72 -0.6 2,911,981 + AO353_13135 0.72 -0.5 2,911,981 + AO353_13135 0.72 -0.0 2,911,981 + AO353_13135 0.72 -0.6 2,911,981 + AO353_13135 0.72 -0.8 2,911,981 + AO353_13135 0.72 -0.3 2,911,982 - AO353_13135 0.72 +0.6 2,911,982 - AO353_13135 0.72 +2.3 2,911,982 - AO353_13135 0.72 +0.5 2,911,982 - AO353_13135 0.72 -0.0 2,911,982 - AO353_13135 0.72 +0.5 2,911,982 - AO353_13135 0.72 +0.1 2,911,982 - AO353_13135 0.72 +0.6 2,911,982 - AO353_13135 0.72 +1.7 2,911,982 - AO353_13135 0.72 +1.3 2,911,982 - AO353_13135 0.72 +1.6 2,911,982 - AO353_13135 0.72 -0.0 2,911,982 - AO353_13135 0.72 +1.4 2,911,982 - AO353_13135 0.72 +0.6 2,912,050 + AO353_13135 0.75 +0.4 2,912,050 + AO353_13135 0.75 -0.2 2,912,050 + AO353_13135 0.75 +11.5 2,912,050 + AO353_13135 0.75 -0.9 2,912,050 + AO353_13135 0.75 +0.8 2,912,050 + AO353_13135 0.75 -0.2 2,912,050 + AO353_13135 0.75 +1.2 2,912,050 + AO353_13135 0.75 +1.6 2,912,050 + AO353_13135 0.75 +0.1 2,912,050 + AO353_13135 0.75 -0.5 2,912,051 - AO353_13135 0.75 -1.4 2,912,051 - AO353_13135 0.75 -0.4 2,912,051 - AO353_13135 0.75 +2.2 2,912,051 - AO353_13135 0.75 +1.0 2,912,051 - AO353_13135 0.75 +2.3 2,912,279 + AO353_13135 0.87 -0.7 2,912,279 + AO353_13135 0.87 +0.2 2,912,279 + AO353_13135 0.87 -0.2 2,912,279 + AO353_13135 0.87 -0.5 2,912,280 - AO353_13135 0.87 +0.1 2,912,280 - AO353_13135 0.87 +1.0 2,912,280 - AO353_13135 0.87 +2.2 2,912,367 + -1.0 2,912,545 + -0.9 2,912,807 + AO353_13140 0.29 +0.9 2,912,838 + AO353_13140 0.32 +2.6 2,912,839 - AO353_13140 0.33 -1.0 2,912,841 + AO353_13140 0.33 +1.6 2,912,842 - AO353_13140 0.33 +0.3 2,912,842 - AO353_13140 0.33 +0.6 2,912,842 - AO353_13140 0.33 +0.7 2,912,842 - AO353_13140 0.33 +0.3 2,912,842 - AO353_13140 0.33 +1.4 2,912,842 - AO353_13140 0.33 -0.4 2,913,050 + AO353_13140 0.54 -1.2 2,913,125 + AO353_13140 0.62 -0.7 2,913,125 + AO353_13140 0.62 -0.7 2,913,126 - AO353_13140 0.62 -0.4 2,913,126 - AO353_13140 0.62 +1.4 2,913,126 - AO353_13140 0.62 +2.0 2,913,180 - AO353_13140 0.68 +2.2 2,913,183 - AO353_13140 0.68 +0.9 2,913,242 + AO353_13140 0.74 +0.6 2,913,242 + AO353_13140 0.74 -1.4 2,913,242 + AO353_13140 0.74 -0.2 2,913,277 + AO353_13140 0.78 -0.2 2,913,278 - AO353_13140 0.78 +3.0 2,913,286 + AO353_13140 0.78 -0.2 2,913,286 + AO353_13140 0.78 +1.4 2,913,287 - AO353_13140 0.79 +1.2 2,913,415 + -0.9 2,913,465 + -1.6 2,913,513 + +0.1
Or see this region's nucleotide sequence