Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11320 and AO353_11325 are separated by 2 nucleotides AO353_11325 and AO353_11330 are separated by 214 nucleotides AO353_11330 and AO353_11335 are separated by 147 nucleotides AO353_11335 and AO353_11340 are separated by 382 nucleotides
AO353_11320: AO353_11320 - hypothetical protein, at 2,502,351 to 2,503,109
_11320
AO353_11325: AO353_11325 - serine protease, at 2,503,112 to 2,503,648
_11325
AO353_11330: AO353_11330 - hypothetical protein, at 2,503,863 to 2,504,324
_11330
AO353_11335: AO353_11335 - hypothetical protein, at 2,504,472 to 2,504,717
_11335
AO353_11340: AO353_11340 - MarR family transcriptional regulator, at 2,505,100 to 2,505,531
_11340
Position (kb)
2503
2504
2505 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2502.903 kb on + strand, within AO353_11320 at 2502.904 kb on - strand, within AO353_11320 at 2502.904 kb on - strand, within AO353_11320 at 2503.027 kb on + strand, within AO353_11320 at 2503.488 kb on + strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.489 kb on - strand, within AO353_11325 at 2503.525 kb on + strand, within AO353_11325 at 2503.525 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.529 kb on + strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.530 kb on - strand, within AO353_11325 at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.629 kb on + strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.630 kb on - strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.699 kb on + strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.700 kb on - strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.701 kb on + strand at 2503.702 kb on - strand at 2503.702 kb on - strand at 2503.702 kb on - strand at 2503.702 kb on - strand at 2503.706 kb on + strand at 2503.706 kb on + strand at 2503.706 kb on + strand at 2503.706 kb on + strand at 2503.706 kb on + strand at 2503.707 kb on - strand at 2503.707 kb on - strand at 2503.707 kb on - strand at 2503.707 kb on - strand at 2503.707 kb on - strand at 2503.707 kb on - strand at 2503.767 kb on + strand at 2503.767 kb on + strand at 2503.768 kb on - strand at 2503.792 kb on + strand at 2503.792 kb on + strand at 2503.799 kb on + strand at 2503.800 kb on - strand at 2503.820 kb on + strand at 2503.821 kb on - strand at 2503.868 kb on + strand at 2503.869 kb on - strand at 2503.869 kb on - strand at 2503.869 kb on - strand at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.921 kb on + strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2503.922 kb on - strand, within AO353_11330 at 2504.028 kb on + strand, within AO353_11330 at 2504.028 kb on + strand, within AO353_11330 at 2504.175 kb on + strand, within AO353_11330 at 2504.175 kb on + strand, within AO353_11330 at 2504.175 kb on + strand, within AO353_11330 at 2504.176 kb on - strand, within AO353_11330 at 2504.226 kb on + strand, within AO353_11330 at 2504.226 kb on + strand, within AO353_11330 at 2504.226 kb on + strand, within AO353_11330 at 2504.226 kb on + strand, within AO353_11330 at 2504.227 kb on - strand, within AO353_11330 at 2504.227 kb on - strand, within AO353_11330 at 2504.227 kb on - strand, within AO353_11330 at 2504.227 kb on - strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.257 kb on + strand, within AO353_11330 at 2504.258 kb on - strand, within AO353_11330 at 2504.258 kb on - strand, within AO353_11330 at 2504.277 kb on + strand, within AO353_11330 at 2504.277 kb on + strand, within AO353_11330 at 2504.305 kb on + strand at 2504.305 kb on + strand at 2504.305 kb on + strand at 2504.305 kb on + strand at 2504.306 kb on - strand at 2504.323 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.330 kb on - strand at 2504.335 kb on - strand at 2504.449 kb on + strand at 2504.449 kb on + strand at 2504.483 kb on + strand at 2504.484 kb on - strand at 2504.715 kb on + strand at 2504.715 kb on + strand at 2504.716 kb on - strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.749 kb on + strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.750 kb on - strand at 2504.878 kb on - strand at 2504.890 kb on + strand at 2504.891 kb on - strand at 2504.891 kb on - strand at 2504.891 kb on - strand at 2504.904 kb on + strand at 2504.904 kb on + strand at 2504.904 kb on + strand at 2504.905 kb on - strand at 2504.905 kb on - strand at 2504.905 kb on - strand at 2504.905 kb on - strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.906 kb on + strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.907 kb on - strand at 2504.988 kb on - strand at 2505.173 kb on - strand, within AO353_11340 at 2505.173 kb on - strand, within AO353_11340 at 2505.173 kb on - strand, within AO353_11340 at 2505.316 kb on + strand, within AO353_11340
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,502,903 + AO353_11320 0.73 -1.0 2,502,904 - AO353_11320 0.73 -1.2 2,502,904 - AO353_11320 0.73 -1.1 2,503,027 + AO353_11320 0.89 +1.0 2,503,488 + AO353_11325 0.70 -0.7 2,503,489 - AO353_11325 0.70 +0.4 2,503,489 - AO353_11325 0.70 +0.3 2,503,489 - AO353_11325 0.70 +1.0 2,503,489 - AO353_11325 0.70 -0.1 2,503,489 - AO353_11325 0.70 -1.4 2,503,489 - AO353_11325 0.70 -2.6 2,503,525 + AO353_11325 0.77 +0.2 2,503,525 + AO353_11325 0.77 +1.9 2,503,529 + AO353_11325 0.78 -0.6 2,503,529 + AO353_11325 0.78 +0.8 2,503,529 + AO353_11325 0.78 +2.1 2,503,529 + AO353_11325 0.78 +0.7 2,503,529 + AO353_11325 0.78 -1.2 2,503,529 + AO353_11325 0.78 -1.4 2,503,529 + AO353_11325 0.78 +0.8 2,503,529 + AO353_11325 0.78 -1.8 2,503,529 + AO353_11325 0.78 -0.7 2,503,529 + AO353_11325 0.78 -0.3 2,503,529 + AO353_11325 0.78 -1.0 2,503,529 + AO353_11325 0.78 -1.1 2,503,529 + AO353_11325 0.78 +1.2 2,503,530 - AO353_11325 0.78 +2.8 2,503,530 - AO353_11325 0.78 -0.2 2,503,530 - AO353_11325 0.78 -0.0 2,503,530 - AO353_11325 0.78 -0.9 2,503,530 - AO353_11325 0.78 +1.0 2,503,530 - AO353_11325 0.78 +1.8 2,503,530 - AO353_11325 0.78 -1.3 2,503,530 - AO353_11325 0.78 +1.0 2,503,530 - AO353_11325 0.78 +1.2 2,503,530 - AO353_11325 0.78 -0.3 2,503,530 - AO353_11325 0.78 +0.0 2,503,530 - AO353_11325 0.78 +0.1 2,503,629 + -0.6 2,503,629 + +0.7 2,503,629 + +0.6 2,503,629 + +0.1 2,503,629 + +0.4 2,503,629 + +1.8 2,503,629 + +1.2 2,503,629 + -0.6 2,503,629 + +0.8 2,503,629 + -0.5 2,503,629 + -0.6 2,503,629 + -0.7 2,503,630 - -0.0 2,503,630 - +0.2 2,503,630 - -0.0 2,503,630 - +0.4 2,503,630 - +0.2 2,503,630 - +1.8 2,503,630 - -0.1 2,503,630 - +0.1 2,503,630 - -0.7 2,503,699 + -0.2 2,503,699 + +1.0 2,503,699 + +1.8 2,503,699 + -0.7 2,503,699 + +0.7 2,503,699 + +0.0 2,503,699 + -0.2 2,503,699 + -1.2 2,503,699 + +1.5 2,503,699 + -1.5 2,503,699 + -0.2 2,503,699 + +0.1 2,503,699 + +1.4 2,503,699 + +0.2 2,503,699 + -1.0 2,503,699 + -0.0 2,503,700 - +0.8 2,503,700 - -0.0 2,503,700 - +1.2 2,503,700 - -1.3 2,503,700 - -0.8 2,503,700 - -0.8 2,503,700 - -1.0 2,503,700 - +0.2 2,503,700 - +1.5 2,503,700 - +0.0 2,503,700 - -0.3 2,503,700 - -0.8 2,503,700 - +0.6 2,503,700 - +1.8 2,503,700 - -1.7 2,503,700 - -1.3 2,503,700 - -0.4 2,503,700 - -0.1 2,503,701 + -0.2 2,503,701 + -0.4 2,503,701 + +0.5 2,503,701 + +0.1 2,503,701 + -0.6 2,503,701 + +0.4 2,503,701 + -0.6 2,503,701 + -0.3 2,503,701 + -0.2 2,503,701 + +1.8 2,503,701 + -1.4 2,503,701 + -0.8 2,503,701 + -0.9 2,503,701 + -0.4 2,503,702 - -0.4 2,503,702 - +1.4 2,503,702 - -0.8 2,503,702 - -1.0 2,503,706 + +1.8 2,503,706 + +0.6 2,503,706 + +1.2 2,503,706 + +0.2 2,503,706 + +1.2 2,503,707 - +1.8 2,503,707 - +3.4 2,503,707 - -0.2 2,503,707 - +0.4 2,503,707 - -1.7 2,503,707 - -1.0 2,503,767 + -0.9 2,503,767 + -0.4 2,503,768 - -0.9 2,503,792 + +1.4 2,503,792 + +0.9 2,503,799 + -0.7 2,503,800 - +0.5 2,503,820 + -1.7 2,503,821 - -0.6 2,503,868 + -1.4 2,503,869 - +0.3 2,503,869 - +0.9 2,503,869 - -0.0 2,503,921 + AO353_11330 0.13 +0.3 2,503,921 + AO353_11330 0.13 +0.4 2,503,921 + AO353_11330 0.13 +0.6 2,503,921 + AO353_11330 0.13 +0.9 2,503,921 + AO353_11330 0.13 -0.8 2,503,921 + AO353_11330 0.13 +0.4 2,503,921 + AO353_11330 0.13 -0.2 2,503,922 - AO353_11330 0.13 +0.8 2,503,922 - AO353_11330 0.13 -0.0 2,503,922 - AO353_11330 0.13 -0.2 2,503,922 - AO353_11330 0.13 +0.4 2,503,922 - AO353_11330 0.13 -0.2 2,503,922 - AO353_11330 0.13 -0.8 2,503,922 - AO353_11330 0.13 -0.3 2,503,922 - AO353_11330 0.13 -0.4 2,503,922 - AO353_11330 0.13 -0.4 2,503,922 - AO353_11330 0.13 -0.6 2,504,028 + AO353_11330 0.36 +4.8 2,504,028 + AO353_11330 0.36 +0.4 2,504,175 + AO353_11330 0.68 +0.5 2,504,175 + AO353_11330 0.68 +1.2 2,504,175 + AO353_11330 0.68 +2.2 2,504,176 - AO353_11330 0.68 +3.4 2,504,226 + AO353_11330 0.79 +0.2 2,504,226 + AO353_11330 0.79 +1.0 2,504,226 + AO353_11330 0.79 -0.5 2,504,226 + AO353_11330 0.79 +0.1 2,504,227 - AO353_11330 0.79 -0.8 2,504,227 - AO353_11330 0.79 +0.8 2,504,227 - AO353_11330 0.79 +2.2 2,504,227 - AO353_11330 0.79 +0.4 2,504,257 + AO353_11330 0.85 -0.3 2,504,257 + AO353_11330 0.85 +1.0 2,504,257 + AO353_11330 0.85 +0.8 2,504,257 + AO353_11330 0.85 -0.4 2,504,257 + AO353_11330 0.85 +1.3 2,504,257 + AO353_11330 0.85 -0.3 2,504,257 + AO353_11330 0.85 +1.2 2,504,257 + AO353_11330 0.85 -0.2 2,504,258 - AO353_11330 0.85 +0.5 2,504,258 - AO353_11330 0.85 +0.7 2,504,277 + AO353_11330 0.90 -1.0 2,504,277 + AO353_11330 0.90 -0.7 2,504,305 + -0.0 2,504,305 + +0.3 2,504,305 + -0.6 2,504,305 + -0.5 2,504,306 - -0.0 2,504,323 - +0.8 2,504,330 - +0.8 2,504,330 - +1.4 2,504,330 - -1.5 2,504,330 - -2.1 2,504,330 - -0.6 2,504,330 - +0.4 2,504,330 - +1.5 2,504,330 - +1.2 2,504,330 - +1.0 2,504,330 - -0.7 2,504,330 - +0.2 2,504,330 - -0.8 2,504,330 - +0.2 2,504,330 - -0.6 2,504,330 - -0.0 2,504,335 - -0.1 2,504,449 + -0.4 2,504,449 + -0.0 2,504,483 + +0.5 2,504,484 - +0.7 2,504,715 + -1.8 2,504,715 + -0.2 2,504,716 - +1.3 2,504,749 + +0.2 2,504,749 + +1.0 2,504,749 + -0.0 2,504,749 + -0.2 2,504,749 + -1.6 2,504,749 + -0.0 2,504,749 + +1.8 2,504,749 + +1.6 2,504,749 + -0.4 2,504,750 - +0.8 2,504,750 - -0.8 2,504,750 - -0.0 2,504,750 - +1.0 2,504,750 - +1.0 2,504,750 - -0.0 2,504,750 - -0.6 2,504,750 - -0.4 2,504,750 - +0.8 2,504,750 - -0.3 2,504,750 - -0.3 2,504,750 - +1.8 2,504,750 - -1.4 2,504,750 - -1.6 2,504,750 - +0.3 2,504,750 - -1.9 2,504,750 - +0.2 2,504,878 - -0.4 2,504,890 + +1.2 2,504,891 - -0.0 2,504,891 - +0.2 2,504,891 - -0.3 2,504,904 + -0.9 2,504,904 + +0.4 2,504,904 + +2.8 2,504,905 - +0.6 2,504,905 - +0.4 2,504,905 - -0.7 2,504,905 - +1.1 2,504,906 + +0.9 2,504,906 + +0.4 2,504,906 + -0.0 2,504,906 + +1.4 2,504,906 + +1.0 2,504,906 + -1.8 2,504,906 + -2.0 2,504,906 + +2.2 2,504,906 + -1.2 2,504,906 + +0.4 2,504,906 + +1.0 2,504,906 + -1.2 2,504,906 + -0.7 2,504,906 + -0.5 2,504,906 + -1.3 2,504,906 + +1.2 2,504,906 + +1.5 2,504,906 + -0.6 2,504,907 - +0.0 2,504,907 - -0.0 2,504,907 - +0.6 2,504,907 - -0.2 2,504,907 - -0.4 2,504,907 - +0.8 2,504,907 - -0.0 2,504,907 - -1.1 2,504,907 - +0.6 2,504,907 - -0.4 2,504,907 - +0.8 2,504,907 - +1.2 2,504,907 - -0.5 2,504,907 - -0.0 2,504,907 - -1.1 2,504,907 - +1.0 2,504,907 - -0.9 2,504,907 - -0.4 2,504,907 - -0.3 2,504,907 - -0.4 2,504,907 - +0.7 2,504,988 - +0.9 2,505,173 - AO353_11340 0.17 -0.0 2,505,173 - AO353_11340 0.17 -0.3 2,505,173 - AO353_11340 0.17 -0.6 2,505,316 + AO353_11340 0.50 +0.6
Or see this region's nucleotide sequence